CX045934

Overview
NameCX045934
Unique NameCX045934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX045934 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18
Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = -2
Query:  399 EEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFN------DGGYNVANCMRAVAEPLLVSQFGESIIDELFKRYREIVADRMFKEKTKFINVTVSLTKIG 755
            EEE ++ FN P Y  SP E+K  + KEGSF+ID LE+S V+W   + G   +++ D           G  VA  +RAV EP+L   FG+ ++DELF+RY ++V + ++    ++  V VSL ++G
Sbjct:  271 EEENIDAFNAPYYAASPEELKMAIEKEGSFSIDRLEISPVDW---EGGSISDDSYDIVRFKPEALASGRRVAKTIRAVVEPMLEPTFGQKVMDELFERYAKLVGEYVYVSSPRYTIVIVSLLRMG 392          
BLAST of CX045934 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = -2
Query:  399 EEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDG-------GYNVANCMRAVAEPLLVSQFGESIIDELFKRYREIVADRMFKEKTKFINVTVSLTKIG 755
            EEEK++ FN P Y  S  E+K  + KEGSF+ID LE+S ++W   + G    E+ D            G  V+N +RAV EP+L   FGE+++DELF+RY +IV +  +    ++  V +SL + G
Sbjct:  267 EEEKIDAFNAPYYAASSEELKMVIEKEGSFSIDRLEISPIDW---EGGSISEESYDLVIRSKPEALASGRRVSNTIRAVVEPMLEPTFGENVMDELFERYAKIVGEYFYVSSPRYAIVILSLVRAG 389          
BLAST of CX045934 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.209e-15
Identity = 40/113 (35.40%), Postives = 70/113 (61.95%), Query Frame = -2
Query:  405 FNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQ---NGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGESIIDELFKRYREIVADRMFKEKTKFINVTVSLTK 734
            FNIP Y+P   E+++ ++ EGSFT+D LEV  V W+A     +  + + ++      G  VA+C+RA+ EP+L S FG +I+D LF +Y + + + +  E + + ++ VSL++
Sbjct:  251 FNIPIYSPCTREVEAAILSEGSFTLDRLEVFRVCWDASDYTDDDDQQDPSIFGKQRSGKFVADCVRAITEPMLASHFGSTIMDLLFGKYAKKIVEHLSVENSSYFSIVVSLSR 363          
The following BLAST results are available for this feature:
BLAST of CX045934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
JMT_BRARP3.641e-1838.40Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
JMT_ARATH8.110e-1838.89Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
BAMT_ANTMA2.209e-1535.40Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_4H03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-4H03-O6-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045934 ID=CX045934; Name=CX045934; organism=Citrus sinensis; type=EST; length=756bp
TTTTTTTTTTTTTTTTTAATTCAAATAACAGTACATAGCTTTTATTTTGG
TACACACAAACCAAAGGGCCACATACTAATTCTTTCATTCAAAAAAAATA
CAGTATTAATGCCAACACTTGTTGATACCAAAATTTACTGACATATTCAA
ACCAACGAGTGATAAAATTAACTATGATAATTAAACATTCTAAATATTAT
CCTGAAATGTGCACCTCAAATGAGTGATGTAACATTTATTAAGTGGACGG
TGATGTTGAACATTTTTTAATACCCCATTTTCCCATCCACAATATTGAAG
CACATCAATGAGGACGCATCTTCTTGGGATAAATTATTGGAAAGGCTAAC
ATGCCTCTCAAGTTTTATTTCTTAATAATTGTCTTATCTTAGTGATCATC
CAATTTTCGTCAAGGAAACTGTCACGTTGATAAACTTAGTCTTTTCCTTA
AACATGCGATCGGCAACAATTTCCCTGTACCTTTTAAACAGCTCATCAAT
GATTGATTCACCAAACTGACTAACAAGCAAGGGCTCGGCCACAGCTCTCA
TGCAATTCGCAACGTTGTATCCTCCATCATTAAATGCATCAACGGCCTCG
TTAAACTTAAAACCATTCTGATAAGCGTTCCAGTTAACTTCAGAAACCTC
AAGGTGATCAATGGTGAAGGATCCTTCCTTTATAACCTCCGATTTTATTT
CAGCTGGTGATGGTGTATACTGCGGAATGTTGAAACAATTCACTTTCTCT
TCTTCT
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