CX046189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046189 vs. ExPASy Swiss-Prot
Match: SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.778e-17 Identity = 72/252 (28.57%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 67 VDWTELPAELIEAISKKLKFYSDYIRFQRVCRNWRLSI-PKTPNHXXXXXXXXXXXXXXXXXXXXTHCAFFNLSANKVHLLNLPEASLRSRHCGSSHGWVIILDE----TPAILLLNPLTRVKIHLPPLSSFPNVVSFSYF---DIGREYTVASYLPAGAGDRYNCSLRQMRDSFIKKIVLSSSPVDKDYNFLAVAILNQTADLAYCRNGDQCWTLIEGMQSYSEDVIYRKGSFYAVDKAGLITVCDIAGDK 798 VDW+ LP +L++ ISK L+ D I+F+ VC +WR + PK+P F LS + L+ E + S S GW+I ++E + LL+PL + +P +FP V+ S F ++GRE+ + + G + +++K V+ D DY F+ + I + + LA R+ D+ WT+I M S +DV+ G F+AVD G V D + K Sbjct: 2 VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSP----LPTHHLPILPDNGGSLFPDSAVGFRLSQRSILLIKPHEPCIES----DSFGWLIKVEEDLNVPRKVTLLDPLCDTRNSIP--ENFPRVLDMSKFKVRELGREFKLHYFNTVG---------DIVESLYLEKAVVKYLDCDGDYKFVLLTI-HVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSSLK 233
BLAST of CX046189 vs. ExPASy Swiss-Prot
Match: FB294_ARATH (Putative F-box protein At5g55150 OS=Arabidopsis thaliana GN=At5g55150 PE=4 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.346e-11 Identity = 46/154 (29.87%), Postives = 75/154 (48.70%), Query Frame = 1 Query: 343 GSSHGWVIILDETPAILLLNPLTRVKIHLPPLSSFPNVVSFSYFDIGREYTVASYLPAGAGDRYNCSLRQMRDSFIKKIVLSSSPVDKDYNFLAVAILNQTADLAYCRNGDQCWTLIEGMQSYSEDVIYRKGSFYAVDKAGLITVCDIAGDKDK 804 G+ WV T LL P+T+ LPPL SF D+ R + +P + +FIKK V S+S +D ++ + + I N LA+CR GD+ WT +E + S +D+++ G F+A+D+ G I C+++ + K Sbjct: 85 GNQQAWVC--GSTLGFLLTKPVTKSVTSLPPLISFE--------DVQRLLQSQAIIPDS----------EALKNFIKKAVSSTSLLDDEW--VVLVIYNTDRKLAFCRRGDKQWTDLESVASSVDDIVFCNGVFFAIDRLGEIYHCELSANNPK 216 The following BLAST results are available for this feature:
BLAST of CX046189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046189 ID=CX046189; Name=CX046189; organism=Citrus sinensis; type=EST; length=840bpback to top |