CX045375

Overview
NameCX045375
Unique NameCX045375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX045375 vs. ExPASy Swiss-Prot
Match: EIN3_ARATH (Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.523e-77
Identity = 138/173 (79.77%), Postives = 156/173 (90.17%), Query Frame = 2
Query:  284 MSFDEMGFCGDMNFFSA-PLGDADMAVQP-SEPEATVEDDYTDEEMDVDELERRMWKDKMRIKRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKNEGINAIGP 796
            M F+EMG CG+M+FFS+  LG+ D    P +EP++ VEDDYTD+E+DVDELERRMW+DKMR+KRLKEQ +GKEG+D AKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE GKPVTGASDNLREWWKDKVRFDRNGPAAITKYQA+N++PG +EG N IGP
Sbjct:    1 MMFNEMGMCGNMDFFSSGSLGEVDFCPVPQAEPDSIVEDDYTDDEIDVDELERRMWRDKMRLKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGP 173          
BLAST of CX045375 vs. ExPASy Swiss-Prot
Match: EIL1_ARATH (ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana GN=EIL1 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.120e-67
Identity = 128/175 (73.14%), Postives = 148/175 (84.57%), Query Frame = 2
Query:  281 MMSFDEMGFCGDMNFFSAPLGDADMAVQPSEPEATVED-DYTDEEMDVDELERRMWKDKMRIKRLKEQ-SRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKNEGINA-IGP 796
            MM F+EMG  G+M+FFS+        +  +E E  VED DYTD+EMDVDELE+RMW+DKMR+KRLKEQ S+ KEG+D +KQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAI KYQ++N++ G +   N+ +GP
Sbjct:    1 MMMFNEMGMYGNMDFFSSSTSLDVCPLPQAEQEPVVEDVDYTDDEMDVDELEKRMWRDKMRLKRLKEQQSKCKEGVDGSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQSENNISGGSNDCNSLVGP 175          
BLAST of CX045375 vs. ExPASy Swiss-Prot
Match: EIL3_ARATH (ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.584e-45
Identity = 90/158 (56.96%), Postives = 119/158 (75.32%), Query Frame = 2
Query:  338 LGDADMAV----QPSEPEATVED-----DYTDEEMDVDELERRMWKDKMRIKRLKE-QSRGKEGIDMAKQ-RQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKNEG 778
            +GD  M+V      +EP+    D     D +DEE+D D+LERRMWKD++R+KR+KE Q  G +G    +  ++  +QA+RKKMSRAQDGILKYMLK+MEVCK +GFVYGIIPEKGKPV+G+SDN+R WWK+KV+FD+NGPAAI KY+ +    GK++G
Sbjct:    1 MGDLAMSVADIRMENEPDDLASDNVAEIDVSDEEIDADDLERRMWKDRVRLKRIKERQKAGSQGAQTKETPKKISDQAQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEEECLAFGKSDG 158          
BLAST of CX045375 vs. ExPASy Swiss-Prot
Match: EIL2_ARATH (ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidopsis thaliana GN=EIL2 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.277e-36
Identity = 74/141 (52.48%), Postives = 102/141 (72.34%), Query Frame = 2
Query:  380 ATVEDDYTDEEMDVDELERRMWKDKMRIKRLKEQSRGKEGIDMAKQRQSQ---EQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKNEGINAIG 793
            A  +D  +DEEM+++ELE+++W+DK R+KRLKE ++   G  +  ++Q     E + ++ M +AQDGILKYM K ME  KAQGFVYGI+ E GK V G+SDNLREWWKDKVRFDRNGPAAI K+Q D ++   ++  + +G
Sbjct:   34 ALCDDLSSDEEMEIEELEKKIWRDKQRLKRLKEMAKNGLGTRLLLKQQHDDFPEHSSKRTMYKAQDGILKYMSKTMERYKAQGFVYGIVLENGKTVAGSSDNLREWWKDKVRFDRNGPAAIIKHQRDINLSDGSDSGSEVG 174          
BLAST of CX045375 vs. ExPASy Swiss-Prot
Match: EIL4_ARATH (Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=Arabidopsis thaliana GN=EIL4 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.376e-34
