DN617992

Overview
NameDN617992
Unique NameDN617992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617992 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15
Identity = 47/106 (44.34%), Postives = 62/106 (58.49%), Query Frame = 1
Query:  349 DPSEQIFFTISDLKIGKSL--PIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFG 660
            DP   +FF   +L+ GK +   ++F+    +T+   LPR +A+SIPFSS ELP +L+ F     S  A  M  TL  CEL   KGE K CATSLES++DF    FG
Sbjct:  357 DPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFG 462          
BLAST of DN617992 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15
Identity = 44/104 (42.31%), Postives = 61/104 (58.65%), Query Frame = 1
Query:  349 DPSEQIFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFG 660
            DP+  +FF   DL  GK++ ++F+    +     LPR EA+++PFSS ++P +L  FS    S +A  M  TL  CE  P +GE K CATSLESM+DF     G
Sbjct:  207 DPNVALFFLEKDLHPGKTMAVHFTAT--TAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLG 308          
BLAST of DN617992 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.741e-15
Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  349 DPSEQIFFTISDLKIGKSLPIYFSYKDP-STSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFG 660
            DP+  +FF   DL  GK + + F+ +D        LPR EA ++PF S +    L+ FS    S +AE MK T+ +CE + + GE K+CATSLESM+DF+    G
Sbjct:  170 DPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLG 274          
BLAST of DN617992 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 45/125 (36.00%), Postives = 71/125 (56.80%), Query Frame = 1
Query:  364 IFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPFANYT 738
            +FF    +++G+ LP +F    P+     LPR  A+S+PF+++ LP +L  F  + DS    +M+ TL  CE   + GE+KFCATSLE++++   GV G   + + +T+   T P  G P   YT
Sbjct:  141 VFFHEEAVRVGRRLPFHFPPATPAALG-FLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTR-DIRPVTS---TLPRAGAPLQTYT 260          
BLAST of DN617992 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 44/104 (42.31%), Postives = 61/104 (58.65%), Query Frame = 1
Query:  349 DPSEQIFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFG 660
            DP+  +FF  ++L+  KS+ ++F+     T    LPR EA+++PFSS +L  +L  F     S  A  +K TL +CEL   KGE K CATSLESM+DF     G
Sbjct:  103 DPTMGLFFLETNLQSSKSIKLHFANMMAGTK--FLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLG 204          
BLAST of DN617992 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  349 DPSEQIFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFG 660
            D    +FF   DL  G  + ++F+      +  LLPR  A+S+PF+S +LP +L   S    S  A+AM+ TL +CE  P  GE K CATSLESM++F     G
Sbjct:   22 DTVNNVFFLEKDLFPGSKMTLHFTRATAGAA--LLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLG 123          
BLAST of DN617992 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 1
Query:  364 IFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFGLETNFKILTTNFITNPLIGNPFANYT 738
            +FF    +++GK LP  F    P+     LPR  A+S+PF+++ LP +L  F  + DS    +M+ TL  CE   + GE+KFCATSLE++++    V G   + + +T+   T P  G P   YT
Sbjct:  168 VFFHEEAVRVGKRLPFRFPPATPAALG-FLPRQVADSVPFTTAALPGVLATFGVASDSATVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTR-DIRPVTS---TLPRAGAPLQTYT 287          
BLAST of DN617992 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  364 IFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGETKFCATSLESMLDFTRGVFG 660
            +FF    +++G+ LP YF     S     LPR  A+SIPF+++ LP +L  F  + D+ +A  M+ TL  CE   L GE+KFCATSLE++++      G
Sbjct:  189 VFFHEEAVRVGERLPFYFPAATTSALG-FLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALG 286          
BLAST of DN617992 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11
Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 1
Query:  349 DPSEQIFFTISDLKIGKSLPIYFSYKDPSTSPHLLPRDEANSIPFSSSELPYLLEFFSFSKDSHQAEAMKYTLTQCELQPLKGET----KFCATSLESMLDFTRGVFG 660
            D    +FF   DL  G  + ++F+      +  LLPR  A S+PF+S  LP +L   S    S  A+AM  TL +CE   L GET     +CATSLESM++F     G
Sbjct:   59 DTVGNVFFLEKDLFPGSKMTLHFTRATAGAA--LLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLG 164          
The following BLAST results are available for this feature:
BLAST of DN617992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
BURPH_ORYSJ1.248e-1544.34BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP3_ORYSJ1.248e-1542.31BURP domain-containing protein 3 OS=Oryza sativa s... [more]
RD22_ARATH4.741e-1540.95Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
RAF1B_WHEAT2.353e-1436.00Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURP5_ORYSJ2.353e-1442.31BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURP6_ORYSJ8.941e-1440.38BURP domain-containing protein 6 OS=Oryza sativa s... [more]
RAF1A_WHEAT4.437e-1336.00Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
BURPD_ORYSJ7.569e-1339.39BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURP1_ORYSJ4.153e-1138.89BURP domain-containing protein 1 OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01P12_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001P12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617992 ID=DN617992; Name=DN617992; organism=Citrus sinensis; type=EST; length=738bp
AAGCAGCAAGCGCTCTCAAGACCAAGCACAGATATGGGTTCTCTTTTATC
TTCCCGGAGCTTCACCCTCTGCGTCCTTCTTGTTTTAATGGTAACATCCG
TTTCCTTTTAAGCTTTCTCATACTTTATTGTTCATAGTACTTTAATTTGT
TTTAATCATGCCAATGATCTGAAAGTTCTGAATTTCCTTTCTTGTTTTAT
AATATATATAATTGCTTTTGCTGTGAAATCTCATGGACAGTTTGCTCAAA
AGAGTACAACCAGGAAGGTAGTAACTAAAGACAATCAGCAAGCTTTAGCT
AATACTGATGGTCATTCGTCATCATCACACATGATGAATAATCATATGGA
CCCTTCAGAGCAAATTTTCTTTACCATTAGTGATCTTAAAATTGGAAAAT
CTTTGCCCATTTATTTCTCTTACAAAGATCCTTCAACTTCACCTCATTTG
TTACCTAGAGATGAAGCCAATTCAATTCCTTTCTCTTCATCTGAATTACC
TTATCTTCTTGAATTCTTCTCCTTCTCAAAAGACTCTCACCAAGCCGAGG
CCATGAAATACACACTTACTCAATGCGAACTTCAACCCCTCAAAGGAGAG
ACCAAGTTTTGTGCTACCTCCTTAGAATCCATGCTTGATTTCACACGCGG
CGTCTTCGGATTGGAAACCAACTTCAAAATTTTAACCACTAATTTCATCA
CAAACCCGTTAATTGGTAATCCTTTTGCAAACTATACC
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