EY662375

Overview
NameEY662375
Unique NameEY662375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662375 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.645e-51
Identity = 104/164 (63.41%), Postives = 120/164 (73.17%), Query Frame = 2
Query:   98 GAKMTVNLEVDLEGGDGER-LYPGLSYGENQLRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPILFTS 586
            G   +   ++DLE G GE  LYPGLSYGENQLRWGFIRKVYGIL+AQ++LTTL+S++ VL  P+ND                       H+YHQKHPVNLI+L LFTVSLS  V VSCA T+GRIVL+ALILT +VV SLT YTFWA+KKGKDFSFLGPILFTS
Sbjct:   14 GIDRSAGKDIDLEMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLLTGSPGILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTS 177          
BLAST of EY662375 vs. ExPASy Swiss-Prot
Match: TMBI4_MOUSE (Transmembrane BAX inhibitor motif-containing protein 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = 2
Query:  188 LRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPILF 580
            +R  F+RKVY IL+ Q++LTT+ S++ + +  +                          ++   HP+NL +L  FT+S SL VA      D  +VL+A I+T+AV   LT YT    +  +DF+  G  LF
Sbjct:   30 IRMAFLRKVYSILSLQVLLTTVTSALFLYFQALRTFVHESPALIVVFALGSLGLIFALTLHRHTHPLNLYLLFAFTLSESLAVAAVVTFYDVYLVLQAFIMTTAVFLGLTAYTL---QSKRDFTKFGAGLF 157          
The following BLAST results are available for this feature:
BLAST of EY662375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
BI1L_ARATH2.645e-5163.41BI1-like protein OS=Arabidopsis thaliana GN=At4g15... [more]
TMBI4_MOUSE7.787e-1132.06Transmembrane BAX inhibitor motif-containing prote... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662375 ID=EY662375; Name=EY662375; organism=Citrus sinensis; type=EST; length=588bp
CCTGGTCGCCTGCGGACCGGTCCGGATTCCCTCCTCGACCCCGCGTCCGA
AATTCAATTTCCAATCGCTTGAAAGATGTTGGGCTACGAGACGGTGAGGA
GCAAAGATGACGGTAAATCTCGAGGTAGATCTGGAAGGCGGAGATGGGGA
GAGGCTTTACCCCGGTCTCAGCTACGGCGAGAACCAGCTCCGATGGGGTT
TCATTCGCAAGGTGTACGGCATCTTGACGGCCCAGATCGTTTTGACCACC
TTGGTCTCCTCAATCACCGTTCTTTACAATCCCATCAACGATCTTCTCAG
GGGCAATTCTGGCCTTCTCCTCTTCCTCTCCATCCTCCCCTTCATCCTGT
TATGGCCACTGCATGTGTATCATCAGAAGCACCCTGTGAACTTGATTGTC
CTTGGTCTCTTCACTGTATCTCTGAGTCTTCCTGTTGCTGTAAGCTGTGC
TAATACCGATGGTAGGATTGTGCTTGAAGCATTAATTCTGACCTCGGCTG
TGGTTTGTTCTTTAACTGGGTACACTTTCTGGGCCTCTAAGAAGGGCAAA
GACTTCAGCTTTCTTGGACCAATTCTATTCACCAGCCT
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