EY667088

Overview
NameEY667088
Unique NameEY667088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY667088 vs. ExPASy Swiss-Prot
Match: MTPC3_ARATH (Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 6.500e-54
Identity = 106/175 (60.57%), Postives = 129/175 (73.71%), Query Frame = 2 
Query:   26 SIMXXXXXXXXXXXXYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNH-HKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHA 547
            SIM            YC++  N IV+AYA+DH FDV+TN++GLVA +LAN    W+DP GAI+LA+YTI  WS TV+EN  SL+G+SA PE LQKLTYL       +I+H+DTVRAYTFG  YFVEVDI LP  +PL+EAH IGESLQ KLE LPE+ERAFVHLD+E  H+PEH+
Sbjct:  228 SIMLSATAIKLVLWIYCKSSRNHIVRAYAKDHHFDVVTNVLGLVAAVLANAFYWWLDPTGAILLAIYTIVNWSGTVMENAVSLIGQSAPPEVLQKLTYLVMRQGGDNIKHVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHAIGESLQIKLEELPEVERAFVHLDFECHHKPEHS 402
[Close]
BLAST of EY667088 vs. ExPASy Swiss-Prot
Match: Y449_METJA (Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii GN=MJ0449 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 39/147 (26.53%), Postives = 80/147 (54.42%), Query Frame = 2 
Query:   77 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 517
            +   ++++ A A  H  D +++++ LV +LL  +   + D +  II+AL   +      L N++ L GR+   ++ + +     N  K I  +  ++A+  G    VE+ + +P+++  +E HDI  +++ +LE L  +ERA+VH+D
Sbjct:  135 KKLNSQVLIADAYHHRSDALSSVVVLVGLLLQKFGIYYGDAIAGIIVALMIAKVAFDICLTNIDYLTGRAPPKKFFELIEKEALNVDKVIG-VHDIKAHYVGPRIHVELHVEVPSNISAKEMHDIEVAVKNRLESLENVERAYVHVD 280
The following BLAST results are available for this feature:
BLAST of EY667088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MTPC3_ARATH6.500e-5460.57Putative metal tolerance protein C3 OS=Arabidopsis... [more]
Y449_METJA3.989e-1126.53Uncharacterized transporter MJ0449 OS=Methanocaldo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-028-A04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY667088 ID=EY667088; Name=EY667088; organism=Citrus sinensis; type=EST; length=851bp
AAAAGAACAGAGCAATGCCCCTTTGAGCATCATGCTTTCGGTGACCCTAG
TAAAACTTCTTCTGGTTGTGTATTGCCGTGCCTTTACTAATGAGATTGTC
AAAGCTTATGCCCAGGATCACTTTTTTGATGTTATCACCAACATCATTGG
CCTCGTAGCTGTACTTCTTGCTAATTACATTGATGACTGGATGGATCCCG
TTGGAGCTATTATTCTGGCCTTGTACACCATCCGCACATGGTCAATGACA
GTGTTGGAAAATGTGAACTCCCTTGTTGGAAGATCAGCTGCTCCAGAGTA
TCTACAAAAGCTCACATACCTCTGCTGGAACCACCACAAGTCCATAAGAC
ATATTGACACAGTCCGAGCTTACACATTTGGGTCTCACTACTTTGTGGAG
GTTGACATTGTGCTGCCAGCAAGCATGCCCTTGCAAGAGGCCCATGACAT
CGGTGAGTCCTTGCAGGAGAAGCTCGAGCTTCTGCCAGAGATTGAGCGCG
CCTTTGTTCATCTTGATTACGAGTACACTCACAGACCTGAGCATGCTCCA
AGCACACTACTAAGAACTGTAGAATATTCTGATGTTGTATTTATTATCAT
CTTGTTGGTGCTTTTTGTTCCCACCCTACAAGTCCAATTATTAATTATCC
CCGAAAAATCAGCCTTGGGGAAAAAAAAATTTGCATTGACAAAATTATTT
ACCACTAATTTTTAGAATTTAAAATTCAATTACCCAATAACCAAAAAATT
CCTGGGGGAGGGTAAAAACAACCTAAAAATGGTACTTTGGGGTTTTGTTT
GAGGCGCATGGAAGAAAATAAAAAGAGTGCTTGTCTAATCTCCGCCCCCG
T
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