CX045937

Overview
NameCX045937
Unique NameCX045937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length429
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.202e-13
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = -2
Query:  297 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 428
            EESYK S+LIMQLLRDNLTLWTSD  ++ GDEIKEAA+KRESGE
Sbjct:  216 EESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAAAKRESGE 259          
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.427e-12
Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = -2
Query:  288 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQQ 428
            EESYK S+LIMQLLRDNLTLWTSD  DD GD+IKE ASK ESGE QQ
Sbjct:  215 EESYKDSTLIMQLLRDNLTLWTSDNADDVGDDIKE-ASKPESGEGQQ 260          
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.427e-12
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = -2
Query:  297 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 428
            EESYK S+LIMQLLRDNLTLWTSD  DD GDEIKEAA+ +E G+
Sbjct:  221 EESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIKEAAAPKEPGD 264          
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.864e-12
Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = -2
Query:  288 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQQ 428
            EESYK S+LIMQLLRDNLTLWTSD TDDA DEI+E  SK+ESG+ QQ
Sbjct:  214 EESYKDSTLIMQLLRDNLTLWTSDTTDDAEDEIRE-GSKQESGDGQQ 259          
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 7.083e-12
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = -2
Query:  291 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 428
            EESYK S+LIMQLLRDNLTLWTSD+ DDA DEIKEAA+ + + E Q
Sbjct:  214 EESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIKEAAAPKPTEEQQ 259          
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.251e-12
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = -2
Query:  297 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 428
            EESYK S+LIMQLLRDNLTLWTSDITD AGDEIKE  SK++ GE
Sbjct:  215 EESYKDSTLIMQLLRDNLTLWTSDITDIAGDEIKE-TSKQQPGE 257          
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.578e-11
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = -2
Query:  312 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASK 428
            EESYK S+LIMQLLRDNLTLWTSD+ DD GDEIKEAA K
Sbjct:  217 EESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEIKEAAPK 255          
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.578e-11
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = -2
Query:  297 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 428
            EESYK S+LIMQLLRDNLTLWTSD+TD+AGDEIKE ASK +  E
Sbjct:  213 EESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIKE-ASKPDGAE 255          
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.692e-11
Identity = 33/44 (75.00%), Postives = 37/44 (84.09%), Query Frame = -2
Query:  297 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 428
            EESYK S+LIMQLLRDNLTLWTSD+ DD  DEIKEAA K ++ E
Sbjct:  215 EESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKEAAPKPDNNE 258          
BLAST of CX045937 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.515e-11
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = -2
Query:  306 EESYKVSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 428
            EESYK S+LIMQLLRDNLTLWTSD  ++ GDEIKEAASK E
Sbjct:  217 EESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAASKPE 257          
The following BLAST results are available for this feature:
BLAST of CX045937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
1433_MESCR2.202e-1381.8214-3-3-like protein OS=Mesembryanthemum crystallin... [more]
14334_SOLLC1.427e-1280.8514-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
14334_ORYSJ1.427e-1277.2714-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
14331_SOLTU1.864e-1278.7214-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
14332_ARATH7.083e-1273.9114-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
1433A_SOYBN9.251e-1281.8214-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
1433_OENEH1.578e-1184.6214-3-3-like protein OS=Oenothera elata subsp. hook... [more]
14333_ARATH1.578e-1179.5514-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14335_SOLTU2.692e-1175.0014-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
1433A_HORVU3.515e-1180.4914-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_4H04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-4H04-O8-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045937 ID=CX045937; Name=CX045937; organism=Citrus sinensis; type=EST; length=429bp
GTGAAATCTTAAAATTAAATATAACAAAAATGGGTAATTTCAATTCTAAA
GTTTAGCATAGCACTGAAAACACTACATATGAAACCCAAACCAAATACTT
CTCATCAATAATTAAATCTAGTTTACAATCTGTTGGAACACATAAACCCT
AAGTGCAGCCAACACTCAAGATTATCAGTTCATGAGAATATCCTGCTAAA
ACAACCCACATGGCATCCATGTAAAATAAAAGCCACAAGATAAAAAATAC
AGATACATATCCTATGAACTGAACTCATTATTCATCACTGCTGCGTCTCC
CCTGATTCACGTTTTGATGCTGCTTCCTTAATCTCATCTCCAGCATCATC
AGTGATATCAGAAGTCCAAAGTGTCAGATTATCTCGGAGAAGCTGCATAA
TCAATGAACTGACCTTGTATGATTCTTCA
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