CX044318

Overview
NameCX044318
Unique NameCX044318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.684e-82
Identity = 151/269 (56.13%), Postives = 189/269 (70.26%), Query Frame = 1
Query:   85 LEQKMAKIGGSLLVPCVQELVKNPMLV-VPPRYIRPDQDSPLNSDDTLIS-QIPVIDMQXXXXXXXXXXXXAKLDFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSVITLPVXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFE--NGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAF 879
            +E K A    S+LVP VQE+VK   +  VPPRY+R DQD     DD  +  +IP+IDM+             KLDFACK+WGFFQLVNHG+ S+FL+K+K E+Q FFNL MEEKKK+WQ P ++EGFGQAFVVSE+QKLDWAD+F     PV                DTLE+YS E++S+A  LI+KM + L IK EEL + F+  +  QSMRMNYYPPCPQP++V+GLTPHSD   LT+L+Q+N+VEGLQIK DGKW+P+ PLPNAF
Sbjct:    1 MEAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAF 269          
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.756e-49
Identity = 110/267 (41.20%), Postives = 150/267 (56.18%), Query Frame = 1
Query:   85 LEQKMAKIGGSLLVPCVQELVKNPMLVVPPRYIRPD--QDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSVITLPVXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAF 879
            + + +  +GGSL V  VQ L    +  +P RY+RP+   D  +  D++L  +IPVID+             AK   AC DWGFFQL+NHGV    +EK+K + + FF L  +EK  Y Q P  +EG+GQAFV SEEQKLDWAD+  +IT PV                +T+E YSMEL+ +AM L   M K L ++ E L +     F +      P      + +GL+PHSD + LT+L+Q+NEV GL IK D KW+PI P+  AF
Sbjct:    1 MSKNLTGVGGSLPVENVQVLAGKELKNLPNRYVRPELEHDDVVPIDNSL--EIPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRTVF-NREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAF 264          
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28
Identity = 78/261 (29.89%), Postives = 128/261 (49.04%), Query Frame = 1
Query:  133 VQELVKNPMLVVPPRYIRPDQDSPLNSDDTLIS------QIPVIDMQXXXXXXXXXXXXA--KLDFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYW--QHPGDVEGFGQAFVVSEEQKLDWADIFSVITLPVXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISKMGKVLNIKDEELRE---FFENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNA 876
            V+ L K+ ++ +P  YIRP ++    +D  L        Q+P ID++               +L  A  DWG   L+NHG+ +  +E++KK  + FF+LS+EEK+KY   Q  G ++G+G     +   +L+W D F  +  P                 +    Y+  L+ LA  +   +   L ++ + L +     E     M++NYYP CPQPE  +G+  H+D SALT +L  N V GLQ+  +GKW+    +P++
Sbjct:    7 VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPDS 266          
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.806e-28
Identity = 79/262 (30.15%), Postives = 125/262 (47.71%), Query Frame = 1
Query:  133 VQELVKNPMLVVPPRYIRPDQDSPLNSDDTLIS-------QIPVIDMQXXXXXXXXXXXXA--KLDFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYW--QHPGDVEGFGQAFVVSEEQKLDWADIFSVITLPVXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISKMGKVLNIKDEELRE---FFENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNA 876
            V+ L  + +  +P  YIRP +D  +N  D           Q+P ID++               KL  A  DWG   LVNHG+S   ++K++K  + FF+L +E+K+KY   Q  G ++G+G     +   +L+W D F     P                 +    Y+ +L+ LA  ++  +   L + +  L +     E     M++NYYP CPQPE  +G+  H+D SALT +L  N V GLQ+  +GKW+    +PN+
Sbjct:   11 VETLAGSGISTIPKEYIRP-KDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPNS 270          
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.806e-28
Identity = 82/278 (29.50%), Postives = 133/278 (47.84%), Query Frame = 1
Query:   88 EQKMAKIG-GSLLVPCVQELVKNPMLV-----VPPRYIRPDQDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAKL-DFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSVI-------TLPVXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAF 879
