CX046294

Overview
NameCX046294
Unique NameCX046294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10670 contig Csv1_Contig10670:262..1118. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCNL4_MOUSE (DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.789e-34
Identity = 80/186 (43.01%), Postives = 111/186 (59.68%), Query Frame = -3
Query:  208 FYSYANKSSGMIDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQ 765
            FY YA      + PEG+E  C DI V   +V +L+LAWK+ A+  GYFTL+EW +G+ +L+ DT  KL+  L  L   +   TNF+  Y +AF +   E+ Q+S+DI +   +LGL+LG  +        ++L+ QS YKVIN DQW     F   IS  D +NYD + AWP++LD FVEW K KQ
Sbjct:  110 FYEYAGTEDA-VGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFA-REKDQRSLDINTAKCMLGLLLGKIW-PLFPVFHQFLE-QSKYKVINKDQWCNVLEFSRTISL-DLSNYDEDGAWPVLLDEFVEWYKDKQ 290          
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCNL4_HUMAN (DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 5.789e-34
Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = -3
Query:  208 FYSYANKSSGMIDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQ 765
            FY YA  +  ++ PEG+E  C DI V   +V +L+LAWK+ A+  GYFTL+EW +G+ +L+ DT  KL+  L  L   +   TNF+  Y +AF +   E+ Q+S+DI +   +LGL+LG  +        ++L+ QS YKVIN DQW     F   I+  D +NYD + AWP++LD FVEW K KQ
Sbjct:  110 FYEYAG-TDDVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFA-REKDQRSLDINTAKCMLGLLLGKIW-PLFPVFHQFLE-QSKYKVINKDQWCNVLEFSRTINL-DLSNYDEDGAWPVLLDEFVEWYKDKQ 290          
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCNL4_DANRE (DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=4 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 4.149e-32
Identity = 74/186 (39.78%), Postives = 113/186 (60.75%), Query Frame = -3
Query:  208 FYSYANKSSGMIDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQ 765
            FY YA     ++ PEG+E  C DI V   +V +L+LAWK+ A+  GYFTL+EW +G+ +L+ D+  KL+ +L  L   +   T+F+  Y +AF +   E+ Q+S+D+ +   +LGL+LG  +        ++L+ QS YKVIN DQW     F   I+  D +NYD + AWP++LD FVEW K ++
Sbjct:   98 FYEYAG-CDDVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQSMGYFTLQEWLKGMGSLQCDSTEKLRNSLDYLRSVLNDATSFKLIYRYAFDFA-REKDQRSLDLNTAKCMLGLLLGKTW-PLFPVFNQFLE-QSKYKVINKDQWCNVLEFSRTINL-DLSNYDEDGAWPVLLDEFVEWYKDRE 278          
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCNL5_HUMAN (DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.418e-32
Identity = 70/187 (37.43%), Postives = 112/187 (59.89%), Query Frame = -3
Query:  205 FYSYANKSSGMIDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQT 765
            FY YA     ++ PEG+E  C DI V   ++ +L+LAWK++AE  G+FT EEW +G+ +L+ D   KL+     L  ++   ++F++ Y +AF +   ++ Q+S+DI++   +L L+LG  +        +YL+ QS Y+V+N DQW     F   +   D +NYD + AWP++LD FVEW K +QT
Sbjct:   55 FYEYAGPDE-VVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTV-HADLSNYDEDGAWPVLLDEFVEWQKVRQT 236          
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCNL5_RAT (DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.077e-32
Identity = 70/187 (37.43%), Postives = 112/187 (59.89%), Query Frame = -3
Query:  205 FYSYANKSSGMIDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQT 765
            FY YA     ++ PEG+E  C DI V   ++ +L+LAWK++AE  G+FT EEW +G+ +L+ D   KL+     L  ++   ++F++ Y +AF +   ++ Q+S+DI++   +L L+LG  +        +YL+ QS Y+V+N DQW     F   +   D +NYD + AWP++LD FVEW K +QT
Sbjct:   55 FYEYAGPDE-VVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTV-HADLSNYDEDGAWPVLLDEFVEWQKIRQT 236          
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCNL5_MOUSE (DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.077e-32
Identity = 70/187 (37.43%), Postives = 112/187 (59.89%), Query Frame = -3
Query:  205 FYSYANKSSGMIDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQT 765
            FY YA     ++ PEG+E  C DI V   ++ +L+LAWK++AE  G+FT EEW +G+ +L+ D   KL+     L  ++   ++F++ Y +AF +   ++ Q+S+DI++   +L L+LG  +        +YL+ QS Y+V+N DQW     F   +   D +NYD + AWP++LD FVEW K +QT
Sbjct:   55 FYEYAGPDE-VVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTV-HADLSNYDEDGAWPVLLDEFVEWQKIRQT 236          
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCNL5_PONAB (DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.512e-31
Identity = 69/187 (36.90%), Postives = 111/187 (59.36%), Query Frame = -3
Query:  205 FYSYANKSSGMIDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQT 765
            FY YA     ++ PEG+E  C DI V   ++ +L+LAWK++AE  G+FT EEW +G+ +L+ D   KL+     L  ++   ++F++ Y +AF +   ++ Q+S+DI++   +L L+LG  +        +Y + QS Y+V+N DQW     F   +   D +NYD + AWP++LD FVEW K +QT
