DN617320

Overview
NameDN617320
Unique NameDN617320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:16..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.456e-75
Identity = 139/207 (67.15%), Postives = 166/207 (80.19%), Query Frame = 1
Query:   64 FRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAY--NALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARF---GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 669
            F  PTMA+  L +  VSSA+DMSI+SYD+ H   ++  R++ EVM ++EAW VKHGKA   N+L EK++RFEIFKDNLRF+DEHN +N +Y++GL RFADLTN+EYRS YLGA+    G +RTSL      RY  RVG+ LP+S+DWRKKGAVAEVKDQG CGSCWAFSTI AVEGIN+IVTG LI+LSEQELVDCDTSYNEGCNGG
Sbjct:    3 FLKPTMAILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSL------RYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGG 203          
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.326e-62
Identity = 122/204 (59.80%), Postives = 148/204 (72.55%), Query Frame = 1
Query:   70 SPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 669
            S  +A   L L    +A DMSIVSY +         R+++E   ++  W  +HGK+YNA+GE+E+R+  F+DNLR+IDEHN+       ++++GLNRFADLTNEEYR  YLG R   +R   + K SDRYL    EALP+SVDWR KGAVAE+KDQG CGSCWAFS IAAVEGIN+IVTG LISLSEQELVDCDTSYNEGCNGG
Sbjct:    4 SMALAAAALLLLLSLAAADMSIVSYGE---------RSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRR---ERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGG 195          
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.476e-59
Identity = 121/207 (58.45%), Postives = 153/207 (73.91%), Query Frame = 1
Query:   55 MGLFRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGG 669
            MGL +S  ++M LLF  T+   L +S+        +K+ + RT+DEV  M+E+W +K+GK+YN+LGE E+RFEIFK+ LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS YLG   G+ +T    K S+RY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+DC  + N  GCNGG
Sbjct:    1 MGLPKS-FVSMSLLFFSTL---LILSLA-----FNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGG 194          
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 224.557 bits (571), Expect = 3.789e-58
Identity = 120/207 (57.97%), Postives = 152/207 (73.43%), Query Frame = 1
Query:   55 MGLFRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGG 669
            MGL +S  ++M LLF  T+   L +S+        +K+ + RT+DEV  M+E+W +K+GK+YN+LGE E+RFEIFK+ LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS YL    G+ +T    K S+RY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+DC  + N  GCNGG
Sbjct:    1 MGLPKS-FVSMSLLFFSTL---LILSLA-----FNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGG 194          
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.190e-57
Identity = 112/205 (54.63%), Postives = 146/205 (71.22%), Query Frame = 1
Query:   79 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYN----ALGEKEKRFEIFKDNLRFIDEHNSENR--TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR-SDRYLPRV-GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 669
            +++ LL++    ++ D SI++ D         WRTD+EV  ++  W  +HGK  N     + +++KRF IFKDNLRFID HN +N+  TYK+GL +F DLTN+EYR +YLGAR    R   K+K  + +Y   V G+ +P++VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG LISLSEQELVDCD SYN+GCNGG
Sbjct:    8 LSLLLLYVVVSLASGDESIIN-DHLQLPSDGKWRTDEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGG 211          
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.663e-54
Identity = 107/198 (54.04%), Postives = 143/198 (72.22%), Query Frame = 1
Query:   82 AMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGG 669
            A+ +L +  +SS+L ++         +++   R + EV  M+E W V++ K YN LGEKE+RF+IFKDNL+F+DEHNS  +RT++VGL RFADLTNEE+R++YL  +    + S+K+   +RYL + G+ LPD VDWR  GAV  VKDQG+CGSCWAFS + AVEGIN+I TG LISLSEQELVDCD  + N GC+GG
Sbjct:   12 ALVILSVLLLSSSLGVA---------TETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKT---ERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGG 197          
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.107e-52
Identity = 106/209 (50.72%), Postives = 141/209 (67.46%), Query Frame = 1
Query:   64 FRSPTMAMFLLFLFTVSSAL-------DMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 669
            F +P+++ F L +   +SAL       D SIV Y   H + +      D+++ +FE+W  +H KAY ++ EK  RFE+F++NL  ID+ N+E  +Y +GLN FADLT+EE++  YLG      + S K + S  +  R    LP SVDWRKKGAVA VKDQG CGSCWAFST+AAVEGIN+I TG+L SLSEQEL+DCDT++N GCNGG
Sbjct:    3 FSAPSLSKFSLLVAISASALLCCAFARDFSIVGYTPEHLTNT------DKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGG 203          
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.542e-51
Identity = 102/186 (54.84%), Postives = 132/186 (70.97%), Query Frame = 1
Query:  112 SSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 669
            +S+ D SIV Y            + D+++ +FE W     KAY  + EK  RFE+FKDNL+ IDE N + ++Y +GLN FADL++EE++ MYLG +    R   +   ++ +  R  EA+P SVDWRKKGAVAEVK+QGSCGSCWAFST+AAVEGINKIVTG+L +LSEQEL+DCDT+YN GCNGG
Sbjct:   26 ASSHDYSIVGYSP------EDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAE-FAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGG 204          
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.487e-51
Identity = 108/211 (51.18%), Postives = 139/211 (65.88%), Query Frame = 1
Query:   55 MGLFRSPTMAMFLLFLFTVS--SALDMSIVSYDKTHESKSSSWRT----DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 669
            MG  +S  M +FLL L   S  +A+DMS+VS +  H   +   R     D E   MFE+W VKHGK Y+++ EKE+R  IF+DNLRFI   N+EN +Y++GLNRFADL+  EY  +  GA     R  +    S+RY    G+ LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG
Sbjct:    1 MGYAKS-AMLIFLLALVIASCATAMDMSVVSSNDNHHVTAGPGRRQGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGG 209          
BLAST of DN617320 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.462e-50
Identity = 100/206 (48.54%), Postives = 137/206 (66.50%), Query Frame = 1
Query:   55 MGLFRSPTMAMFL-LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 669
            MG  +S  + + + + + + ++A+DMS+VSYD  +   S     D E   +FE+W VKHGK Y ++ EKE+R  IF+DNLRFI+  N+EN +Y++GL  FADL+  EY+ +  GA     R  +    SDRY     + LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG
Sbjct:    1 MGSAKSAMLILLVAMVIASCATAIDMSVVSYDDNNRLHSVF---DAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGG 202          
The following BLAST results are available for this feature:
BLAST of DN617320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
RD21A_ARATH4.456e-7567.15Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ4.326e-6259.80Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
ACTN_ACTDE4.476e-5958.45Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH3.789e-5857.97Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
GCP1_ARATH4.190e-5754.63Germination-specific cysteine protease 1 OS=Arabid... [more]
CPR1_ARATH5.663e-5454.04Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
XCP1_ARATH3.107e-5250.72Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
XCP2_ARATH1.542e-5154.84Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CPR4_ARATH4.487e-5151.18Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR3_ARATH8.462e-5048.54Probable cysteine proteinase At4g11310 OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01A20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617320 ID=DN617320; Name=DN617320; organism=Citrus sinensis; type=EST; length=671bp
CATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTTCTCC
AAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTTTTTC
TCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAA
ACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGG
TATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCTTTGG
GTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTT
back to top