CX046578

Overview
NameCX046578
Unique NameCX046578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL27_ARATH (Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.842e-28
Identity = 87/277 (31.41%), Postives = 149/277 (53.79%), Query Frame = -2
Query:    2 KWLVNANESIEQAAKFIQDEEKANDGRCLMGLFPDWFARYHHGKKAETEKEALFKLREEAGRFDDRISYRTVPEDIWLKSHKGYEAFESRLST--LKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEV---ARQAMADKLFDTVVFSEVSQTPDIKKIQQEIAEKLGLELH-EEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGDYVENRELKPIATRVAK 814
            +W   A E I +A   ++ EE+ + G  L         R    +K     + +  L ++   F D +S  + PE +  +   G       +++  L  I++ L       IGV+GMGG+GKTTLV+ +    R+  A + F  V+F  VS+  D +++Q++IAE+L ++   EE E + A R+   L  E+K L+ILD++WKP+DL  +GIP   E++G K++ T+R L+V    +++ +  +  L E++AW LF   AGD V +  ++ IA  V++
Sbjct:   70 RWQREAEEVISKAR--LKLEERVSCGMSL---------RPRMSRKLVKILDEVKMLEKDGIEFVDMLSVESTPERV--EHVPGVSVVHQTMASNMLAKIRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEVCRSMKTDLDVRVDCLLEEDAWELFCKNAGDVVRSDHVRKIAKAVSQ 333          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL28_ARATH (Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.479e-26
Identity = 66/187 (35.29%), Postives = 111/187 (59.36%), Query Frame = -2
Query:    5 ESRLSTLKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQAM---ADKLFDTVVFSEVSQTPDIKKIQQEIAEKLGLELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEH-RGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGDYVENRELKPIATRVA 553
            ++ L  L  +++ L   +V  IGV+GMGG+GKTTLV+ +    +   A + F  V++  VS+  D+K++Q +IA++LG     E  ++    +CERL + K  L+ILD++W P+DL  +GIP  +E  +  K++ T+R L+V  +  + +N  +  L E+EAW LF    G+   +  +KPIA  V+
Sbjct:  116 KTALEMLDKLKDCLKKKNVQKIGVWGMGGVGKTTLVRTLNNDLLKYAATQQFALVIWVTVSKDFDLKRVQMDIAKRLGKRFTREQMNQLGLTICERLIDLKNFLLILDDVWHPIDLDQLGIPLALERSKDSKVVLTSRRLEVCQQMMTNENIKVACLQEKEAWELFCHNVGEVANSDNVKPIAKDVS 302          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL16_ARATH (Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana GN=At1g61190 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.060e-24
Identity = 85/264 (32.20%), Postives = 133/264 (50.38%), Query Frame = -2
Query:   50 ENVEKWLVNANESIEQAAKFIQDEEKANDGRCLMGLFPDWF-ARYHHGKKAETEKEALFKLREEAGRFDDRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQ-AMADKLFDTVVFSEVSQTPDIKKIQQEIAEKLGL---ELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGD 826
            E V+ WL   N    +    +          CL GL   +  + Y +GK+     E + KL+ E G FD+ +S      ++     +  +    +   LK   N L+   V I+G++GMGG+GKTTL +++  + A     FD V++  VSQ   + K+Q++IAEKL L       + ES +A+ +   LK  K+ +++LD+IW+ +DL  IGIP+  E   CK+ FTTRD  V  +    K   +  L  ++AW LFK   GD
Sbjct:   68 EAVQVWLDRVNSIDIECKDLLSVSPVELQKLCLCGLCSKYVCSSYKYGKRVFLLLEEVTKLKSE-GNFDE-VSQPPPRSEV---EERPTQPTIGQEEMLKKAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKG-KRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRDQKVCGQMGDHKPMQVKCLEPEDAWELFKNKVGD 325          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL33_ARATH (Probable disease resistance protein At5g43740 OS=Arabidopsis thaliana GN=At5g43740 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.384e-24