Sbjct:   55 FYEYAGPDE-VVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYPE-QSKYRVMNKDQWYNVLEFSRAV-HADLSNYDEDGAWPVLLDEFVEWQKVRQT 236          
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCNL5_BOVIN (DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.512e-31
Identity = 69/186 (37.10%), Postives = 111/186 (59.68%), Query Frame = -3
Query:  208 FYSYANKSSGMIDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQ 765
            FY YA     ++ PEG+E  C DI V   ++ +L+LAWK++AE  G+FT EEW +G+ +L+ D   KL+     L  ++   ++F++ Y +AF +   ++ Q+S+DI++   +L L+LG  +        +YL+ QS Y+V+N DQW     F   +   D +NYD + AWP++LD FVEW K +Q
Sbjct:   54 FYEYAGPDE-VVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTV-HADLSNYDEDGAWPVLLDEFVEWHKVRQ 234          
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCNL3_XENTR (DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1d3 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.688e-25
Identity = 68/190 (35.79%), Postives = 101/190 (53.16%), Query Frame = -3
Query:  223 MERIDNLFYSYANKSSGMIDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCL-TEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYL-KIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEW 786
            ++RI+ LF+ Y ++    I  EG+E  C+D+ V  T+ R+L+LAWK +A     FT  E+  G KA+ AD +  +    P L  E K+   F+D Y F F++ L +EE Q+S+  E    L  LV        +D  +++L +  S  K I+ D W  F  F   I  PD +NY  + AWP + D FVEW
Sbjct:   87 VQRIEELFWRYKDEREDAILEEGMERFCNDLYVDPTEFRVLVLAWKFQAATMCKFTRREFFEGCKAINADGIEGICARFPSLLNEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNKPLILDQWLDFLTENPSGIKGISRDTWNMFLNFTQVIG-PDLSNYSEDEAWPSLFDTFVEW 275          
BLAST of CX046294 vs. ExPASy Swiss-Prot
Match: DCN1M_DICDI (DCN1-like protein 2 OS=Dictyostelium discoideum GN=DDB_G0272016 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.761e-25
Identity = 66/176 (37.50%), Postives = 96/176 (54.55%), Query Frame = -3
Query:  208 IDPEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKR-PTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQ 732
            I PEGI   CSDI ++     IL+LAW M A K GYF+  E+  G + L+   ++ LKK L    +++K   T F D Y +AF +    E +KSVD+ +  E+L L+L             +L  Q + K IN DQW+ F  F   +   D +NYD + AWPL+LD F EW++ ++
Sbjct:   94 IGPEGIARFCSDIGLAPDSFEILVLAWTMNASKMGYFSKNEFSSGFEKLQCSDLSTLKKQLNSTSQKLKHDSTKFTDLYKYAFGFASEVESKKSVDLGTAAEMLKLLLPE--GPHTTNFAAFLCTQPN-KSINKDQWLCFLEFSRTVK-ADLSNYDDSEAWPLLLDQFSEWVQQEK 265          
The following BLAST results are available for this feature:
BLAST of CX046294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
DCNL4_MOUSE5.789e-3443.01DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=... [more]
DCNL4_HUMAN5.789e-3442.47DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=... [more]
DCNL4_DANRE4.149e-3239.78DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=4... [more]
DCNL5_HUMAN5.418e-3237.43DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=... [more]
DCNL5_RAT7.077e-3237.43DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d... [more]
DCNL5_MOUSE7.077e-3237.43DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=... [more]
DCNL5_PONAB3.512e-3136.90DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=... [more]
DCNL5_BOVIN3.512e-3137.10DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 ... [more]
DCNL3_XENTR1.688e-2535.79DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1... [more]
DCN1M_DICDI3.761e-2537.50DCN1-like protein 2 OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7B01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7B01-C1-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046294 ID=CX046294; Name=CX046294; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTGGTTTGTGTACTTTCAATAGTCCTGTAAAACAGATCAATTACA
ATAAAAATAATTAAAGAATGAAGCACTTGCACTTCTGTAAGGTGTAAGAC
AACTCCTAAAGCAAGTACGTTAATTTTGAACATATATTCACCTACTTATG
TAAAAATGGCAGTTTACAGCTGGGAATCAGGTCGGTTAAAAGAACCAGAG
TTTATGTCTGCTTCGCTTTCATCCATTCTACAAAATTGTCCAGGACCAAG
GGCCAAGCAAGATTTGGATCGTAATTATTGAAGTCCGGGAAGCTTATCTC
ATTGCAGAACCGGTAAAACCCCATCCACTGATCCATGTTAATTACCTTAT
AATCAGATTGAATCTTTAGATACTCAATCAAATAGTCAACCTGGGCACGG
TATTGGGATCCTAATACAAGACCCAGTAATTCGCAGACACTCTCTATGTC
TACACTCTTTTGTTTCTCCTCTGTTAAGCAATACCGGAATGCAAAAGCAT
AGAAATCTTGAAAGTTTGTTGGCCTCTTCACCTCTTTCTCCAGATCAGGA
AGGGCCTTCTTTAATTTATTTACAGTGTCAGCCCTCAATGCTTTTAGGCC
TCTCCGCCATTCCTCCAGAGTAAAATACCCTTGCTTTTCCGCTTTCATTT
TCCAAGCAAGCATCAAGATCCGAACATCAGTATGACTGACTTCGATATCT
GAACACAGACTTTCAATTCCTTCTGGGTCAATCATGCCAGAAGACTTATT
CGCATACGAATAAAACAGGTTATCGATTCGTTCCATCTCTTTCGAAGATG
CTTTACTTGAGGCGGAGCGAAAGAGATCCGTGGCGTCGGTTGAATTAGTT
TGACCCG
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