CX046305

Overview
NameCX046305
Unique NameCX046305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX046305_ssr25 microsatellite CX046305_ssr25:25..36. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.741e-29
Identity = 77/155 (49.68%), Postives = 99/155 (63.87%), Query Frame = 3
Query:  348 YFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF---KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            Y  L TG K+P IGLGTW++      +AVK AL VGYR+IDCA +YGNE EVGEA+ E+    KG LKRE+VF+TS L+ + +  + +E  +R +L+ L + YLDLYLMHWP   A   GD   P +  GS +   L   K  WKAME LV+ GL
Sbjct:    7 YETLYTGQKMPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKG-LKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMHWP--YAFKRGDQVFPQNPDGSVQYD-LTDYKDTWKAMEKLVEKGL 157          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.273e-29
Identity = 70/160 (43.75%), Postives = 100/160 (62.50%), Query Frame = 3
Query:  342 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGS-----ERRQFLNRLKKAWKAMEGLVDSGL 803
            +S+ VL TGAK+P +GLGTW++      EAVK A+ +GYR+IDCAH+Y NE EVG  L E  +G  +KRED+F+ S L+C+ +  N ++   + +L++L + YLDLYL+HWP    +GF    DP    G      +   F+    + W+AME LVD GL
Sbjct:    2 ASHLVLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKLQGQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRDLKLDYLDLYLIHWP----TGFKPGKDPFPLDGDGNVVPDESDFV----ETWEAMEELVDEGL 153          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.614e-29
Identity = 75/154 (48.70%), Postives = 96/154 (62.34%), Query Frame = 3
Query:  348 YFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKG--SLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            Y  L TG KIP IGLGTW++      +AVK AL VGYR+IDCA +YGNE EVGEA+ E+      L RE+VF+TS L+ + +  + +E  +R +L++L + YLDLYLMHWP   A   GD   P +  GS +   L   K  WKAME LV  GL
Sbjct:    7 YETLYTGQKIPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQDLQLDYLDLYLMHWP--YAFKRGDQIFPQNPDGSVQYD-LTDYKDTWKAMEKLVKQGL 157          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.474e-28
Identity = 72/159 (45.28%), Postives = 96/159 (60.38%), Query Frame = 3
Query:  333 SPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS--LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            S G  +  L  G KIP IGLGTW++      EAVK ALSVGYR++DCA  Y NE E+G+A  E    +  +KRED+F+TS L+ + +    +E  +R +L +L + YLDLYLMHWP   A   GD   P +  G+ R  + +  K  WKAME LV+ GL
Sbjct:    2 SAGCDFVALYNGQKIPLIGLGTWKSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMHWPH--AFERGDNLFPKNPDGTMRYDYTD-YKDTWKAMEKLVEKGL 157          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 9.551e-28
Identity = 70/160 (43.75%), Postives = 101/160 (63.12%), Query Frame = 3
Query:  342 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGF--GDATDPPSKSGS---ERRQFLNRLKKAWKAMEGLVDSGL 803
            +++ VL  GAK+P +GLGTW++      EAVKTA+ +GYR+IDCAH+Y NE EVG AL E  K   +KRE++F+ S L+C+ +  + ++   + +L +L + YLDLYL+HWP    +GF  G    P   +G+       FL+     W+AMEGLVD GL
Sbjct:    2 ATHLVLYNGAKMPILGLGTWKSPPGQVTEAVKTAIDLGYRHIDCAHVYQNENEVGVALQEKLKEQVVKREELFIVSKLWCTSHDKSLVKGACQKTLNDLKLDYLDLYLIHWP----TGFKHGSEYFPLDAAGNVIPSDTDFLD----TWEAMEGLVDEGL 153          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.779e-27
Identity = 70/156 (44.87%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  342 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKG--SLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            +S  +L+TG K+P IGLGTW++       A+K ALSVGYR+IDCA +YGNE E+GEAL E+     ++ RE++F+TS L+ + +    +E  VR +L +L + YLDLYLMHWP   A   GD   P +  G+ +       K+ WKA+E LV  GL
Sbjct:    3 ASSVLLHTGQKMPLIGLGTWKSEPGQVKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMHWP--YAFERGDNPFPKNADGTVKYD-STHYKETWKALEALVAKGL 155          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 4.740e-27
Identity = 69/157 (43.95%), Postives = 97/157 (61.78%), Query Frame = 3
Query:  342 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGF--GDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            +S  +LN GAK+P +GLGTW++      EAVK A+ VGYR+IDCAH+Y NE EVG A+ E  +   +KRE++F+ S L+C+ +    ++   + +L +L + YLDLYL+HWP    +GF  G    P  +SG+      N L   W AME LVD GL