Identity = 80/282 (28.37%), Postives = 146/282 (51.77%), Query Frame = -2
Query:    5 VEKWLVNANESIEQAAKFIQDEEKANDGR-CLMGLFP-DWFARYHHGKKAETEKEALFKLREEAGRFDDRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQNA---LIVVDVSIIGVYGMGGIGKTTLVQEVARQAMA-DKLFDTVVFSEVSQTPDIKKIQQEIAEKL--GLELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGDYV--ENRELKPIATRVA 820
            V  WL    + +E   K + +      GR CL+G    D  + Y++G+K         K+ EE      +  +R V ++I  K  K  +  ++ +   K ++ A   L+  ++  +G+YGMGG+GKTTL++ +  + +  +  FD V++  VS+    + IQ +I  +L    E   E ES++AS +   L+  KK +++LD++W  +D+  IG+P      G K++FTTR  +V    +++K   +  L+  EAW LF++  GD +   ++++  +A  VA
Sbjct:   69 VNGWLSRV-QIVESEFKDLLEAMSIETGRLCLLGYCSEDCISSYNYGEKVS-------KMLEEVKELLSKKDFRMVAQEIIHKVEK--KLIQTTVGLDKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQILGRLRSDKEWERETESKKASLIYNNLER-KKFVLLLDDLWSEVDMTKIGVPPPTRENGSKIVFTTRSTEVCKHMKADKQIKVACLSPDEAWELFRLTVGDIILRSHQDIPALARIVA 339          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL32_ARATH (Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.384e-24
Identity = 84/280 (30.00%), Postives = 143/280 (51.07%), Query Frame = -2
Query:    5 VEKWLVNANESIEQAAKFIQDEEKANDGR-CLMGLFP-DWFARYHHGKKAETEKEALFKLREEAGRFDDRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQ-NALIVVDVSIIGVYGMGGIGKTTLVQEVARQAMA-DKLFDTVVFSEVSQTPDIKKIQQEIAEKL--GLELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGDYV--ENRELKPIATRVA 820
            V  WL    + +E   K + +      GR CL G    D  + Y++G K       + K  EE      + ++  V + I  K+ K +      L T+  I   +LI  ++  +G+YGMGGIGKTTL++ +  + +  +  FD V++  VS+   ++ IQ +I  +L    E   E ES++AS +   LK  KK +++LD++W  +DL  IG+P      G K++FTTR  +V    +++K   +  L+  EAW LF++  GD +   ++++  +A  VA
Sbjct:   70 VNGWLSRV-QIVESEFKDLLEAMSIETGRLCLFGYCSEDCISSYNYGGK-------VMKNLEEVKELLSKKNFEVVAQKIIPKAEKKHIQTTVGLDTMVGIAWESLIDDEIRTLGLYGMGGIGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQLEGIQDQILGRLRPDKEWERETESKKASLINNNLKR-KKFVLLLDDLWSEVDLIKIGVPPPSRENGSKIVFTTRSKEVCKHMKADKQIKVDCLSPDEAWELFRLTVGDIILRSHQDIPALARIVA 340          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL18_ARATH (Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana GN=At1g61310 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.410e-23
Identity = 83/264 (31.44%), Postives = 131/264 (49.62%), Query Frame = -2
Query:   50 ENVEKWLVNANESIEQAAKFIQDEEKANDGRCLMGLFPDWF-ARYHHGKKAETEKEALFKLREEAGRFDDRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQ-AMADKLFDTVVFSEVSQTPDIKKIQQEIAEKLGL---ELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGD 826
            E V+ WL   N    +    +          CL GL   +  + Y +GKK     E +  L+ E G FD+ +S      ++     +  +    +   L+   N L+   V I+G++GMGG+GKTTL +++  + A     FD V++  VSQ   + K+Q++IAEKL L       + ES +A+ +   LK  K+ +++LD+IW+ +DL  IGIP+  E   CK+ FTTR  +V       K   +  L  ++AW LFK   GD
