CX046565

Overview
NameCX046565
Unique NameCX046565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11050 contig Csv1_Contig11050:872..1664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2)

HSP 1 Score: 300.827 bits (769), Expect = 5.589e-81
Identity = 151/173 (87.28%), Postives = 161/173 (93.06%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYANRSA 540
            LGLHDLRSRFGIIPQEPVLFEGTVRSNIDP  QYSDEEIWKSLERCQLKDVVA KP+KLDSLV D+G+NWSVGQRQLLCLGRVMLK SRLLF+DEATASVDSQTDA IQ+IIRE+FA+CTIISIAHRIPTVMD DRV+V+DAG AKEF  P+RLLERPSLF ALVQEYA RSA
Sbjct: 1342 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDVVATKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFASCTIISIAHRIPTVMDGDRVLVIDAGKAKEFDSPARLLERPSLFAALVQEYALRSA 1514          
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 6.179e-80
Identity = 148/173 (85.55%), Postives = 161/173 (93.06%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYANRSA 540
            LGLHDLRSRFGIIPQEPVLFEGTVRSNIDP  +YSDEEIWKSLERCQLKDVVA+KP+KLDSLVAD+G+NWSVGQRQLLCLGRVMLK SR+LF+DEATASVDSQTDA IQ+IIRE+F+ CTIISIAHRIPTVMDCDRV+V+DAG AKE+  P RLLER SLF ALVQEYA RSA
Sbjct: 1365 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEKYSDEEIWKSLERCQLKDVVASKPEKLDSLVADNGENWSVGQRQLLCLGRVMLKRSRILFLDEATASVDSQTDAMIQKIIREDFSDCTIISIAHRIPTVMDCDRVLVIDAGKAKEYDSPVRLLERQSLFAALVQEYALRSA 1537          
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 6.222e-56
Identity = 103/169 (60.95%), Postives = 134/169 (79.29%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSL-VADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEY 525
            +GL DLR +  IIPQEP LF G +R+N+DP+G YSD+EIWK+LE+CQLK  ++  P+KLDS  V+D G+NWSVGQRQL CLGRV+LK +++L +DEATAS+DS TDA IQRIIREEFA CT+I++AHR+PTV+D D V+V+  G   E+ +PS+L+E  S F  LV EY
Sbjct: 1113 IGLKDLRMKLSIIPQEPTLFRGCIRTNLDPLGVYSDDEIWKALEKCQLKTTISNLPNKLDSSEVSDEGENWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRVPTVIDSDMVMVLSFGDLVEYNEPSKLMETDSYFSKLVAEY 1281          
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.459e-54
Identity = 99/173 (57.23%), Postives = 137/173 (79.19%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLER-PSLFGALVQEYANRS 537
            +GLHDLRSR GIIPQ+P LF+GT+R N+DP+ QY+D EIW+++++CQL DV+ AK ++LD+ V ++G+NWSVGQRQL+CLGRV+LK S +L +DEATASVDS TD  IQ+II +EF   T+++IAHRI TV++ D V+V+  G   EF  P++LL+R  S F  L++EY+ RS
Sbjct: 1307 IGLHDLRSRLGIIPQDPALFDGTIRLNLDPLAQYTDHEIWEAIDKCQLGDVIRAKDERLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKEYSLRS 1479          
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.606e-54
Identity = 100/169 (59.17%), Postives = 131/169 (77.51%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLL-ERPSLFGALVQEY 525
            +G+HDLRSRFGIIPQ+P LF GTVR N+DP+ Q+SD EIW+ L +CQLK+VV  K + LDSLV + G NWS+GQRQL CLGR +L+ SR+L +DEATAS+D+ TD  +Q+ IR EFA CT+I++AHRIPTVMDC  V+ +  G   E+ +P +L+ +  SLFG LV+EY
