DN618010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618010 vs. ExPASy Swiss-Prot
Match: LMBD1_ARATH (LIMR family protein At3g08930 OS=Arabidopsis thaliana GN=At3g08930 PE=2 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 2.276e-40 Identity = 79/105 (75.24%), Postives = 85/105 (80.95%), Query Frame = 3 Query: 294 MGDFNXXXXXXXXXXXXXXXXXNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIP 608 MGDFN ++YLLVNYQHPDDANQAYFPKFVVV GLS+A ISILMLPADVANR ACRHAIYNGACNLTLPMKDLWLA+YI+DA+LVFFVIP Sbjct: 1 MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILMLPADVANRHACRHAIYNGACNLTLPMKDLWLAIYIVDAILVFFVIP 105
BLAST of DN618010 vs. ExPASy Swiss-Prot
Match: LMBD2_ARATH (LIMR family protein At5g01460 OS=Arabidopsis thaliana GN=At5g01460 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.882e-40 Identity = 79/105 (75.24%), Postives = 85/105 (80.95%), Query Frame = 3 Query: 294 MGDFNXXXXXXXXXXXXXXXXXNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIP 608 MGDFN ++YLLVNYQHPDDANQAYFPKFVVV GLS+A ISILMLPADVANR ACRH+IYNGACNLTLPMKDLWLAVYI+DAVLVFF+IP Sbjct: 1 MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILMLPADVANRHACRHSIYNGACNLTLPMKDLWLAVYIVDAVLVFFIIP 105
BLAST of DN618010 vs. ExPASy Swiss-Prot
Match: LMBD1_ORYSJ (LIMR family protein Os06g0128200 OS=Oryza sativa subsp. japonica GN=Os06g0128200 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.994e-36 Identity = 75/105 (71.43%), Postives = 82/105 (78.10%), Query Frame = 3 Query: 294 MGDFNXXXXXXXXXXXXXXXXXNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIP 608 MGDFN +VYLL+NYQHPDDANQAYFPK VVVLG++VA +SILMLPADVANRQACR AIY+GAC+LTLPMK LWLAVYI DAVLVF VIP Sbjct: 1 MGDFNVALVIVAAVVSVLVLLVSVYLLINYQHPDDANQAYFPKLVVVLGITVALLSILMLPADVANRQACRRAIYSGACSLTLPMKTLWLAVYIADAVLVFLVIP 105
BLAST of DN618010 vs. ExPASy Swiss-Prot
Match: Y3610_DICDI (LIMR family protein DDB_G0293610 OS=Dictyostelium discoideum GN=DDB_G0293610 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.372e-13 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 3 Query: 360 NVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIP 608 ++YL+ +QHPDD N AYFPK +V+LG+++AA SILMLP DVAN+ G PM LW+ +YI+ AV + P Sbjct: 21 SLYLIAYFQHPDDKNVAYFPKIIVILGITLAATSILMLPLDVANQGG------KGG----FPMDILWIVIYIVVAVFAIVICP 93
BLAST of DN618010 vs. ExPASy Swiss-Prot
Match: Y3707_DICDI (LIMR family protein DDB_G0283707 OS=Dictyostelium discoideum GN=DDB_G0283707 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 5.284e-13 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 360 NVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIP 608 ++YL+ +QHPDD N AYFPK +V+LGL++AA SILMLP DVAN +G PM LW+ +YI AV + P Sbjct: 21 SLYLIAYFQHPDDKNVAYFPKIIVILGLTLAATSILMLPLDVAN---------DGGSG-GFPMDILWIIIYIAVAVFAVVICP 93 The following BLAST results are available for this feature:
BLAST of DN618010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618010 ID=DN618010; Name=DN618010; organism=Citrus sinensis; type=EST; length=609bpback to top |