DN618023

Overview
NameDN618023
Unique NameDN618023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length501
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2287 contig Csv1_Contig2287:63..562. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.265e-39
Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = -1
Query:  235 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRMG 501
            K MADRI SMRQQLF+A+ ARGTPGDWSHIIKQIGMFTFTGLN EQV FMTKE+HIYMTSDGRISMAGLSSKTVPHL DA+HAAVTR+G
Sbjct:  317 KEMADRIKSMRQQLFEAIQARGTPGDWSHIIKQIGMFTFTGLNKEQVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAMHAAVTRLG 405          
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.277e-39
Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = -1
Query:  244 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVT 501
            KAMADRIISMRQ+LF+AL A+GTPGDWSHI+KQIGMFTFTGLNSEQV FMT EYHIY+TSDGRISMAGLSS+TVPHL DAIHAAVT
Sbjct:  317 KAMADRIISMRQELFNALQAKGTPGDWSHIVKQIGMFTFTGLNSEQVTFMTNEYHIYLTSDGRISMAGLSSRTVPHLADAIHAAVT 402          
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.071e-38
Identity = 77/87 (88.51%), Postives = 81/87 (93.10%), Query Frame = -1
Query:  241 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTR 501
            KAMADRIISMR+QLF+AL  RGTPGDWSHIIKQIGMFTFTGLN  QV+FMTKEYHIYMTSDGRISMAGLSSKTVPHL DAIHA VT+
Sbjct:  361 KAMADRIISMRKQLFEALRTRGTPGDWSHIIKQIGMFTFTGLNPAQVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAIHAVVTK 447          
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.071e-38
Identity = 77/88 (87.50%), Postives = 82/88 (93.18%), Query Frame = -1
Query:  238 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 501
            KAMADRII+MRQQLFDAL ARGTPGDWSHIIKQIGMFTFTGLN EQV+ +TKEYHIY+TSDGRISMAGLSSKTVPHL  AIHA VTR+
Sbjct:  330 KAMADRIINMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNPEQVSILTKEYHIYLTSDGRISMAGLSSKTVPHLAHAIHAVVTRV 417          
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.115e-38
Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = -1
Query:  238 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 501
            K MADRIISMRQQLFDAL  R TPGDWSHIIKQIGMFTFTGLNS+QVAFM +EYHIYMTSDGRISMAGLS +T+PHL DAIHAAVT++
Sbjct:  319 KGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIHAAVTKL 406          
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 9.380e-35
Identity = 72/88 (81.82%), Postives = 75/88 (85.23%), Query Frame = -1
Query:  238 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 501
            K MADRIISMRQQL+ AL ARGTPGDWSHIIK IGMFTFTGL+ EQV  M KEYHIYMT DGRISMA LSSKTVP L DAIHA VTR+
Sbjct:  315 KGMADRIISMRQQLYAALEARGTPGDWSHIIKHIGMFTFTGLSEEQVRLMAKEYHIYMTYDGRISMASLSSKTVPQLADAIHAVVTRI 402          
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AATC_CHICK (Aspartate aminotransferase, cytoplasmic OS=Gallus gallus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.189e-21
Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = -1
Query:  238 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 501
            K MADR++ MR +L   L + GTPG W+HI  QIGMF+FTGLN +QV +M KE HIY+ + GRI+M GL++K + ++  +IH AVT++
Sbjct:  324 KTMADRVLLMRSELRSRLESLGTPGTWNHITDQIGMFSFTGLNPKQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSIHEAVTKI 411          
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AATC_MOUSE (Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = -1
Query:  238 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 501
            K MADRI++MR +L   L A  TPG WSHI +QIGMF+FTGLN +QV ++  E HIY+   GRI+M GL++K + ++  +IH AVT++
Sbjct:  325 KTMADRILTMRSELRARLEALKTPGTWSHITEQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 412          
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AATC_PIG (Aspartate aminotransferase, cytoplasmic OS=Sus scrofa GN=GOT1 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-20
Identity = 46/88 (52.27%), Postives = 63/88 (71.59%), Query Frame = -1
Query:  238 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 501
            K MADRI+SMR +L   L A  TPG W+HI  QIGMF+FTGLN +QV ++  E HIY+   GRI+M GL++K + ++  +IH AVT++
Sbjct:  325 KTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINEKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 412          
BLAST of DN618023 vs. ExPASy Swiss-Prot
Match: AATC_HORSE (Aspartate aminotransferase, cytoplasmic OS=Equus caballus GN=GOT1 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-20
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = -1
Query:  241 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTR 501
            K MADRI+SMR +L   L A  TPG W+HI +QIGMF+FTGLN +QV ++  + HIY+   GRI+M GL++K + ++  +IH AVT+
Sbjct:  325 KTMADRILSMRSELRARLEALKTPGTWNHITEQIGMFSFTGLNPKQVEYLVNQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTK 411          
The following BLAST results are available for this feature:
BLAST of DN618023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
AAT2_ARATH1.265e-3987.64Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AATC_DAUCA6.277e-3988.37Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AAT3_ARATH1.071e-3888.51Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AAT1_MEDSA1.071e-3887.50Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
AATC_ORYSJ3.115e-3885.23Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AAT4_ARATH9.380e-3581.82Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]
AATC_CHICK1.189e-2152.27Aspartate aminotransferase, cytoplasmic OS=Gallus ... [more]
AATC_MOUSE7.709e-2152.27Aspartate aminotransferase, cytoplasmic OS=Mus mus... [more]
AATC_PIG1.717e-2052.27Aspartate aminotransferase, cytoplasmic OS=Sus scr... [more]
AATC_HORSE2.243e-2051.72Aspartate aminotransferase, cytoplasmic OS=Equus c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A04_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618023 ID=DN618023; Name=DN618023; organism=Citrus sinensis; type=EST; length=501bp
TTTTTTTTTTTTTTTTTAACATTCGCAACTTCTCGTTTTTCTTCTACTTA
ATAAACATGTCAAGTTTCTGGTGGAAAGACAAGAATACAACACCAAAACC
AAAAGAACAAAATTTTCTTAATGTAAAACCTTTATTTATGCATTTTCTAG
TTCTACAAACTCATTTTTGCATTGCTGAGGGTGACTGAAAACCAAACAAT
TCTTACGGCATGAATTCTTGTCTGATTAATCTTAGCCCATTCGGGTTACA
GCAGCATGTATAGCATCGGTAAGATGAGGAACTGTCTTTGAACTAAGACC
TGCCATGCTAATCCTCCCATCAGATGTCATATAAATGTGATACTCCTTGG
TCATGAAGGCAACTTGTTCACTGTTCAGCCCTGTGAATGTAAACATTCCT
ATTTGCTTGATAATGTGACTCCAGTCTCCTGGAGTGCCTCTAGCAGACAG
AGCATCAAATAGTTGCTGACGCATGCTTATAATCCGGTCAGCCATCGCTT
T
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