Sbjct:   69 EAVQVWLDRVNSIDIECKDLLSVSPVELQKLCLCGLCTKYVCSSYKYGKKVFLLLEEVKILKSE-GNFDE-VSQPPPRSEV---EERPTQPTIGQEEMLEKAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAEIGGTFDIVIWIVVSQGAKLSKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKG-KRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRSREVCGEMGDHKPMQVNCLEPEDAWELFKNKVGD 326          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL15_ARATH (Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana GN=At1g61180 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.410e-23
Identity = 84/264 (31.82%), Postives = 131/264 (49.62%), Query Frame = -2
Query:   50 ENVEKWLVNANESIEQAAKFIQDEEKANDGRCLMGLFPDWF-ARYHHGKKAETEKEALFKLREEAGRFDDRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQ-AMADKLFDTVVFSEVSQTPDIKKIQQEIAEKLGL---ELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGD 826
            E V+ WL   N    +    +          CL GL   +  + Y +GKK     E + KL  E G FD+ +S      ++     +  +    +   L+   N L+   V I+G++GMGG+GKTTL +++  + A     FD V++  VS+   I K+Q++IAEKL L       + ES +A+ +   LK  K+ +++LD+IW+ +DL  IGIP+  E   CK+ FTTR  +V       K   +  L  ++AW LFK   GD
Sbjct:   67 EAVQVWLDRVNSVDIECKDLLSVTPVELQKLCLCGLCSKYVCSSYKYGKKVFLLLEEVKKLNSE-GNFDE-VSQPPPRSEV---EERPTQPTIGQEDMLEKAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAEIGGTFDIVIWIVVSKGVMISKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKG-KRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRSREVCGEMGDHKPMQVNCLEPEDAWELFKNKVGD 324          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: RPS5_ARATH (Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.816e-23
Identity = 82/283 (28.98%), Postives = 143/283 (50.53%), Query Frame = -2
Query:    2 VEKWLVNANESIEQAAKFIQDEEKANDGRCLMGLFP-DWFARYHHGKKAETEKEALFKLREEAGRFD---DRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQ-AMADKLFDTVVFSEVSQTPDIKKIQQEIAEKLGL---ELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGDYV--ENRELKPIATRVAK 820
            V+ WL +      Q    ++  E      CL G    D    Y +GK+     + +  L  + G FD   +   +  V E  +  +  G E        L+   N L+     I+G+YGMGG+GKTTL+ ++  + +  D  FD V++  VS++  ++KIQ++IAEK+GL   E  E+ +++ A  +   L+  K +L +LD+IW+ ++L  +G+P+  +  GCK+ FTTR  DV  R   +    +  L  +E+W LF++  G      + ++  +A +VA+
Sbjct:   72 VQVWLTSVLIIQNQFNDLLRSNEVELQRLCLCGFCSKDLKLSYRYGKRVIMMLKEVESLSSQ-GFFDVVSEATPFADVDEIPFQPTIVGQEIM------LEKAWNRLMEDGSGILGLYGMGGVGKTTLLTKINNKFSKIDDRFDVVIWVVVSRSSTVRKIQRDIAEKVGLGGMEWSEKNDNQIAVDIHNVLRRRKFVL-LLDDIWEKVNLKAVGVPYPSKDNGCKVAFTTRSRDVCGRMGVDDPMEVSCLQPEESWDLFQMKVGKNTLGSHPDIPGLARKVAR 346          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL38_ARATH (Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana GN=At5g47260 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.886e-22
Identity = 79/264 (29.92%), Postives = 138/264 (52.27%), Query Frame = -2
Query:   50 ENVEKWLVNANESIEQAAKFIQDEEKANDGRC----LMGLFPDWFARYHHGKKAETEKEALFKLREEAGRFDDRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQAMADKLFDTVVFSEVSQTPDIKKIQQEIAEKLGLELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTE-SEKNFSIGILNEQEAWRLFKIMAGD 826
            + V++W ++  E IE  A  + DE  +   R        L P   + Y + +K  T  E +  LR + G F+  + +R +P  +           +++L  L      L+ ++V  +G+YG GG+GKTTL+ ++  + + D  F  V+F  V    +++ IQ EI ++LGL+   E + R+A+ +   LK EK+ +++LD I + LDL  IG+PF     GCK++FTT+ L+    ++  +    I  L+ +EAW LF+   G+
