DN618000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_PARUW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=ispG PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.157e-34 Identity = 66/111 (59.46%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 275 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFD 607 ++KYCE+IH+T RR TR V VGNV IG HPIR+Q+MTT+ T+DV T+E+V+R+ADQG ++VR+TVQG +EADAC IK L+++ Y IPLVADIHF P A+RV + D Sbjct: 3 QKKYCEAIHQTERRPTRIVNVGNVGIGGNHPIRIQSMTTSSTRDVEATIEQVIRLADQGCEIVRVTVQGIKEADACEHIKKGLIKRGYQIPLVADIHFYPPAAMRVVDFVD 113
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis GN=ispG PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25 Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 296 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFD 607 I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TVQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C D Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVD 109
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=ispG PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25 Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 296 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFD 607 I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TVQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C D Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVD 109
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=ispG PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25 Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 296 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFD 607 I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TVQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C D Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVD 109
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_CHLT2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=ispG PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25 Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 296 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFD 607 I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TVQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C D Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQELGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVD 109
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_CHLMU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia muridarum GN=ispG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.986e-24 Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = 2 Query: 311 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFD 607 RRKT +V VGN+ +GSEH I++Q+MTT T DV GTV ++ + + G ++VR+TVQG +E AC +IK+ LVQ+N IPLVADIHF P A+ VA+ D Sbjct: 11 RRKTLSVKVGNLFVGSEHSIKIQSMTTTATTDVEGTVRQIYALQECGCEIVRVTVQGLKEVGACEQIKDRLVQQNVTIPLVADIHFFPQAAIHVADFVD 109
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_CHLPN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia pneumoniae GN=ispG PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.312e-23 Identity = 52/99 (52.53%), Postives = 69/99 (69.70%), Query Frame = 2 Query: 311 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFD 607 RRKT TV +GN+ IGS+H I+ Q+MTT T D+ TVE++ +A+ D+VR+TVQG +EA AC +IK L+ NIPLVADIHF P A+ VA+ D Sbjct: 12 RRKTHTVRIGNLYIGSDHSIKTQSMTTTLTTDIDSTVEQIYALAEHNCDIVRVTVQGIKEAQACEKIKERLIALGLNIPLVADIHFFPQAAMLVADFAD 110
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_CHLFF (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila felis (strain Fe/C-56) GN=ispG PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.534e-20 Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 302 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFD 607 +T RR T +V +G++ +GSEH I++Q+MTT T DV TV ++ + + D+ R+TVQG +EA AC IK L+ +IPLVADIHF P A+ VA+ D Sbjct: 9 QTARRYTHSVKIGSLFVGSEHSIKMQSMTTTPTSDVDATVAQICSLVEAKCDIARVTVQGVKEAQACEHIKERLLTMGLDIPLVADIHFFPQAAMHVADFVD 110
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_CHLCV (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila caviae GN=ispG PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.612e-20 Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 302 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFD 607 + RR T +V +GN+ +GSEH I++Q+MTT T DV TV ++ + + ++ R+TVQG +EA AC IK L+ IPLVADIHF P A+ VA+ D Sbjct: 9 QAARRHTHSVKIGNLYVGSEHSIKMQSMTTTPTADVEATVTQICALVEAKCEIARVTVQGIKEAQACEHIKERLLSMGIAIPLVADIHFFPQAAMHVADFVD 110
BLAST of DN618000 vs. ExPASy Swiss-Prot
Match: ISPG_CELJU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cellvibrio japonicus (strain Ueda107) GN=ispG PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.612e-20 Identity = 54/105 (51.43%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 284 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE 598 +CES VRRK+R +MVGNV +G PI VQ+MT +T DVA TVE++ RI GAD+VR++V A+A L++K NIPLVADIHF +ALRVA+ Sbjct: 2 HCES--PIVRRKSRQIMVGNVPVGGGAPISVQSMTNTETTDVAATVEQIRRIQTAGADIVRVSVPTMEAAEAF-----GLIRKQVNIPLVADIHFDYRIALRVAD 99 The following BLAST results are available for this feature:
BLAST of DN618000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618000 ID=DN618000; Name=DN618000; organism=Citrus sinensis; type=EST; length=609bpback to top |