CX046525

Overview
NameCX046525
Unique NameCX046525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046525 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.134e-12
Identity = 47/170 (27.65%), Postives = 83/170 (48.82%), Query Frame = -3
Query:  271 VKVYAAGLYINQSILSKLNA-WKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGKTFWDALDD---AISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLDPSKMLVSISGDG-LPSGVDATIESENVTFALYDVFFGGAPVSPSLKASVATGLATILK 765
            VK  A G+Y+    +  L+  WKGK A  + E    F  I   P EK  ++ ++  + G+ + + + +   AI  +  I T  +  A+  F  +F+ +    G  I  T      +++ IS DG +P   +A IE++ ++ ++ +   G   VSP  + SVAT L+ +LK
Sbjct:   45 VKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELLK 214          
BLAST of CX046525 vs. ExPASy Swiss-Prot
Match: CF1B2_SOYBN (Chalcone--flavonone isomerase 1B-2 OS=Glycine max GN=CHI1B2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = -3
Query:  292 VKVYAAGLYINQSILSKLNA-WKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGKTFWDALDD---AISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLDPSKMLVSISGD-GLPSGVDATIESENVTFALYDVFFGGAPVSPSLKASVAT 765
            VK    G+Y+    +S L A WKGK AA + +    +  I + P EK ++   +R +DG+ +   + +   A    +   +  +E A+  FR+ F+ +N   G+ +F        + +S S D  +P    A I+++ ++ A+ +   G  PVSP+LK S+AT
Sbjct:   47 VKFTGIGVYLEDKAVSSLGAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMESVGTYSEAEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLAT 209          
BLAST of CX046525 vs. ExPASy Swiss-Prot
Match: CF1B1_SOYBN (Chalcone--flavonone isomerase 1B-1 OS=Glycine max GN=CHI1B1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = -3
Query:  292 VKVYAAGLYINQSILSKLNA-WKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGKTFWDALDD---AISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLDPSKMLVSISGD-GLPSGVDATIESENVTFALYDVFFGGAPVSPSLKASVAT 765
            VK    G+Y+    +S L A WKGK AA + +    +  I + P EK ++   +R +DG+ +   + +   A    +   +  +E A+  FR+ F+ +N   G+ +F        + +S S D  +P    A I+++ ++ A+ +   G  PVSP+LK S+AT
Sbjct:   47 VKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLAT 209          
BLAST of CX046525 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 46/170 (27.06%), Postives = 80/170 (47.06%), Query Frame = -3
Query:  271 VKVYAAGLYINQSILSKLNA-WKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGKTFWDALDD---AISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLDPSKMLVSISGDG-LPSGVDATIESENVTFALYDVFFGGAPVSPSLKASVATGLATILK 765
            VK  A G+Y+    +  L   WKGK A  + E    F  I   P EK  ++ ++  + G+ + + + +   AI  +  I T  +  A+  F  +F+ +    G  I  T      + +  S DG +P   +A IE++ ++ ++ +   G   VSP  + SVAT L+ +LK
Sbjct:   45 VKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELLK 214          
The following BLAST results are available for this feature:
BLAST of CX046525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CFI2_FRAAN8.134e-1227.65Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CF1B2_SOYBN1.388e-1128.22Chalcone--flavonone isomerase 1B-2 OS=Glycine max ... [more]
CF1B1_SOYBN4.037e-1128.22Chalcone--flavonone isomerase 1B-1 OS=Glycine max ... [more]
CFI1_FRAAN8.994e-1127.06Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_8F02_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-8F02-K4-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046525 ID=CX046525; Name=CX046525; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTTTTGATGAACAAAATTACCAGCAAAAATGCTTATTC
AAATGATGAGATTTTGCATCCATGAGCATGACGCATGTGCAGAAAGACTC
TTACTGCTATACATGTTAATTGTGATGGATAACATCAAGCTCAATTTACA
AGGCATTATCCAGACCAGGTTTAAAGCAAAAAACTATACAAAAATACATA
AGTTATAGAGACATGATCAAGAACAACAAGGGAATAAAGAGATAACAAAA
AGTTTAAAATATTAACTTCACTTGAGAATTGTAGCTAGTCCAGTGGCAAC
TGAGGCTTTCAAAGAAGGGGAAACTGGAGCTCCTCCAAAAAATACATCAT
AAAGAGCAAAAGTGACATTTTCTGACTCAATTGTAGCATCCACCCCGGAT
GGCAACCCATCTCCTGAAATGCTAACCAGCATCTTCGAAGGATCCAGCCA
AGTTAAGAATATGAAAGTTCCTTTCATAAGATTTCGCCCTTGGAAGATGC
TTCGGAATGTGGACAGGGCCGATTCATCAACAGGTGTTGGTATCCTGATT
CTTGGGGAGATCGCATCATCCAAAGCATCCCAGAAAGTTTTTCCATCAAC
ATCTCTGACCAGAACAATCTTTAATGATTTCTCCGAAGGAGCCTGATAGA
TTGTGTCAAACAAAGATGAATCCTCTTGAATGTTAGCTGCCCCTTTTCCT
TTCCATGCATTCAGTTTACTTAAGATGGATTGGTTAATATATAGTCCAGC
AGCATAGACCTTAACGCCAATGATAGCAAAAACTTTCTCCCTATATCCTG
TTCCAAGCAAAGACAATGGACTCGAGTAACCTGGCAAATTCAAAGACTTC
TGAAATT
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