Sbjct:   63 QEVKEW-ISMVEEIEPKANRLLDESVSEIQRLSRYGYCSLIPA--STYRYSEKVLTTMEGVETLRSK-GVFE-AVVHRALPPLVIKMPPIQLTVSQAKL--LDTAWARLMDINVGTLGIYGRGGVGKTTLLTKLRNKLLVDA-FGLVIFVVVG-FEEVESIQDEIGKRLGLQWRRETKERKAAEILAVLK-EKRFVLLLDGIQRELDLEEIGVPFPSRDNGCKIVFTTQSLEACDESKWVDAKVEITCLSPEEAWDLFQETVGE 316          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL14_ARATH (Probable disease resistance protein At1g62630 OS=Arabidopsis thaliana GN=At1g62630 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.097e-21
Identity = 61/151 (40.40%), Postives = 90/151 (59.60%), Query Frame = -2
Query:   53 IIGVYGMGGIGKTTLVQEVARQAMADKL-FDTVVFSEVSQTPDIKKIQQEIAEKLGLELHEEVE---SRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAG 493
            I+G+YGMGG+GKTTL+ ++      DK  FD  ++  VSQ  +++KIQ EIA+KLGL  HE  +   S++   L   LKN KK ++ LD++W  ++L  IG+P     +GCKL FT+R L+V      E+   +  L E  A+ LF+   G
Sbjct:  174 IMGMYGMGGVGKTTLLTQLFNMFNKDKCGFDIGIWVVVSQEVNVEKIQDEIAQKLGLGGHEWTQRDISQKGVHLFNFLKN-KKFVLFLDDLWDKVELANIGVPDPRTQKGCKLAFTSRSLNVCTSMGDEEPMEVQCLEENVAFDLFQKKVG 323          
The following BLAST results are available for this feature:
BLAST of CX046578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
DRL27_ARATH7.842e-2831.41Disease resistance protein At4g27190 OS=Arabidopsi... [more]
DRL28_ARATH1.479e-2635.29Probable disease resistance protein At4g27220 OS=A... [more]
DRL16_ARATH1.060e-2432.20Probable disease resistance protein At1g61190 OS=A... [more]
DRL33_ARATH1.384e-2428.37Probable disease resistance protein At5g43740 OS=A... [more]
DRL32_ARATH1.384e-2430.00Probable disease resistance protein At5g43730 OS=A... [more]
DRL18_ARATH3.410e-2331.44Probable disease resistance protein At1g61310 OS=A... [more]
DRL15_ARATH3.410e-2331.82Probable disease resistance protein At1g61180 OS=A... [more]
RPS5_ARATH5.816e-2328.98Disease resistance protein RPS5 OS=Arabidopsis tha... [more]
DRL38_ARATH2.886e-2229.92Probable disease resistance protein At5g47260 OS=A... [more]
DRL14_ARATH1.097e-2140.40Probable disease resistance protein At1g62630 OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_8H07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-8H07-O14-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046578 ID=CX046578; Name=CX046578; organism=Citrus sinensis; type=EST; length=836bp
CCTTGGCTACCCTTGTTGCTATAGGTTTTAACTCACGGTTTTCAACATAA
TCACCAGCCATTATCTTGAACAATCTCCAGGCTTCTTGTTCATTTAAAAT
GCCAATCGAGAAGTTTTTTTCAGATTCTGTCCTTAACAGCACATCAAGAT
CTCTTGTTGTGAATAATAATTTGCATCCTCTGTGCTCAACTCCAAAAGGA
ATTCCAATAGTCCCCAAATCAAGAGGTTTCCAGATGTTATCCAGAATCAC
AAGGATCTTTTTCTCATTTTTCAATCGCTCACATAGCCTACTTGCTCTTC
TAGATTCAACTTCCTCGTGCAACTCCAGGCCCAACTTCTCGGCAATTTCC
TGTTGAATCTTTTTTATGTCTGGAGTTTGCGAAACCTCTGAAAAGACCAC
CGTATCAAAGAGCTTGTCTGCCATAGCTTGCCTGGCGACCTCCTGCACCA
GTGTCGTCTTTCCAATGCCGCCCATGCCGTAGACCCCAATGATGCTGACA
TCAACAACGATCAATGCATTTTGTATGGCTTTCAAAGTAGAAAGTCTTGA
TTCGAAGGCCTCGTAGCCTTTGTGAGACTTGAGCCATATATCCTCCGGAA
CGGTACGGTAGGAAATTCTATCATCAAATCTCCCAGCTTCTTCTCGGAGT
TTAAAAAGGGCCTCCTTCTCTGTTTCTGCTTTCTTTCCATGATGATAGCG
AGCAAACCAATCAGGAAACAGCCCCATGAGACATCGGCCATCATTTGCTT
TCTCTTCGTCTTGAATGAATTTGGCTGCCTGCTCAATGCTCTCGTTCGCA
TTAACCAGCCATTTCTCAACATTCTCTTCAATCTTT
back to top