DN617627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617627 vs. ExPASy Swiss-Prot
Match: NDUAC_ARATH (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana GN=At3g03100 PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 2.834e-54 Identity = 94/119 (78.99%), Postives = 104/119 (87.39%), Query Frame = -2 Query: 192 QTKLHNRGATLVGVDKFGNKYYQKL-DEQFGRHRWVEYAEKSRYNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHKENLSGEGEEFIYHSKGHFLNPEQRDWSRYQPWEPSKKE 545 QTK+HN GATLVGVDKFGNKYYQKL D Q+GRHRWVEYA K RYNASQVP EWHGWLH +TDHTGDELL LKPKRYGLEHKEN SGEG+ +IYHSKGH LNP Q++W+RYQ W P+K + Sbjct: 41 QTKIHNIGATLVGVDKFGNKYYQKLGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKENFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKTQ 159
BLAST of DN617627 vs. ExPASy Swiss-Prot
Match: NDUAC_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Bos taurus GN=NDUFA12 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.520e-15 Identity = 42/95 (44.21%), Postives = 52/95 (54.74%), Query Frame = -2 Query: 264 RGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHKENLSGEGEEFIYHS 527 R TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLHCMTD K HK NLSG ++++ +S Sbjct: 34 RVGTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGKNTFWDVDGSMVPPEWHRWLHCMTDDPPTVKPPTARKFIWTNHKFNLSGTPQQYVPYS 128
BLAST of DN617627 vs. ExPASy Swiss-Prot
Match: NDUAC_MOUSE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Mus musculus GN=Ndufa12 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 9.853e-15 Identity = 41/95 (43.16%), Postives = 51/95 (53.68%), Query Frame = -2 Query: 264 RGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHKENLSGEGEEFIYHS 527 R TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLHCMTD K HK N+S E+++ +S Sbjct: 34 RIGTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGKNTFWDVDGSMVPPEWHRWLHCMTDDPPTTNPPTARKFIWTNHKFNVSATPEQYVPYS 128
BLAST of DN617627 vs. ExPASy Swiss-Prot
Match: NDUAC_CAEEL (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Caenorhabditis elegans GN=Y94H6A.8 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 9.853e-15 Identity = 49/119 (41.18%), Postives = 65/119 (54.62%), Query Frame = -2 Query: 186 RGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKS--RYNASQVPPEWHGWLHCMTDHTGDELLMLKP---KRYGLEHKENLSGEGEEFIYHSKGHFLNPEQRDWSRYQPWEPSKKE*F 527 R TLVG D FGN+YY+ R+RWVE+ +K Y+A+QVPPEWH WLH H D+ +KP + + LEHKEN S IY K + P ++ Q W+P +K F Sbjct: 39 RVGTLVGSDNFGNRYYENNAYFVPRNRWVEFPDKVWLDYDATQVPPEWHSWLH----HITDDAPSVKPPPTQDWVLEHKENTS------IYADKKYV--PYSTTRTKIQGWQPGEKPQF 145
BLAST of DN617627 vs. ExPASy Swiss-Prot
Match: NDUAC_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Gorilla gorilla gorilla GN=NDUFA12 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.287e-14 Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = -2 Query: 264 TLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHKENLSGEGEEFIYHS 518 TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLH MTD + K HK N++G E+++ +S Sbjct: 37 TLVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIWTNHKFNMTGTPEQYVPYS 128
BLAST of DN617627 vs. ExPASy Swiss-Prot
Match: NDUAC_PANTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pan troglodytes GN=NDUFA12 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = -2 Query: 264 TLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHKENLSGEGEEFIYHS 518 TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLH MTD + K HK N++G E+++ +S Sbjct: 37 TLVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128
BLAST of DN617627 vs. ExPASy Swiss-Prot
Match: NDUAC_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Homo sapiens GN=NDUFA12 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = -2 Query: 264 TLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHKENLSGEGEEFIYHS 518 TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLH MTD + K HK N++G E+++ +S Sbjct: 37 TLVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128
BLAST of DN617627 vs. ExPASy Swiss-Prot
Match: NDUAC_PONPY (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus GN=NDUFA12 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.890e-14 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = -2 Query: 264 TLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHKENLSGEGEEFIYHS 518 TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLH +TD + K HK N++G E+++ +S Sbjct: 37 TLVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHHWLHSITDDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128
BLAST of DN617627 vs. ExPASy Swiss-Prot
Match: NDUAC_DICDI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum GN=ndufa12 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 8.341e-14 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = -2 Query: 291 TLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSRYNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHKENLSG 518 TLVGVDK GN+YY+ E +GRHRWVEY + + + +PPE+H W+H ++D E+L P Y H N +G Sbjct: 33 TLVGVDKVGNRYYENRQEIYGRHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPSEMLPFSP-TYKRPHIANPTG 107 The following BLAST results are available for this feature:
BLAST of DN617627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617627 ID=DN617627; Name=DN617627; organism=Citrus sinensis; type=EST; length=546bpback to top |