Sbjct: 1211 IGVHDLRSRFGIIPQDPTLFNGTVRFNLDPLCQHSDAEIWEVLGKCQLKEVVQEKENGLDSLVVEDGSNWSMGQRQLFCLGRAVLRRSRVLVLDEATASIDNATDLILQKTIRREFADCTVITVAHRIPTVMDCTMVLSISDGRIVEYDEPMKLMKDENSLFGKLVKEY 1379          
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.297e-53
Identity = 100/173 (57.80%), Postives = 136/173 (78.61%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLER-PSLFGALVQEYANRS 537
            +GLHDLRSR GIIPQ+  LF+GT+R N+DP+ QY+D EIW++L++CQL DV+ AK +KLD+ V ++G+NWSVGQRQL+CLGRV+LK S +L +DEATASVDS TD  IQ+II +EF   T+++IAHRI TV++ D V+V+  G   EF  P++LL+R  S F  L++EY+ RS
Sbjct:  854 IGLHDLRSRLGIIPQDNALFDGTIRLNLDPLAQYTDREIWEALDKCQLGDVIRAKDEKLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKEYSLRS 1026          
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.694e-53
Identity = 104/178 (58.43%), Postives = 139/178 (78.09%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLE-RPSLFGALVQEYANRSAEL*E 552
            +GLHDLRSR GIIPQ+P LFEGT+R+N+DP+ ++SD++IW++L++ QL DVV  K  KLDS V ++GDNWSVGQRQL+ LGR +LK +++L +DEATASVD+ TD  IQ+IIR EF  CT+ +IAHRIPTV+D D V+V+  G   EF  P+RLLE + S+F  LV EY++RS  + E
Sbjct: 1336 IGLHDLRSRLGIIPQDPTLFEGTIRANLDPLEEHSDDKIWEALDKSQLGDVVRGKDLKLDSPVLENGDNWSVGQRQLVSLGRALLKQAKILVLDEATASVDTATDNLIQKIIRTEFEDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPARLLEDKSSMFLKLVTEYSSRSTGIPE 1513          
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB6C_ARATH (ABC transporter C family member 6 OS=Arabidopsis thaliana GN=ABCC6 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.213e-53
Identity = 101/173 (58.38%), Postives = 132/173 (76.30%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLE-RPSLFGALVQEYANRS 537
            +GLHDLRSR  IIPQ+P +FEGT+RSN+DP+ +Y+D++IW++L+ CQL D V  K  KLDS V+++G NWSVGQRQL+CLGRV+LK S+LL +DEATAS+D+ TD  IQ  +R  FA CT+I+IAHRI +V+D D V+++D G  KE   P+RLLE R SLF   V EY   S
Sbjct: 1287 IGLHDLRSRLSIIPQDPTMFEGTIRSNLDPLEEYTDDQIWEALDNCQLGDEVRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKLLVLDEATASIDTATDNLIQETLRHHFADCTVITIAHRISSVIDSDMVLLLDQGLIKEHDSPARLLEDRSSLFSKFVAEYTTSS 1459          
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.439e-53
Identity = 99/173 (57.23%), Postives = 134/173 (77.46%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLE-RPSLFGALVQEYANRS 537
            +GLHDLRSR  IIPQEP +FEGTVRSN+DP+ +Y+D++IW++L++CQL D +  K  KLDS V+++G NWSVGQRQL+CLGRV+LK S++L +DEATASVD+ TD  IQ  +R+ F+ CT+I+IAHRI +V+D D V+++D G  +E   P+RLLE + S F  LV EY   S
Sbjct: 1309 IGLHDLRSRLSIIPQEPTMFEGTVRSNLDPLEEYADDQIWEALDKCQLGDEIRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKVLILDEATASVDTATDTLIQETLRQHFSGCTVITIAHRISSVIDSDMVLLLDQGLIEEHDSPARLLEDKSSSFSKLVAEYTASS 1481          