Identity = 70/131 (53.44%), Postives = 100/131 (76.34%), Query Frame = 2
Query:  359 VQPSEPEATVEDDYTDEEMDVDELERRMWKDK-MRIKRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQA 748
            V+  EP + ++D+  +EE+  D+L+RRMWKD+ +  K+LK+Q R    + ++      E +RRKKM+R+QD +LKYM+K+MEVCKA+GFVYGI+PEKGKP+TG+SD+LR WWK+ V+FD+N P AIT Y A
Sbjct:    4 VEELEPLSPMDDE--EEEISYDDLKRRMWKDRNLMEKKLKQQKRHSNDV-VSFTTHRAEASRRKKMARSQDSVLKYMMKIMEVCKAKGFVYGIVPEKGKPITGSSDSLRRWWKENVQFDQNAPDAITDYLA 131          
BLAST of CX045375 vs. ExPASy Swiss-Prot
Match: EIL5_ARATH (ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidopsis thaliana GN=EIL5 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.172e-31
Identity = 73/156 (46.79%), Postives = 96/156 (61.54%), Query Frame = 2
Query:  359 VQPSEPEATVED-DYTDEEMDVDELER------------RMWKDKMRIKRLKEQSRGKEGIDMAKQRQSQ---------------EQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKY 742
            VQ  EP + ++D D  D E DVDE ER            RMWKD+  + +LK+Q R      ++    S                E +RRKKM+R+QD +LKYM+K+MEVCKAQGFVYGI+PEKGKPVTG+SD+LR WWK+ V+FD+  P A++ Y
Sbjct:    4 VQDLEPLSPIQDYDEDDLEEDVDEFERFGEEISYDDLKKRMWKDRNLMCKLKQQKRDNLNSVISSPSSSTSASSSSSSSVIVRRTEASRRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTGSSDSLRRWWKENVQFDQTAPNAVSDY 159          
The following BLAST results are available for this feature:
BLAST of CX045375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
EIN3_ARATH6.523e-7779.77Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thal... [more]
EIL1_ARATH6.120e-6773.14ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidops... [more]
EIL3_ARATH6.584e-4556.96ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidops... [more]
EIL2_ARATH4.277e-3652.48ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidops... [more]
EIL4_ARATH1.376e-3453.44Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=... [more]
EIL5_ARATH3.172e-3146.79ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidops... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_22E02_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-22E02-J4-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045375 ID=CX045375; Name=CX045375; organism=Citrus sinensis; type=EST; length=804bp
GATCAATCTTCTCTTCTTTCTGTGCTTACTTTCTTCTCGGGAAAGTTGAA
CTTAACTTTACCAATTTTCCCGGGAAATTTGTGAGGATTCCACCTGTTAT
ATATGGTAAAAAGGGTTGCGATACTCGGGCAACTTTGAAGTTTTAATACA
GTTGTTGCTCATAGATAGTCAAGGGAAGGAGGTGGTTTTATTGCTTGAAG
TTTTTTTGGTTATAGTCCTATTAGATTAGCGAGAGACTTGCAAATTTGGA
GTTTCTGTGGGTGTTAACGCTGTGGGAATGATGATGAGTTTTGATGAGAT
GGGGTTTTGTGGTGACATGAACTTCTTCTCTGCTCCTCTGGGAGATGCAG
ATATGGCCGTCCAACCATCTGAACCGGAGGCTACCGTGGAGGATGATTAT
ACTGATGAAGAGATGGATGTTGATGAGCTTGAGAGGAGGATGTGGAAGGA
CAAAATGCGTATCAAACGGCTGAAAGAACAAAGCAGGGGCAAGGAGGGAA
TTGACATGGCCAAGCAGCGTCAGTCGCAAGAGCAGGCAAGGAGGAAGAAG
ATGTCGAGGGCTCAAGATGGGATCTTGAAATACATGTTAAAAATGATGGA
AGTTTGTAAAGCTCAAGGTTTTGTCTATGGGATTATTCCAGAGAAAGGAA
AGCCTGTGACTGGGGCATCTGACAATCTCCGTGAGTGGTGGAAGGATAAG
GTTAGGTTTGATCGTAATGGTCCGGCTGCTATAACTAAGTACCAAGCTGA
TAATTCAGTCCCTGGCAAGAATGAGGGCATTAACGCAATTGGTCCACCCC
GCAT
back to top