CX046356

Overview
NameCX046356
Unique NameCX046356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 4.809e-110
Identity = 196/249 (78.71%), Postives = 217/249 (87.15%), Query Frame = -3
Query:  115 QQPKKTAGAIVWIMAAAFGIGLFVLVAGTRCFRANYSR----GFSNDREIGPWKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKEN--IRRRR-GVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAP 840
            ++PKKTAGAIVWI+AAA G+G FVLVA TRCF+ +Y      G  N  +IGPWKLTAFQRLNFTADDV+ECLS +D ILGMGSTGTVYKAEMP GEIIAVKKLWGK+KEN  IRRR+ GVLAEVDVLGNVRHRNIVRLLGCC+NR+CTMLLYEYMPNG+LDDLLH  +K     A+W   Y+IA+GVAQGICYLHHDCDPVIVHRDLKPSNILLD + EARVADFGVAKLIQ+DESMSV+AGSYGYIAP
Sbjct:  647 ERPKKTAGAIVWILAAAIGVGFFVLVAATRCFQKSYGNRVDGGGRNGGDIGPWKLTAFQRLNFTADDVVECLSKTDNILGMGSTGTVYKAEMPNGEIIAVKKLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDESMSVVAGSYGYIAP 895          
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 3.168e-53
Identity = 105/197 (53.30%), Postives = 141/197 (71.57%), Query Frame = -3
Query:  115 WKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI---QSDESMSVIAGSYGYIAP 696
            WKLTAFQ+L+F ++DVLECL   + I+G G  G VY+  MP    +A+K+L G+     R   G  AE+  LG +RHR+IVRLLG  +N++  +LLYEYMPNG+L +LLH  +KG +L   W TR+++A+  A+G+CYLHHDC P+I+HRD+K +NILLD + EA VADFG+AK +    + E MS IAGSYGYIAP
Sbjct:  673 WKLTAFQKLDFKSEDVLECLK-EENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTG--RSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHG-SKGGHL--QWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAP 863          
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53
Identity = 118/250 (47.20%), Postives = 157/250 (62.80%), Query Frame = -3
Query:  115 VWIMAAAFGIGLFVLVAGTRCFRANYSRGFSNDR--EIGPWKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLW-GKHKEN------IRRRRGVL-----AEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI----QSDESMSVIAGSYGYIAP 810
            VW++ + F +   VL+AG   F   Y R F   R  E   W L +F +L F+  ++LE L   D ++G G++G VYK  +  GE +AVK+LW G  KE          + GV      AEV+ LG +RH+NIV+L  CCS R+C +L+YEYMPNG+L DLLH+   G   +  W TR+KI L  A+G+ YLHHD  P IVHRD+K +NIL+DG+  ARVADFGVAK +    ++ +SMSVIAGS GYIAP
Sbjct:  618 VWLLRSIFVLAAMVLLAGVAWFYFKY-RTFKKARAMERSKWTLMSFHKLGFSEHEILESLD-EDNVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGG---MLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAP 862          
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 1.204e-52
Identity = 105/203 (51.72%), Postives = 138/203 (67.98%), Query Frame = -3
Query:  115 PWKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVL----AEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD----ESMSVIAGSYGYIAP 699
            PW    FQ+L  T ++++  L+  + ++G G +G VYKAE+P G+I+AVKKLW K K+N       +    AE+ +LGN+RHRNIV+LLG CSN+   +LLY Y PNGNL  LL       N   DW TRYKIA+G AQG+ YLHHDC P I+HRD+K +NILLD + EA +ADFG+AKL+ +      +MS +AGSYGYIAP
Sbjct:  752 PWTFIPFQKLGITVNNIVTSLT-DENVIGKGCSGIVYKAEIPNGDIVAVKKLW-KTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLLQG-----NRNLDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAP 947          
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.204e-52
Identity = 107/233 (45.92%), Postives = 148/233 (63.52%), Query Frame = -3
