CX045931

Overview
NameCX045931
Unique NameCX045931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX045931 vs. ExPASy Swiss-Prot
Match: Y5848_ARATH (Uncharacterized protein At5g48480 OS=Arabidopsis thaliana GN=At5g48480 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 51/128 (39.84%), Postives = 69/128 (53.91%), Query Frame = -3 
Query:  413 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG--DSAAAQTVGTGCVLCLETEDXXXXXXXXXXXXXXXXXXXXXXXXACCGERVGKVKDPYGFTWL 790
            K  LLVEA K  DAV FYK+AFGA+E G S+  KRK +QELP +  ++L +AGS+F+V DVS     + A++ G+G    L T+D                           G + GKV DP+G TW+
Sbjct:   27 KQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE--LGFK-GKVTDPFGVTWI 151
The following BLAST results are available for this feature:
BLAST of CX045931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5848_ARATH1.179e-1439.84Uncharacterized protein At5g48480 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_4H01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-4H01-O2-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045931 ID=CX045931; Name=CX045931; organism=Citrus sinensis; type=EST; length=792bp
GTTATTGTCCCACGAGGCACAACAATAAACCAACACCCTATCCACATCCA
CAACCACGACGTTTAAAAGTCTATCTTACCCTCCACAAAGAAGGGATAGT
TATCACTAGAATTAATGATGATATTACTAGCAAAATAGAAGATGATAAAT
TGATAATAAGAGTAGCAAGAAGTCTATAACTGCCAGCTGTCAGTTCCTTC
AAAATTAATCAAAAACATCCTTCATCATGATCAACGTTCAGCAATATCAT
CAAGATATCCGAAATACTAAAAAAGCCTAGAGCTATAAACCCACAGCAGA
AAAGACGAACGACAAAAGAGAGTTATGTGATAGTAGATCAATATCTAAAG
ATCATCAGATCAGGCGGCTCTTAAGCTTCCACGCCAGCGCACTTCTTGAC
CGGGGAGCAAATGAGCCAAGTGAAGCCATAAGGATCTTTGACCTTTCCCA
CGCGCTCTCCACAACACGCGCCGTTGCCTTCAGCGAGCTCACCCTCAGCA
ACAGCTCCAGCACTCACAGCCTTGGCGACGGCAGCCTCCACGTCCTCGGT
CTCCAAGCAAAGCACGCATCCGGTCCCCACGGTCTGTGCAGCAGCAGAGT
CACCGGAAACGTCAGAGACAAGGAAGGTGGAGCCGGCAATCTCCAGTTGA
GCGCAGGAGATGAGTGGGAGCTCCTGTTCAGCCTTGCGTTTGGTTTCCAC
GCTACGGCCGATCTCCACAGCACCAAACGCGGTCTTGTAGAACTGAACAG
CGTCAGTAGCCTTCGGTGCTTCCACAAGCAACTGCGGCTTCA
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