CX046314

Overview
NameCX046314
Unique NameCX046314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5652 contig Csv1_Contig5652:862..1748. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046314 vs. ExPASy Swiss-Prot
Match: YDJ7_SCHPO (Uncharacterized protein C57A10.07 OS=Schizosaccharomyces pombe GN=SPAC57A10.07 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.673e-50
Identity = 107/248 (43.15%), Postives = 153/248 (61.69%), Query Frame = -3
Query:  124 PFVKLKNLVMVAGHSIYTSSSCGKVDKEDSWFLEPYQQHPGQAASFVAHIQEGVEIVAKDDKALLLFSGGETRKDAGPRSEAQSYWTVAESKGWFGNEESVRWRAMTEEHARDSFENLLFSVCRFRELTGTYPHNITVVSYDFKEERFTQLHRSAIGFPESRFFYSGTP---GSTTSKEAAMRGEALVRSQFQEDPYGCLGSLW-RKKLGRDPFHRTIPYPNGCPEIEGLFRYCGTAP---YSGSLPW 846
            P   L +L++VAGH+++   S    D +  W LEPYQ+  G+   F  H++ G++++++DD +LL+FSGG+TR  AGP SEAQSY++++       ++E +  R  TEE ARDS EN+LFSV RF E+T  YP  ITVVS+DFK +RF  LHR AI FPE +F + G     G + +   A R  A++   F EDPY C   L  +K++ R+PF R   Y   CPE+  L +YC + P   ++G LPW
Sbjct:   72 PLKNLTHLIIVAGHAVWLGGSTNGED-DSEWILEPYQK--GEGKVFAQHVRSGLDLLSQDDSSLLVFSGGQTRNGAGPSSEAQSYYSLSMQ---INSDEGLAARRTTEEFARDSLENVLFSVARFYEVTSRYPQKITVVSFDFKRDRFLNLHRKAIKFPEHKFHFVGIDPEGGVSDATREAERKNAII--PFTEDPYACSNPLLVKKRMERNPFRRQHSYLITCPELIPLLQYCPSDPSKFFNGKLPW 311          
BLAST of CX046314 vs. ExPASy Swiss-Prot
Match: YO238_YEAST (Uncharacterized protein YOR238W OS=Saccharomyces cerevisiae GN=YOR238W PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 81/275 (29.45%), Postives = 124/275 (45.09%), Query Frame = -3
Query:  169 LVMVAGHSIYTSSSCGKVDK------EDSWFLEPYQQHPGQAASFVAHIQEGVEIVAKD-DKALLLFSGGETRKDAGPRSEAQSYWTVAESK------------GWFGNEESVRWRAM---------------------TEEHARDSFENLLFSVCRFRELTGTYPHNITVVSYDFKEERFTQLHRSAIGFPESRFFYSG---TPGSTTSKEAAMRGEALVR-------SQFQEDPYGCLGSLWRKKLGRDPFHRTIPYPNG--CPE----IEGL 825
            L++V  HSI+ SSS    +        + W L P+Q       +F+ H    ++++ +  D A ++FSG +T+K+AG  SEAQSY+ + E                F NE  +  + +                     TEE + DSF+NL++S+ RF E+   +P  IT++ + FK  RF   H  AI +P+S   Y G    P +    + +   + LV+       S F  D Y     L  KK  R+PF+RT PY     C E    IEG+
Sbjct:    7 LILVPCHSIWKSSSHPSDNSVNLGQLPEYWHLAPFQYEGNDHLAFIKHGLTAIKLLLQRFDTATVIFSGSQTKKEAGAISEAQSYYFLFEKLIRYVMSNDNIDVPNFDNELRLLLKEVKNLLSSQNVNVDELFYGGSITTEEFSLDSFDNLIYSIYRFEEVNKKFPQKITIIGFAFKMPRFISCHAKAIDYPQSNITYIGIDPKPANYNQTQLSKYYDDLVQMEDKNALSLFSSDWYATKDRLLTKKRSRNPFNRTAPYAQNIFCKENGKRIEGI 281          
The following BLAST results are available for this feature:
BLAST of CX046314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
YDJ7_SCHPO4.673e-5043.15Uncharacterized protein C57A10.07 OS=Schizosacchar... [more]
YO238_YEAST1.567e-2129.45Uncharacterized protein YOR238W OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_7B12_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7B12-C23-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046314 ID=CX046314; Name=CX046314; organism=Citrus sinensis; type=EST; length=887bp
TTTTTTTGAACAAAAGAAAAATATATTCAAGAAAAATTATACTAATAGGT
CAAGCATCTGTTTTGTGGTGCAGGTTATCTTGTATATTGAGAGGTAACAT
ACGGCAGTTTATGTTCATTGGGCCCAAGGAAGAGACCCTGAATATGGAGC
TGTCCCACAGTACCTGAACAAACCTTCAATTTCTGGACATCCATTAGGAT
ATGGTATTGTACGATGAAATGGATCACGCCCTAGTTTTTTACGCCAAAGG
GAACCCAAACACCCATATGGATCTTCTTGAAATTGAGAACGAACCAATGC
CTCACCTCTCATAGCTGCTTCTTTCGAAGTTGTTGAACCTGGGGTGCCAG
AATAAAAGAATCTCGACTCTGGAAATCCAATTGCTGAGCGATGCAACTGT
GTAAATCTCTCCTCCTTAAAATCATAACTTACAACAGTTATATTATGAGG
ATATGTGCCAGTAAGCTCACGGAATCGGCAAACACTAAATAGGAGATTTT
CAAAGCTATCTCTTGCATGCTCTTCTGTCATTGCCCTCCATCTCACGCTT
TCCTCATTGCCAAACCATCCTTTTGATTCAGCAACAGTCCAATAACTCTG
TGCCTCGCTACGAGGACCGGCATCTTTCCTAGTCTCACCCCCACTAAACA
AAAGCAAAGCCTTGTCATCTTTGGCAACAATTTCAACTCCCTCCTGAATA
TGAGCCACAAAACTAGCAGCCTGACCAGGATGCTGCTGATAAGGCTCTAA
AAACCAAGAATCCTCCTTATCAACCTTCCCACAACTACTACTCGTATAAA
TTGAATGTCCAGCAACCATCACAAGATTCTTCAGCTTCACAAATGGGTAA
TTATCACTTCCCACATTAAATTTTCGATAACCAATCG
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