EY662345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.371e-34 Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 11 NGEIQEPFGGIMIECDTDMPMEHVISEDDAECCICLSAYDDGTELRELPCRHHFHCSCLDKWLYINSTCPLCKFNILKMSN 253 N E Q GIM EC TD P+EH + ++DAECCICLSAY+DGTELRELPC HHFHCSC+DKWLYIN+TCPLCK+NILK SN Sbjct: 322 NDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSN 402
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 3.181e-33 Identity = 58/80 (72.50%), Postives = 66/80 (82.50%), Query Frame = 2 Query: 35 GGIMIECDTDMPMEHVISEDDAECCICLSAYDDGTELRELPCRHHFHCSCLDKWLYINSTCPLCKFNILKMSNERGSEEV 274 GG+M EC TD P+EH + +DAECCICLSAY+D TELRELPC HHFHC C+DKWLYIN+TCPLCK+NILK SN EEV Sbjct: 302 GGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKSSNYEEGEEV 381
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.333e-30 Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 2 Query: 2 EKVNGEIQEPFGGIMIECDTDMPMEHVISEDDAECCICLSAYDDGTELRELPCRHHFHCSCLDKWLYINSTCPLCKFNILKMSN 253 EK++G+ + GIM EC TD P+E +S +DAECCICL Y+DG ELRELPC HHFHC+C+DKWL+INS CPLCKFNILK +N Sbjct: 308 EKLSGKAR----GIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNILKNAN 387
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: ATL4O_ARATH (RING-H2 finger protein ATL4O OS=Arabidopsis thaliana GN=ATL4O PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.280e-12 Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 2 Query: 74 EHVISEDDAECCICLSAYDDGTELRELP-CRHHFHCSCLDKWLYINSTCPLCKFNILKMSNERGSEE 271 E I D EC ICL+ +D +R LP C H FH C+D WLY ++TCP+C+ N+ SN+ G E+ Sbjct: 113 ESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNKPGDED 179
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: RF12A_XENLA (E3 ubiquitin-protein ligase rnf12-A OS=Xenopus laevis GN=rnf12-A PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.006e-12 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 2 Query: 89 EDDA--ECCICLSAYDDGTELRELPCRHHFHCSCLDKWLYINSTCPLCKFNILKMSN 253 E+DA C +C++ Y +G +LR+LPC H +H C+D+WL NSTCP+C+ +L SN Sbjct: 561 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVASN 617
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: ATL3D_ARATH (RING-H2 finger protein ATL3D OS=Arabidopsis thaliana GN=ATL3D PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.006e-12 Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 74 EHVISEDDAECCICLSAYDDGTELRELP-CRHHFHCSCLDKWLYINSTCPLCKFNI 238 E E++ ECCICL +++G +++ LP C H +HC C+D+WL S+CPLC+ +I Sbjct: 97 ERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI 152
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: ZNRF3_MOUSE (Zinc/RING finger protein 3 OS=Mus musculus GN=Znrf3 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.536e-11 Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 2 Query: 71 MEHVISEDDAECCICLSAYDDGTELRELPCRHHFHCSCLDKWLYINSTCPLCKFNILKMSNERGS 265 ++ + S ++C ICL Y DG ELR +PC H FH C+D WL + TCP C+ NI++ G+ Sbjct: 279 LDTLSSGSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPGA 343
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: RNF12_MOUSE (E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.536e-11 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 89 EDDA--ECCICLSAYDDGTELRELPCRHHFHCSCLDKWLYINSTCPLCKFNILKMSN 253 E+DA C +C++ Y +G +LR+LPC H +H C+D+WL NSTCP+C+ +L N Sbjct: 539 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGN 595
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: RNF12_HUMAN (E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 2.006e-11 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 89 EDDA--ECCICLSAYDDGTELRELPCRHHFHCSCLDKWLYINSTCPLCKFNILKMSN 253 E+DA C +C++ Y +G +LR+LPC H +H C+D+WL NSTCP+C+ +L N Sbjct: 563 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGN 619
BLAST of EY662345 vs. ExPASy Swiss-Prot
Match: RNF12_XENTR (E3 ubiquitin-protein ligase rnf12 OS=Xenopus tropicalis GN=rnf12 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.620e-11 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 89 EDDA--ECCICLSAYDDGTELRELPCRHHFHCSCLDKWLYINSTCPLCKFNILKMSN 253 E+DA C +C++ Y +G +LR+LPC H +H C+D+WL NSTCP+C+ +L N Sbjct: 578 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVAGN 634 The following BLAST results are available for this feature:
BLAST of EY662345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY662345 ID=EY662345; Name=EY662345; organism=Citrus sinensis; type=EST; length=291bpback to top |