DN618039

Overview
NameDN618039
Unique NameDN618039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:711..1317. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 3.743e-84
Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = -2
Query:  116 KAAEVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD 583
            K   VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD
Sbjct:  200 KGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD 355          

HSP 2 Score: 26.5646 bits (57), Expect = 3.743e-84
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1
Query:  573 VAAEDLIVKGGR 608
            VAAEDLIVKGGR
Sbjct:  192 VAAEDLIVKGGR 203          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 7.612e-79
Identity = 142/156 (91.03%), Postives = 148/156 (94.87%), Query Frame = -2
Query:  116 KAAEVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD 583
            K   VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK L+SIGMI+ VPGMKALDMN AEDAIVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG PNALDG+YVGG+HPELILAAADSAE AD
Sbjct:  196 KGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSYVGGIHPELILAAADSAEIAD 351          

HSP 2 Score: 26.5646 bits (57), Expect = 7.612e-79
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1
Query:  573 VAAEDLIVKGGR 608
            VAAEDLIVKGGR
Sbjct:  188 VAAEDLIVKGGR 199          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 9.067e-74
Identity = 135/156 (86.54%), Postives = 143/156 (91.67%), Query Frame = -2
Query:  116 KAAEVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD 583
            K   VGGVVTNWALV+ NH TQSCMDPNVMEAK+VVSSCGHDGPFGATGVKRLKSIGMI+ VPGMKALDMN+AEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA  LALK+LG PNA+DGT VG + PEL+LAAADSAET D
Sbjct:  193 KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTLVGNLSPELVLAAADSAETVD 348          

HSP 2 Score: 24.2534 bits (51), Expect = 9.067e-74
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = -1
Query:  573 VAAEDLIVKGGR 608
            VAAEDLIVKG R
Sbjct:  185 VAAEDLIVKGNR 196          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.290e-68
Identity = 126/150 (84.00%), Postives = 135/150 (90.00%), Query Frame = -2
Query:  134 KAAEVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAAD 583
            +   VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL+ IGMI  VPGMKALDMN+AED IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT    +  EL++A  D
Sbjct:  199 RGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLREELMIAYKD 348          

HSP 2 Score: 23.8682 bits (50), Expect = 5.290e-68
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = -1
Query:  573 VAAEDLIVKGGR 608
            VA EDLIV+GGR
Sbjct:  191 VAVEDLIVRGGR 202          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 5.380e-66
Identity = 127/154 (82.47%), Postives = 137/154 (88.96%), Query Frame = -2
Query:  134 KAAEVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHP----ELILAAAD 583
            +   VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL+ IGMI  VPGMKALDMN+AED IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT +  V P    E ++A+ D
Sbjct:  196 RRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGT-IPEVSPALREEFVIASKD 348          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.334e-40
Identity = 80/124 (64.52%), Postives = 99/124 (79.84%), Query Frame = -2
Query:  212 KAAEVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 583
            +   + GVVTNW LVSM+HD QSCMDPN + A +V+S+ GHD P GA  VKRL S+G IE++ GM+ LDMN AEDAIV+ TRE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA  ALK
Sbjct:  190 EGVRISGVVTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALK 313          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 5.070e-40
Identity = 79/124 (63.71%), Postives = 98/124 (79.03%), Query Frame = -2
Query:  212 KAAEVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 583
            +   + GVVTNW LVSM+HD QSCMDPN + A +++S+ GHDGP GA  VKRL S+  IE++ GM+ LDMN AEDAIV+ TRE+VPG+IV GME++E+DGA RMGPTFGAM +SG KAA  ALK
Sbjct:  186 EGVRIAGVVTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.130e-38
Identity = 74/121 (61.16%), Postives = 96/121 (79.34%), Query Frame = -2
Query:  212 EVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 574
            ++ GVV NW LV+++HD  SCMDPN + A V++S+ GHDGPFGA   KRL S+G ++++ GM+ LDMNSAEDAIV+ TREV  G+I+ GME++EIDG  RMGPTFGAM++SG KAA  ALK
Sbjct:  196 QIAGVVVNWTLVTLHHDDHSCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALK 316          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 6.198e-38
Identity = 79/133 (59.40%), Postives = 95/133 (71.43%), Query Frame = -2
Query:  173 VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYV 571
            + GVVTNW LVS+NH  QSCMDPN + A +VVS+ GHDGPFGA  VKRL S  ++  +  M+ LDMN AED IV+ TREV PGMIV GME++E DGA RMGPTFG MM SG KAA  AL    +  A++  Y+
Sbjct:  196 IAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEALAIFDERKAVNEKYL 328          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.803e-37
Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = -2
Query:  170 VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVG 571
            + G VTNW LVS+NHD QSCMDP+ + A +V S  GHDGPFGA  VKR+ S G+ E +  M+ LDM  AED I   TRE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL+SL +    +G  VG
Sbjct:  202 IAGCVTNWTLVSLNHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHIANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDRVKIEEGEVVG 335          
The following BLAST results are available for this feature:
BLAST of DN618039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
THI4_CITSI3.743e-8498.08Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL7.612e-7991.03Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH9.067e-7486.54Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE5.290e-6884.00Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE5.380e-6682.47Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI4_FUSSH1.334e-4064.52Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSOX5.070e-4063.71Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_ASPOR2.130e-3861.16Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI2_SCHPO6.198e-3859.40Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_UROFA1.803e-3755.97Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618039 ID=DN618039; Name=DN618039; organism=Citrus sinensis; type=EST; length=608bp
ATTATTGCGCATCAACCATCCATCACAACCACCTAAATACAACTACTTTT
TTGCCAGAGTTTATTTGCATGCACACAGCTGATGAGTGATGATGCCTGTT
ATTATCAAATTAACCATCAGCAGTCTCAGCAGAATCAGCTGCAGCTAAGA
TCAGCTCAGGGTGAACACCTCCCACATATGTACCGTCTAATGCATTCGGC
TGGCCCAGTGACTTCAACGCCAAATGCGCAGCCTTCTGCCCCGATATCAT
CATTGCTCCAAATGTTGGCCCCATTCTAGGAGCACCATCAATCTCGGCAA
CTTCCATGCCGGTAACTATCATACCAGGCACAACCTCCCTGGTCAGCCTC
ACAATAGCATCTTCTGCAGAGTTCATGTCCAGTGCCTTCATTCCAGGCAC
TTCCTCAATCATTCCGATACTCTTCAACCTCTTTACTCCAGTGGCCCCAA
AAGGCCCATCATGGCCACAAGAGCTCACAACCACCTTCGCTTCCATTACA
TTGGGATCCATGCAAGACTGTGTATCGTGATTCATTGACACCAACGCCCA
GTTGGTCACCACACCACCAACTTCTGCCGCCTTTGACTATCAAGTCCTCG
GCTGCCAC
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