CX046384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046384 vs. ExPASy Swiss-Prot
Match: GAT25_ARATH (GATA transcription factor 25 OS=Arabidopsis thaliana GN=TIFY2A PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.387e-54 Identity = 101/140 (72.14%), Postives = 115/140 (82.14%), Query Frame = -2 Query: 425 KRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAISSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKAAPQAGQTSSLNKNEENGTLKAEQVIRAVGN 844 KRK RNF+KKIRYTVRKEVALRMQRNKGQFTSAKSNN+++ASA SSWGSNQ+WA + + +Q+Q+I CRHCGI EKSTPMMRRGP GPRTLCNACGLMWANKG RDLSKA+PQ Q LNKNE+ Q++ V N Sbjct: 157 KRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNEDANLETDHQIMITVAN 296
BLAST of CX046384 vs. ExPASy Swiss-Prot
Match: GAT27_ARATH (GATA transcription factor 27 OS=Arabidopsis thaliana GN=TIFY2B PE=2 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 1.339e-51 Identity = 100/145 (68.97%), Postives = 117/145 (80.69%), Query Frame = -2 Query: 413 KRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAISSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKA-APQAGQTSSLNKNEENGTLKAEQVIRAVGNINGS 844 KRK RNF+K IRYTVRKEVALRMQR KGQFTSAKS+N+DS S S WGSNQSWA + +Q +++CRHCG SEKSTPMMRRGP+GPRTLCNACGLMWANKGTLRDLSK PQ Q SLNKNE+ L+A+Q++ G+I+ + Sbjct: 153 KRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKVPPPQTPQHLSLNKNED-ANLEADQMMEVTGDISNT 296
BLAST of CX046384 vs. ExPASy Swiss-Prot
Match: GAT26_ARATH (GATA transcription factor 26 OS=Arabidopsis thaliana GN=TIFY1 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31 Identity = 77/142 (54.23%), Postives = 93/142 (65.49%), Query Frame = -2 Query: 419 KRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAISSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKAAPQAGQTSSLNKNEENGTLKAEQVIRAVGNIN 844 KR R FEKK+RY VR+EVALRM RNKGQFTS+K + A +S G++Q A D + +I C HCGIS K TPMMRRGP GPRTLCNACGL WAN+GTLRDLSK + +L K ++ G+ V A N+N Sbjct: 156 KRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTD----GAYNS-GTDQDSAQD---DAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKKTEE--NQLALMKPDDGGS-----VADAANNLN 282 The following BLAST results are available for this feature:
BLAST of CX046384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046384 ID=CX046384; Name=CX046384; organism=Citrus sinensis; type=EST; length=845bpback to top |