Sbjct:    2 ASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWP----TGFKPGKEFFPLDESGNVVPSDTNIL-DTWAAMEELVDEGL 153          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.086e-27
Identity = 71/156 (45.51%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  342 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDE-AFKGSL-KREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            +S  +L+TG K+P IGLGTW++       A+K ALSVGYR+IDCA +YGNE E+GEAL E    G L  RE++F+TS L+ + +    +E  +R +L +L + YLDLYLMHWP   A   GD+  P +  G+ R       K+ W+A+E LV  GL
Sbjct:    3 ASCILLHTGQKMPLIGLGTWKSDPGQVKAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP--YAFERGDSPFPKNADGTIRYD-STHYKETWRALEALVAKGL 155          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.056e-26
Identity = 69/156 (44.23%), Postives = 97/156 (62.18%), Query Frame = 3
Query:  342 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF--KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            +S  +L+TG K+P IGLGTW++       A+K AL+VGYR+IDCA +YGNE+E+GEAL E      ++ RE++F+TS L+ + +    +E  +R +L +L + YLDLYLMHWP   A   GD   P +  G+ R       K  WKA+E LV  GL
Sbjct:    3 ASCVLLHTGQKMPLIGLGTWKSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP--YAFERGDNPFPKNADGTIRYD-ATHYKDTWKALEALVAKGL 155          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: ALD1_MOUSE (Aldose reductase-related protein 1 OS=Mus musculus GN=Akr1b7 PE=2 SV=4)

HSP 1 Score: 119.783 bits (299), Expect = 1.801e-26
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 3
Query:  342 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGF--GDATDPPSKSGS---ERRQFLNRLKKAWKAMEGLVDSGL 803
            +++  L+T AK+P +GLGTW++      EAVK A+  GYR+IDCA++Y NE EVGEA+ E  K  ++KRED+F+ S L+ +    + ++   + +L +L + YLDLYL+HWP+    GF  G+A  P    G     +  FL+    AW+AME LVD GL
Sbjct:    2 ATFVELSTKAKMPLVGLGTWKSSPGQVKEAVKAAIDAGYRHIDCAYVYHNENEVGEAIQEKIKENAVKREDLFIVSKLWATFFEKSLVKKAFQNTLSDLKLDYLDLYLVHWPQ----GFQAGNALLPKDNKGKVLLSKSTFLD----AWEAMEELVDQGL 153          
The following BLAST results are available for this feature:
BLAST of CX046305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
AK1A1_XENLA1.741e-2949.68Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
ALDR_PIG2.273e-2943.75Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
AK1A1_XENTR6.614e-2948.70Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
AK1A1_CHICK1.474e-2845.28Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
ALDR_RABIT9.551e-2843.75Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
AK1A1_RAT2.779e-2744.87Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
ALDR_HUMAN4.740e-2743.95Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
AK1A1_BOVIN8.086e-2745.51Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
AK1A1_PIG1.056e-2644.23Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
ALD1_MOUSE1.801e-2642.50Aldose reductase-related protein 1 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7B07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7B07-C13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046305 ID=CX046305; Name=CX046305; organism=Citrus sinensis; type=EST; length=805bp
AAAACGTGAAAAGTAATTCTTTGATTGGTTGGTTGGGTTTGGTCAAAAAA
ATATTTTTTTAATTCTATTTTTGTTGTTTTTCAGTTTCGTGTGGGACTAA
TGCGTCTGTGGGTTTTAAGTCGGGAAGATGATTGAATCTTCATTTGTCTG
CTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTTTAAT
TCTGTCAAAGCTTTGAAGTGAAAAAAAATGCAAACTCTCGTCTGGGTTTT
GTGATTTTTGGTTTGATTTGGTATCTGGGTTTTTGATCTTTTTTTCTTTT
TGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGAGTAGTTAC
TTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTGGGAACATG
GCAAACTGGGGGAGAGCTTTGTGTTGAAGCTGTGAAAACAGCATTGTCAG
TGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATGAGATTGAA
GTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAGAGAGAGGA
TGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAATCAATAAGA
TTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTTCATATTTG
GATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGTTTTGGGGA
TGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCAGTTTTTAA
ATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTAGACTCGGGA
TTGGT
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