DN617984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCA_ARATH (Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A PE=1 SV=2) HSP 1 Score: 305.834 bits (782), Expect = 1.098e-82 Identity = 146/170 (85.88%), Postives = 154/170 (90.59%), Query Frame = 3 Query: 3 IGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPVTXXXXXXXXXXXXYNHILHKVLR 512 +GSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKW+WLRYFNNDRDRRDLITCGS+SGVCAAFR+PVGGVLF+LEEVATWWRSALLWRTFFSTAVVVVVLRAFIEIC SGKCGLFG+GGLIMFDVS+V VRYH DIIPVT YNH+LHKVLR Sbjct: 188 VGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWRWLRYFNNDRDRRDLITCGSASGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICNSGKCGLFGSGGLIMFDVSHVEVRYHAADIIPVTLIGVFGGILGSLYNHLLHKVLR 357
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCB_ARATH (Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B PE=1 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 4.318e-79 Identity = 141/170 (82.94%), Postives = 149/170 (87.65%), Query Frame = 3 Query: 3 IGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPVTXXXXXXXXXXXXYNHILHKVLR 512 +GSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGG DNHRIKW+WLRYFNNDRDRRDLITCGS++GVCAAFR+PVGGVLF+LEEVATWWRSALLWRTFFSTAVVVVVLR FIEIC SGKCGLFG GGLIMFDVS+V YHV DIIPV YNH+LHKVLR Sbjct: 187 VGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGTDNHRIKWRWLRYFNNDRDRRDLITCGSAAGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLREFIEICNSGKCGLFGKGGLIMFDVSHVTYTYHVTDIIPVMLIGVIGGILGSLYNHLLHKVLR 356
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCC_ARATH (Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.437e-60 Identity = 107/169 (63.31%), Postives = 132/169 (78.11%), Query Frame = 3 Query: 6 GSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPVTXXXXXXXXXXXXYNHILHKVLR 512 GSI VAAG +GKEGP+VH G+CIA+LLGQGG +R+ W+WLR+F NDRDRRDLITCG+++GV AAFRAPVGGVLF+LEE A+WWR+ALLWRTFF+TAVV VVLR+ IE C SG+CGLFG GGLIMFDV++ PV Y D++ + YN+++ KVLR Sbjct: 198 GSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRNALLWRTFFTTAVVAVVLRSLIEFCRSGRCGLFGKGGLIMFDVNSGPVLYSTPDLLAIVFLGVIGGVLGSLYNYLVDKVLR 366
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCG_ARATH (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.035e-56 Identity = 102/170 (60.00%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 3 IGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPVTXXXXXXXXXXXXYNHILHKVLR 512 IG+I AV+A L +GK GP+VH G+C+AS+LGQGG +R+ W+WLR+F NDRDRRDL+TCG+++G+ A+FRAPVGGVLF+LEE+++W SALLWR FFSTAVV +VLRA I++C SGKCGLFG GGLIMFDV + YH+ D++PV YN +L KVLR Sbjct: 172 IGNISAVSASLLIGKAGPMVHTGACVASILGQGGSKRYRLTWRWLRFFKNDRDRRDLVTCGAAAGIAASFRAPVGGVLFALEEMSSW--SALLWRIFFSTAVVAIVLRALIDVCLSGKCGLFGKGGLIMFDVYSENASYHLGDVLPVLLLGVVGGILGSLYNFLLDKVLR 339
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCD_ARATH (Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 7.434e-47 Identity = 86/146 (58.90%), Postives = 112/146 (76.71%), Query Frame = 3 Query: 6 GSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPV 443 GSIG+V GL LGKEGPLVH G+CIASLLGQGG + + +W + F +DRDRRDL+TCG ++GV AAFRAPVGGVLF+LEEV +WWRS L+WR FF++A+V VV+R + C SG CG FG GG I++DVS+ Y+ +++P+ Sbjct: 178 GSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWPQLFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGICGHFGGGGFIIWDVSDGQDDYYFKELLPM 323
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCN7_BOVIN (H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.668e-22 Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 6 GSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPV 443 G I +V GL +GKEGP++H GS IA+ + QG + + ++ YF D ++RD ++ G+++GV AAF APVGGVLFSLEE A++W L WR FF++ + L F+ G + GLI F + +V+ IP+ Sbjct: 237 GVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLN-FVLSIYHGNAWDLSSPGLINFGRFDTETMVYVIHEIPI 381
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCN7_RAT (H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 6 GSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPV 443 G I +V GL +GKEGP++H GS IA+ + QG + + ++ YF D ++RD ++ G+++GV AAF APVGGVLFSLEE A++W L WR FF++ + L F+ G + GLI F + + + IPV Sbjct: 231 GVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLN-FVLSIYHGNMWDLSSPGLINFGRFDSEKMAYTIHEIPV 375
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCN7_MOUSE (H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 6 GSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPV 443 G I +V GL +GKEGP++H GS IA+ + QG + + ++ YF D ++RD ++ G+++GV AAF APVGGVLFSLEE A++W L WR FF++ + L F+ G + GLI F + + + IPV Sbjct: 231 GVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLN-FVLSIYHGNMWDLSSPGLINFGRFDSEKMAYTIHEIPV 375
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCN7_HUMAN (H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 6 GSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPV 443 G I +V GL +GKEGP++H GS IA+ + QG + + ++ YF D ++RD ++ G+++GV AAF APVGGVLFSLEE A++W L WR FF++ + L F+ G + GLI F + + + IPV Sbjct: 233 GVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLN-FVLSIYHGNMWDLSSPGLINFGRFDSEKMAYTIHEIPV 377
BLAST of DN617984 vs. ExPASy Swiss-Prot
Match: CLCD_DICDI (Chloride channel protein D OS=Dictyostelium discoideum GN=clcD PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 3 Query: 18 AVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVL 323 AV++GL G EGP++HIG+ + + Q K +LR F ND+D+RD +T G+ +GV AAF AP+GG LFSLEEV+++W AL WR FF V + Sbjct: 361 AVSSGLQAGSEGPMIHIGAIVGNGFSQAQSKEFGFKIPFLRSFRNDKDKRDFVTSGAGAGVAAAFSAPLGGTLFSLEEVSSFWSIALTWRAFFCCMVATYTM 462 The following BLAST results are available for this feature:
BLAST of DN617984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617984 ID=DN617984; Name=DN617984; organism=Citrus sinensis; type=EST; length=619bpback to top |