DN617795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_SOLLC (Histidine decarboxylase OS=Solanum lycopersicum GN=HDC PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.507e-41 Identity = 79/148 (53.38%), Postives = 105/148 (70.95%), Query Frame = -3 Query: 141 SNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIDNRS-TWYEDGKRQPPCIAADIGSENCVCAAHK 581 S +EY+ S DATI GSRNG PIFLWY L++KG+ Q++ C+ NA YLKDRLL+AGIS MLN+ S TVVFERP D +F+RRW L C +AHVV+MP +T + +D F +L+ R+ WY+D K PPC+A D+ + NC+C+ K Sbjct: 264 SKIEYINSADATISGSRNGFTPIFLWYCLSKKGHARLQQDSITCIENARYLKDRLLEAGISVMLNDFSITVVFERPCDHKFIRRWNLCCLRGMAHVVIMPGITRETIDSFFKDLMQERNYKWYQDVKALPPCLADDL-ALNCMCSNKK 410
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_VIBAN (Histidine decarboxylase OS=Vibrio anguillarum GN=hdc PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.792e-18 Identity = 47/121 (38.84%), Postives = 75/121 (61.98%), Query Frame = -3 Query: 237 INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNVT-IDKLDDFLNELI 596 ++ +S V+Y++SRD TI GSRNGH+ +F+W + + +Q +V +CL A Y R + GI+A N+ S+TVVF P E R+ LA G++AH++ MP++ DKLD + ++I Sbjct: 251 VDQISVEVDYISSRDQTISGSRNGHSALFMWTAIKSHSFVDWQGKVNQCLNMAEYTVQRFQEVGINAWRNKNSNTVVFPCP-SEPVWRKHSLANSGSVAHIITMPHLDGPDKLDPLIEDVI 370
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_VIBHB (Histidine decarboxylase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hdc PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.057e-18 Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = -3 Query: 216 INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNV-TIDKLDDFLNELIDNRSTWY 596 ++ +S V+Y++SRD TI GSRNGH+ +F+W + +Q +V+ CL A Y RL AGI A N+ S+TVVF P E R+ LA G++AH+V MP++ + +LD ++++I + S Y Sbjct: 251 VDQISVEVDYISSRDQTISGSRNGHSALFMWTAIKSHSLSDWQSKVKLCLDMADYTVQRLQKAGIEAWRNKNSNTVVFPCP-SEPIWRKHSLATSGDVAHIVTMPHLNSTAQLDALIDDVIFDLSPEY 377
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_RHILO (Histidine decarboxylase OS=Rhizobium loti GN=hdc PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.087e-15 Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = -3 Query: 225 NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIDNRS 578 N++Y+ S D T+ GSRN PI LWY + G +G ++ Q+C R A Y D L G+SA N + TVV P ++ +WQ+A Q +++H+VV P T + D + E I NR+ Sbjct: 254 NIDYIGSSDTTLSGSRNAFTPIILWYAIRSLGIEGIKQTFQQCERLAAYTADELNVRGVSAWRNPNALTVVLP-PVEDSIKTKWQIATQ-DVSHLVVTPGTTKQQADALI-ETISNRN 368
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_MORMO (Histidine decarboxylase OS=Morganella morganii GN=hdc PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.569e-14 Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = -3 Query: 255 INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVV----MPNVTIDKLDD 596 ++ +S ++Y+++ D TI GSRNGH P+ LW + + +++ + + L A Y DR+ AGI+A N+ S TVVF P E R LA G++AH++ + V IDKL D Sbjct: 251 VDRISVEIDYISAHDKTITGSRNGHTPLMLWEAIRSHSTEEWKRRITRSLDMAQYAVDRMQKAGINAWRNKNSITVVFPCP-SERVWREHCLATSGDVAHLITTAHHLDTVQIDKLID 367
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_KLEPL (Histidine decarboxylase OS=Klebsiella planticola GN=hdc PE=3 SV=4) HSP 1 Score: 77.411 bits (189), Expect = 5.967e-14 Identity = 39/121 (32.23%), Postives = 71/121 (58.68%), Query Frame = -3 Query: 237 INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMP-NVTIDKLDDFLNELI 596 ++ +S ++Y+++ D TI GSRNGH P+ +W + ++ +++ +++ L A Y DR AGI A N+ S TVVF P E ++ LA G+IAH++ ++ K+D ++++I Sbjct: 251 VDRISVEIDYISAHDKTISGSRNGHTPLMMWEAIRSHSWEEWRRRIERSLNMAQYAVDRFQSAGIDAWRNKNSITVVFPCP-SEAVWKKHCLATSGDIAHLIATAHHLDSSKIDALIDDVI 370
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_PSEFL (Histidine decarboxylase OS=Pseudomonas fluorescens GN=hdc PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = -3 Query: 279 LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPN 587 +S V+Y+ + D TI GSRNGH P+ +W L + ++ ++ L A Y DR +GI A NE S TVVF P E ++ LA GN AH++ P+ Sbjct: 255 ISVEVDYIRAHDKTISGSRNGHTPLMMWAALRSYSWAEWRHRIKHSLDTAQYAVDRFQASGIDAWRNENSITVVFPCP-SERIATKYCLATSGNSAHLITTPH 356
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_PSEE4 (Histidine decarboxylase OS=Pseudomonas entomophila (strain L48) GN=hdc PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = -3 Query: 237 LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNVTIDK--LDDFLNELI 587 +S +V+Y+ + D TI GSRNGH P+ +W L +++ V+ L +A Y DRL AGI A ++ S TVVF P R++ LA G+ AH++ P+ DK +D ++E+I Sbjct: 254 ISVDVDYIRANDKTISGSRNGHTPMMMWAALRSHSPAQWRRRVRHSLNSAQYAVDRLQAAGIDAWRHDNSITVVFPCP-SSRIARKYCLATSGDTAHLITTPHHQ-DKSMIDALIDEVI 370
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_ACIBY (Histidine decarboxylase OS=Acinetobacter baumannii (strain AYE) GN=hdc PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = -3 Query: 291 LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVV 587 +S +V+Y+++RD TI GSRNGH + +W + + ++ +Q CL+ A Y DR GI A N S TVVF P E ++ LA GN+AH++ Sbjct: 254 ISVDVDYISTRDQTISGSRNGHTVLLMWAAIRSQTNLQRRQRIQHCLKMAQYAVDRFQAVGIPAWRNPNSITVVFPCP-SEHIWKKHYLATSGNMAHLI 351
BLAST of DN617795 vs. ExPASy Swiss-Prot
Match: DCHS_ACIBC (Histidine decarboxylase OS=Acinetobacter baumannii (strain ACICU) GN=hdc PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = -3 Query: 291 LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVV 587 +S +V+Y+++RD TI GSRNGH + +W + + ++ +Q CL+ A Y DR GI A N S TVVF P E ++ LA GN+AH++ Sbjct: 254 ISVDVDYISTRDQTISGSRNGHTVLLMWAAIRSQTNLQRRQRIQHCLKMAQYAVDRFQAVGIPAWRNPNSITVVFPCP-SEHIWKKHYLATSGNMAHLI 351 The following BLAST results are available for this feature:
BLAST of DN617795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617795 ID=DN617795; Name=DN617795; organism=Citrus sinensis; type=EST; length=598bpback to top |