DN618024

Overview
NameDN618024
Unique NameDN618024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2287 contig Csv1_Contig2287:381..928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 8.552e-91
Identity = 162/182 (89.01%), Postives = 172/182 (94.51%), Query Frame = 1
Query:    1 LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTS 546
            +EQWEQIRQLMRSK LLPFFDSAYQGFASGSLDADAQSVR+FVADGGECL AQSYAKNMGLYGERVGALSIVCKT DVAS+VESQLKLVIRPMYSSPP+HGASIVA ILKD  +Y EWTLELKAMADRIISMRQ+LF+AL A+GTPGDWSHI+KQIGMFTFTGLNSEQV FMT EYHIY+TS
Sbjct:  195 IEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDADAQSVRIFVADGGECLAAQSYAKNMGLYGERVGALSIVCKTADVASKVESQLKLVIRPMYSSPPLHGASIVAAILKDGDLYNEWTLELKAMADRIISMRQELFNALQAKGTPGDWSHIVKQIGMFTFTGLNSEQVTFMTNEYHIYLTS 376          
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 325.094 bits (832), Expect = 1.365e-88
Identity = 159/181 (87.85%), Postives = 168/181 (92.82%), Query Frame = 1
Query:    4 EQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTS 546
            EQWEQIRQLMRSK LLPFFDSAYQGFASGSLD DAQSVR FVADGGECL+AQSYAKNMGLYGERVGALSIVCK+ DVAS+VESQ+KLV+RPMYSSPPIHGASIVATILK S MY  WT+ELK MADRI SMRQQLF+A+ ARGTPGDWSHIIKQIGMFTFTGLN EQV FMTKE+HIYMTS
Sbjct:  196 EQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDTDAQSVRTFVADGGECLIAQSYAKNMGLYGERVGALSIVCKSADVASKVESQVKLVVRPMYSSPPIHGASIVATILKSSDMYNNWTIELKEMADRIKSMRQQLFEAIQARGTPGDWSHIIKQIGMFTFTGLNKEQVEFMTKEFHIYMTS 376          
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 2.329e-88
Identity = 157/182 (86.26%), Postives = 170/182 (93.41%), Query Frame = 1
Query:    1 LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTS 546
            ++QWEQIR+LMRSKGL+PFFDSAYQGFASGSLD DA+ +RMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK+ DVA RVESQLKLVIRPMYSSPPIHGASIVA IL+D  ++ EWTLELKAMADRIISMR+QLF+AL  RGTPGDWSHIIKQIGMFTFTGLN  QV+FMTKEYHIYMTS
Sbjct:  239 IQQWEQIRKLMRSKGLMPFFDSAYQGFASGSLDTDAKPIRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKSADVAGRVESQLKLVIRPMYSSPPIHGASIVAVILRDKNLFNEWTLELKAMADRIISMRKQLFEALRTRGTPGDWSHIIKQIGMFTFTGLNPAQVSFMTKEYHIYMTS 420          
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 6.776e-88
Identity = 161/182 (88.46%), Postives = 169/182 (92.86%), Query Frame = 1
Query:    1 LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTS 546
            L+QWEQIRQLMRSK LLPFFDSAYQGFASGSLD DAQSVRMFVADGGE L+AQSYAKNMGLYGERVGALSIVC + DVA RVESQLKLVIRPMYS+PPIHGASIVATILKDS M+ EWT+ELK MADRIISMRQQLFDAL  R TPGDWSHIIKQIGMFTFTGLNS+QVAFM +EYHIYMTS
Sbjct:  197 LDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGGELLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIVATILKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTS 378          
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 2.575e-87
Identity = 159/182 (87.36%), Postives = 170/182 (93.41%), Query Frame = 1
Query:    1 LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTS 546
            LEQWEQIRQL+RSK LLPFFDSAYQGFASGSLDADAQ VR+FVADGGE LVAQSYAKNMGLYGERVGALSIV K+ DV+SRVESQLKLVIRPMYSSPPIHGASIVA ILKD  +Y +WT+ELKAMADRII+MRQQLFDAL ARGTPGDWSHIIKQIGMFTFTGLN EQV+ +TKEYHIY+TS
Sbjct:  208 LEQWEQIRQLIRSKSLLPFFDSAYQGFASGSLDADAQPVRLFVADGGELLVAQSYAKNMGLYGERVGALSIVSKSADVSSRVESQLKLVIRPMYSSPPIHGASIVAAILKDRDLYNDWTIELKAMADRIINMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNPEQVSILTKEYHIYLTS 389          
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 8.572e-83
Identity = 146/180 (81.11%), Postives = 165/180 (91.67%), Query Frame = 1
Query:    4 EQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMT 543
            EQWE+IR+L+RSK LLPFFDSAYQGFASGSLDADAQ+VRMFVADGGECL+AQSYAKNMGLYGER+G+L+IVC +EDVA +VE+Q+ LV+RPMY +PPIHGASIVATILK+S MY +WT+ELK MADRIISMRQQL+ AL ARGTPGDWSHIIK IGMFTFTGL+ EQV  M KEYHIYMT
Sbjct:  194 EQWEKIRRLVRSKSLLPFFDSAYQGFASGSLDADAQAVRMFVADGGECLIAQSYAKNMGLYGERIGSLTIVCTSEDVAKKVENQVLLVVRPMYLTPPIHGASIVATILKNSDMYNDWTIELKGMADRIISMRQQLYAALEARGTPGDWSHIIKHIGMFTFTGLSEEQVRLMAKEYHIYMT 373          
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 4.010e-56