Query:  115 LFVLVAGTRCFRANYSRGFSNDREIGP---WKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLW-----GKHKENIRR-RRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDE---SMSVIAGSYGYIAP 777
            + +++      RA  +     D E+G    W+ T FQ+LNF+ D ++ CL +   ++G G +G VY+A++  GE+IAVKKLW     G H E  +  R    AEV  LG +RH+NIVR LGCC NR   +L+Y+YMPNG+L  LLH + +G +L  DW  RY+I LG AQG+ YLHHDC P IVHRD+K +NIL+  + E  +ADFG+AKL+   +     + +AGSYGYIAP
Sbjct:  737 VLMILGAVAVIRARRNIDNERDSELGETYKWQFTPFQKLNFSVDQIIRCL-VEPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHER-RGSSL--DWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAP 965          
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.502e-52
Identity = 111/249 (44.58%), Postives = 151/249 (60.64%), Query Frame = -3
Query:  115 GAIVWIMAAAFGIGLFVLVAGTRCFRANYSRGFSNDREIGP----WKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRR-------RRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDE---SMSVIAGSYGYIAP 819
            G ++ + A    +G+  ++   +  R +      ND E G     W+ T FQ+LNFT + VL+CL +   ++G G +G VYKAEMP  E+IAVKKLW     N+         R    AEV  LG++RH+NIVR LGCC N+   +L+Y+YM NG+L  LLH ++   +L   W  RYKI LG AQG+ YLHHDC P IVHRD+K +NIL+  + E  + DFG+AKL+   +   S + IAGSYGYIAP
Sbjct:  727 GLLISVTAVLAVLGVLAVIRAKQMIRDD------NDSETGENLWTWQFTPFQKLNFTVEHVLKCL-VEGNVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSL--GWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAP 966          
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.125e-49
Identity = 100/201 (49.75%), Postives = 136/201 (67.66%), Query Frame = -3
Query:  115 KLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENL-VADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ-------SDESMSVIAGSYGYIAP 693
            K+T FQR+ FT +D+   L+  D I+G G +G VY+ ++  G+ +AVKKLWG+  +         +EV+ LG VRH NIV+LL CC+  E   L+YE+M NG+L D+LH++ +   +   DW TR+ IA+G AQG+ YLHHD  P IVHRD+K +NILLD EM+ RVADFG+AK ++       SD SMS +AGSYGYIAP
Sbjct:  668 KITIFQRVGFTEEDIYPQLT-EDNIIGSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAP 867          
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49
Identity = 109/245 (44.49%), Postives = 152/245 (62.04%), Query Frame = -3
Query:  115 VWIMAAAFGIGLFVLVAGTRCFRANYSRGFS-NDREIGPWKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLW-------GKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ-----SDESMSVIAGSYGYIAP 810
            VWI+   F +   V V G   F A   +  +     +   K  +F +L+F+  ++ +CL   + ++G GS+G VYK E+ GGE++AVKKL         ++  +   R    AEV+ LG +RH++IVRL  CCS+ +C +L+YEYMPNG+L D+LH   KG  +V  W  R +IAL  A+G+ YLHHDC P IVHRD+K SNILLD +  A+VADFG+AK+ Q     + E+MS IAGS GYIAP
Sbjct:  625 VWILLTIFLLAGLVFVVGIVMFIAKCRKLRALKSSTLAASKWRSFHKLHFSEHEIADCLDEKN-VIGFGSSGKVYKVELRGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKG-GVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAP 867          
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.091e-45
Identity = 96/231 (41.56%), Postives = 137/231 (59.31%), Query Frame = -3
Query:  115 LFVLVAGTRCFRANYSRGFSNDREIGPWKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDESMSV----------IAGSYGYIAP 777