BLAST of CX046565 vs. ExPASy Swiss-Prot
Match: AB3C_ARATH (ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.439e-53
Identity = 98/174 (56.32%), Postives = 137/174 (78.74%), Query Frame = 1
Query:   22 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLE-RPSLFGALVQEYANRSA 540
            +GLHDLR R  IIPQ+P +FEGT+RSN+DP+ +Y+D++IW++L++CQL D V  K  KLDS V+++GDNWS+GQRQL+CLGRV+LK S++L +DEATASVD+ TD  IQ+ +RE F+ CT+I+IAHRI +V+D D V+++  G  +E+  P RLLE + S F  LV EY +RS+
Sbjct: 1337 IGLHDLRLRLSIIPQDPTMFEGTMRSNLDPLEEYTDDQIWEALDKCQLGDEVRKKEQKLDSSVSENGDNWSMGQRQLVCLGRVLLKRSKILVLDEATASVDTATDNLIQKTLREHFSDCTVITIAHRISSVIDSDMVLLLSNGIIEEYDTPVRLLEDKSSSFSKLVAEYTSRSS 1510          
The following BLAST results are available for this feature:
BLAST of CX046565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 440
Match NameE-valueIdentityDescription
AB4C_ARATH5.589e-8187.28ABC transporter C family member 4 OS=Arabidopsis t... [more]
AB14C_ARATH6.179e-8085.55ABC transporter C family member 14 OS=Arabidopsis ... [more]
AB8C_ARATH6.222e-5660.95ABC transporter C family member 8 OS=Arabidopsis t... [more]
AB9C_ARATH4.459e-5457.23ABC transporter C family member 9 OS=Arabidopsis t... [more]
AB10C_ARATH7.606e-5459.17ABC transporter C family member 10 OS=Arabidopsis ... [more]
AB15C_ARATH1.297e-5357.80Putative ABC transporter C family member 15 OS=Ara... [more]
AB5C_ARATH1.694e-5358.43ABC transporter C family member 5 OS=Arabidopsis t... [more]
AB6C_ARATH2.213e-5358.38ABC transporter C family member 6 OS=Arabidopsis t... [more]
AB7C_ARATH6.439e-5357.23ABC transporter C family member 7 OS=Arabidopsis t... [more]
AB3C_ARATH6.439e-5356.32ABC transporter C family member 3 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_8G12_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-8G12-M24-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046565 ID=CX046565; Name=CX046565; organism=Citrus sinensis; type=EST; length=793bp
CCCCCCCCGACATTTCATTGGTTGGGGCTTCATGACCTAAGGTCTCGCTT
TGGGATCATTCCTCAAGAACCTGTCCTTTTTGAAGGAACTGTGAGAAGCA
ACATTGATCCAATTGGTCAGTATTCAGATGAAGAAATCTGGAAGAGCCTC
GAGCGATGTCAACTTAAAGATGTGGTAGCTGCAAAGCCTGATAAACTCGA
TTCTTTAGTGGCCGATAGTGGTGACAACTGGAGCGTGGGACAAAGGCAGC
TTCTTTGTCTGGGAAGGGTTATGCTAAAGCACAGCCGGCTCTTGTTTATG
GATGAGGCGACGGCTTCTGTTGATTCACAAACTGATGCTGAAATTCAAAG
GATCATTCGAGAGGAGTTTGCTGCCTGTACAATTATCAGCATTGCTCACA
GGATACCCACAGTCATGGATTGTGATAGAGTTATAGTTGTTGATGCAGGA
TGGGCGAAAGAATTTGGCAAGCCATCCAGGTTGCTTGAGAGGCCATCACT
CTTTGGAGCATTGGTGCAGGAGTATGCCAACCGATCGGCAGAACTGTAGG
AACAAATCCTTTGCACTTGATGTTGGTTGAAAAGAGTTTTCTGTGATGGA
ATGCCTATGAGTTTAAGAACCACCTGTGACTGCCATGAAAGAATCACATT
CACTCGCTCAAAAGTTGCAGCAAAGAAACTTCTTCTGAATAATGCCATGG
AAGTTTAAGTAATAACTCTTCGGCATATTTGCAATTTTGATGTCGTAGTC
GACAAATGAAGAATAGAAAATATTGTGATGTTAGGAACTGTCA
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