Identity = 103/181 (56.91%), Postives = 138/181 (76.24%), Query Frame = 1
Query:    4 EQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMT 543
            EQW +I  +++ K  +PFFD AYQGFASGSLD DA SVR+F   G E  VAQSY+KN+GLY ER+GA+++VC + D A+RV+SQLK + RPMYS+PP+HGA IVA ++ D TM+ EW  E++ MA RI ++RQ+L+D+L ++   G DWS I+KQIGMF+FTGLN  Q   MT ++H+YMT
Sbjct:  243 EQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFAERGMEFFVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIARPMYSNPPVHGARIVANVVGDVTMFSEWKAEMEMMAGRIKTVRQELYDSLVSKDKSGKDWSFILKQIGMFSFTGLNKAQSDNMTDKWHVYMT 423          
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 6.840e-56
Identity = 102/181 (56.35%), Postives = 142/181 (78.45%), Query Frame = 1
Query:    4 EQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMT 543
            EQWE+I  +++ K  +PFFD AYQGFASGSLD DA SVR+FVA G E LVAQSY+KN+GLY ER+GA++++  + + A+RV+SQLK + RPMYS+PP+HGA IVA I+ +  ++ EW +E++ MA RI ++RQQL+D++S++   G DWS I+KQIGMF++TGLN  Q   MT ++H+YMT
Sbjct:  244 EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGLEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRIARPMYSNPPVHGARIVADIVGNPALFDEWKVEMEMMAGRIKNVRQQLYDSISSKDKSGKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMT 424          
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.290e-54
Identity = 103/180 (57.22%), Postives = 129/180 (71.67%), Query Frame = 1
Query:    4 EQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMT 543
            EQW++I ++ + +G    FD AYQGFASGS + DA +VRMFV DG    + QS+AKN GLYGER+GA SI+ +T D A  VESQLK++IRPMYS+PP++GA +V  ILKD  +  EW  E+K MADRII+MR+QL   L   G+  DWSHI  QIGMF FTGL  EQV  +  EYHIY+T
Sbjct:  218 EQWKKISEICKERGHFVLFDFAYQGFASGSPEKDAAAVRMFVEDGHNIALCQSFAKNFGLYGERIGAFSILTETSDQALNVESQLKILIRPMYSNPPVYGARLVQAILKDKELTNEWRSEVKGMADRIINMREQLVKYLKKHGSTRDWSHITTQIGMFCFTGLTPEQVDRLANEYHIYLT 397          
BLAST of DN618024 vs. ExPASy Swiss-Prot
Match: AATM_MOUSE (Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.874e-54
Identity = 103/180 (57.22%), Postives = 128/180 (71.11%), Query Frame = 1
Query:    4 EQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMT 543
            EQW++I  +++ K L  FFD AYQGFASG  D DA +VR F+  G    + QSYAKNMGLYGERVGA ++VCK  + A RVESQLK++IRP+YS+PP++GA I ATIL    + K+W  E+K MADRIISMR QL   L   G+  +W HI  QIGMF FTGL  EQV  +TKE+ +YMT
Sbjct:  224 EQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMT 403          
The following BLAST results are available for this feature:
BLAST of DN618024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AATC_DAUCA8.552e-9189.01Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AAT2_ARATH1.365e-8887.85Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AAT3_ARATH2.329e-8886.26Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATC_ORYSJ6.776e-8888.46Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AAT1_MEDSA2.575e-8787.36Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
AAT4_ARATH8.572e-8381.11Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]
AAT5_ARATH4.010e-5656.91Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_LUPAN6.840e-5656.35Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AATM_DICDI1.290e-5457.22Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AATM_MOUSE2.874e-5457.22Aspartate aminotransferase, mitochondrial OS=Mus m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618024 ID=DN618024; Name=DN618024; organism=Citrus sinensis; type=EST; length=548bp
CTTGAGCAGTGGGAGCAGATCAGGCAGCTGATGAGGTCAAAAGGATTGTT
ACCTTTCTTTGACAGTGCTTATCAGGGTTTCGCAAGTGGTAGCCTAGATG
CAGATGCACAATCTGTTCGCATGTTTGTGGCAGATGGTGGCGAATGCCTG
GTAGCTCAGAGTTATGCGAAAAACATGGGACTCTATGGGGAACGTGTCGG
CGCCCTCAGCATTGTCTGCAAGACAGAAGATGTGGCAAGCAGGGTTGAAA
GCCAGTTGAAACTCGTGATTAGGCCCATGTACTCTAGTCCACCTATTCAC
GGGGCCTCTATTGTGGCTACAATTCTCAAGGACAGCACTATGTATAAAGA
GTGGACTCTTGAACTGAAAGCGATGGCTGACCGGATTATAAGCATGCGTC
AGCAACTATTTGATGCTCTGTCTGCTAGAGGCACTCCAGGAGACTGGAGT
CACATTATCAAGCAAATAGGAATGTTTACATTCACAGGGCTGAACAGTGA
ACAAGTTGCCTTCATGACCAAGGAGTATCACATTTATATGACATCTGA
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