            + VL+A     RA  +       EI  W++T +Q+L+F+ DD+++ L+ S  ++G GS+G VY+  +P GE +AVKK+W K +          +E+  LG++RHRNIVRLLG CSNR   +L Y+Y+PNG+L   LH   KG     DW  RY + LGVA  + YLHHDC P I+H D+K  N+LL    E  +ADFG+A+ I    +  +          +AGSYGY+AP
Sbjct:  714 VLVLMAVYTLVRARAAGKQLLGEEIDSWEVTLYQKLDFSIDDIVKNLT-SANVIGTGSSGVVYRITIPSGESLAVKKMWSKEESGAFN-----SEIKTLGSIRHRNIVRLLGWCSNRNLKLLFYDYLPNGSLSSRLHGAGKGG--CVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAP 936          
BLAST of CX046356 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.291e-42
Identity = 95/194 (48.97%), Postives = 121/194 (62.37%), Query Frame = -3
Query:  115 FTADDVLECLS--MSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGV----LAEVDVLGNVRHRNIVRLLGCCSNR--ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS--DESMSVIAGSYGYIAP 666
            FT  D+LE         I+G G+ GTVYKA MP G+ IAVKKL    + N            AE+  LG +RHRNIVRL   C ++     +LLYEYM  G+L +LLH    G++   DW TR+ IALG A+G+ YLHHDC P I+HRD+K +NIL+D   EA V DFG+AK+I     +S+S +AGSYGYIAP
Sbjct:  807 FTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHG---GKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAP 997          
The following BLAST results are available for this feature:
BLAST of CX046356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5148_ARATH4.809e-11078.71Probable leucine-rich repeat receptor-like protein... [more]
CLV1_ARATH3.168e-5353.30Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
HSL1_ARATH7.057e-5347.20Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
Y1341_ARATH1.204e-5251.72Probable LRR receptor-like serine/threonine-protei... [more]
RCH2_ARATH1.204e-5245.92Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
RCH1_ARATH3.502e-5244.58LRR receptor-like serine/threonine-protein kinase ... [more]
HSL2_ARATH2.125e-4949.75LRR receptor-like serine/threonine-protein kinase ... [more]
RLK5_ARATH4.734e-4944.49Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
Y4265_ARATH1.091e-4541.56Probable LRR receptor-like serine/threonine-protei... [more]
Y2317_ARATH4.291e-4248.97Probable leucine-rich repeat receptor-like protein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_7E03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7E03-I5-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046356 ID=CX046356; Name=CX046356; organism=Citrus sinensis; type=EST; length=842bp
TTTTTTTTTTTTTTTTTAATTTAATTTTGTACGATTGCTAACGTGCGCAT
ATGCAGTGTCAAACATTTGGTCAACCCAACAAAAAGGAACTCAAAAACAA
AAACAAAACGTACCTGGCGCAATGTAGCCGTAGGACCCGGCGATGACGGA
CATGGACTCGTCACTCTGGATCAGCTTAGCCACGCCGAAATCGGCCACCC
TGGCCTCCATCTCACCGTCCAATAGAATATTGCTCGGCTTGAGATCACGG
TGGACGATCACCGGATCACAGTCGTGGTGGAGATAGCAAATCCCCTGCGC
CACACCGAGCGCAATCTTGTACCTCGTCACCCAATCGGCCACCAAATTTT
CTCCTTTATTTTTGGCGTGCAATAAATCGTCTAAATTCCCATTCGGCATG
TACTCGTAGAGCAGCATCGTGCACTCCCTGTTGCTGCAGCACCCTAACAA
CCTCACTATGTTTCTATGCCTCACGTTTCCCAACACATCCACCTCAGCGA
GCACCCCTCGTCTCCGTCGGATATTCTCCTTATGCTTACCCCACAACTTC
TTCACCGCTATGATCTCGCCACCTGGCATCTCCGCTTTGTAGACAGTCCC
TGTGGACCCCATCCCCAGAATCTTATCGCTCATAGACAAACACTCCAATA
CATCATCCGCCGTGAAATTCAACCGCTGAAACGCCGTCAATTTCCACGGC
CCGATTTCTCGGTCGTTACTGAATCCACGGCTGTAGTTCGCGCGGAAGCA
CCGAGTCCCGGCGACGAGAACAAACAATCCTATACCGAACGCGGCTGCCA
TGATCCACACTATAGCTCCAGCGGTTTTCTTCGGCTGCTGCT
back to top