CX046291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046291 vs. ExPASy Swiss-Prot
Match: WOX8_ORYSJ (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.216e-45 Identity = 50/63 (79.37%), Postives = 58/63 (92.06%), Query Frame = 1 Query: 295 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARFQKEAVSV 483 WTPTP+QLQILE+IFDQG GTPSKQKIK+IT ELSQHGQISETNVYNWFQNRRAR +++ ++ Sbjct: 93 WTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAAL 155 HSP 2 Score: 91.2781 bits (225), Expect = 4.216e-45 Identity = 45/62 (72.58%), Postives = 54/62 (87.10%), Query Frame = 3 Query: 99 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISA 284 MTDEQ+E LRKQI++YATICEQLVEMH++L+A QD + AG RLGN+YCDPLM GGHKI+A Sbjct: 30 MTDEQMEVLRKQISIYATICEQLVEMHRALTAQQD-SIAGMRLGNLYCDPLMVP-GGHKITA 89
BLAST of CX046291 vs. ExPASy Swiss-Prot
Match: WOX13_ARATH (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana GN=WOX13 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 8.411e-43 Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 1 Query: 295 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARFQKE 471 WTPTPVQLQILE IFDQGTGTPSKQKIK+IT ELSQHGQI+E NVYNWFQNRRAR +++ Sbjct: 100 WTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRK 158 HSP 2 Score: 85.8853 bits (211), Expect = 8.411e-43 Identity = 43/62 (69.35%), Postives = 53/62 (85.48%), Query Frame = 3 Query: 99 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISA 284 MTDEQ ETLRKQIA+Y TICE+LVEMHK+L+A QDL AGGR+G +Y DP+M+S GHK++A Sbjct: 38 MTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDL--AGGRMGGLYADPMMSS-LGHKMTA 96
BLAST of CX046291 vs. ExPASy Swiss-Prot
Match: WOX14_ARATH (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana GN=WOX14 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.411e-32 Identity = 41/59 (69.49%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 295 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARFQKE 471 WTPT QLQILESI+D+G+GTP++++I+EI ELS+HGQI+ETNVYNWFQNRRAR +++ Sbjct: 96 WTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRK 154 HSP 2 Score: 63.1586 bits (152), Expect = 1.411e-32 Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 3 Query: 99 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKIS 281 MT+EQ+E LRKQIAVYA IC+QLV +H SLS++ L++ + Y DP+ S H+IS Sbjct: 31 MTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSHRIS 91
BLAST of CX046291 vs. ExPASy Swiss-Prot
Match: WOX10_ARATH (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana GN=WOX10 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.639e-30 Identity = 39/59 (66.10%), Postives = 52/59 (88.14%), Query Frame = 1 Query: 295 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARFQKE 471 WTPT QLQILE+I+ +G+GTP+ ++IKEIT+ELS+HGQI E NVY+WFQNRRAR +++ Sbjct: 80 WTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRK 138 HSP 2 Score: 62.7734 bits (151), Expect = 1.639e-30 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 3 Query: 99 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKIS 281 MTDEQ+ETLRKQIA+YA +C+QLV +H SLS+ L++ + Y DP++ S H +S Sbjct: 15 MTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAHGMS 75
BLAST of CX046291 vs. ExPASy Swiss-Prot
Match: WOX8_ARATH (WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.466e-11 Identity = 27/55 (49.09%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 295 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 459 W P P Q++ILESIF+ GT P +++I+ I + L ++GQI + NV+ WFQNR++R Sbjct: 56 WNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSR 110
BLAST of CX046291 vs. ExPASy Swiss-Prot
Match: WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.324e-11 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 295 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 459 W PTP QL++LE ++ QGT TPS I++IT +L ++G+I NV+ WFQN +AR Sbjct: 77 WNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKAR 131 The following BLAST results are available for this feature:
BLAST of CX046291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046291 ID=CX046291; Name=CX046291; organism=Citrus sinensis; type=EST; length=641bpback to top |