            E+   K+G G++  P    L+ NP ++     +P ++I PD + P  S + L   +P+ID+Q            ++L   ACK  GFF +VNHG+S   +    +    FF++ + EK++  +  G+  G+  +F      KL W +  S         +  V                   + Y   + SL++ ++  +G  L +K +  REFFE     MR+NYYPPC +P+  +G  PH D ++LTIL Q + V GLQ+  + +W  I P P AF
Sbjct:   12 EEDKPKLGLGNIQTP----LIFNPSMLNLQANIPNQFIWPDDEKP--SINVLELDVPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQ-DHVNGLQVFVENQWRSIRPNPKAF 282          
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27
Identity = 81/271 (29.89%), Postives = 127/271 (46.86%), Query Frame = 1
Query:  121 LVPCVQELVKNPMLVVPPRYIRPDQDSPLNSDDTLIS--------QIPVIDMQXXXXXXXXXXXXAK------LDFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYW--QHPGDVEGFGQAFVVSEEQKLDWADIFSVITLPVXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISKMGKVLNIKDEELRE---FFENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNA 876
            + P V+ L  + +  +P  YIRP ++  L S   +          Q+P ID++             +      L  A  +WG   LVNHG+S   + ++K   + FFNL MEEK+KY   Q  G + G+G     +   +L+W D F  +  P                      YS++L+SLA  ++S +   L +++  L +     E      ++NYYP CPQPE  +G+  H+D SALT +L  N V GLQ+  +GKW+    +PN+
Sbjct:    5 VAPRVESLSSSGIQSIPKEYIRPQEE--LTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPNS 272          
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27
Identity = 74/245 (30.20%), Postives = 117/245 (47.76%), Query Frame = 1
Query:  166 VPPRYIRPDQDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSVITLP-----VXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAF 879
            +P ++I P+ +SP   D      +P+ID+                 +  AC+  GFFQ+VNHG+ +  L    + V  FF + + EK++  +HPG+  G+  +F      KL W +  S  + P     V                +    Y  E+  L++ ++  +G+ L +     R FFE     MR+NYYPPC +P + +G  PH D ++LTIL Q N V GLQ+  +G+W  I P  +AF
Sbjct:   17 IPSQFIWPEGESP-TPDAAEELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAF 259          
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26
Identity = 75/262 (28.63%), Postives = 127/262 (48.47%), Query Frame = 1
Query:  133 VQELVKNPMLVVPPRYIRPDQDSPLNSDDTLIS--------QIPVIDMQXXXXXXXXXXXXA-KLDFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYW--QHPGDVEGFGQAFVVSEEQKLDWADIFSVITLPVXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREF---FENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNA 876
            V+ L K+ +  +P  Y+RP ++  LN    +          Q+P ID++              +L  A  +WG   LVNHG+S   + ++K   + FF+  +EEK+KY   Q  G+V+G+G     S   +L+W D F     P                      Y+ ++++LA  +++ +   L +++  L +     E+    M++NYYP CPQPE  +G+  H+D SALT +L  N V GLQ+  +G+W+    +PN+
Sbjct:   12 VESLAKSGIQAIPKEYVRPQEE--LNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGQWVTAKCVPNS 270          
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26
Identity = 73/245 (29.80%), Postives = 116/245 (47.35%), Query Frame = 1
Query:  166 VPPRYIRPDQDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSVITLP-----VXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAF 879
            +P ++I P+ +SP   D      +P+ID+                 +  AC+  GFFQ+VNHG+ +  L    + V  FF + + EK++  + PG+  G+  +F      KL W +  S  + P     V                +    Y  E+  L++ ++  +G+ L +     R FFE     MR+NYYPPC +P + +G  PH D ++LTIL Q N V GLQ+  +G+W  I P  +AF
Sbjct:   17 IPSQFIWPEGESP-TPDAAEELHVPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAF 259          
BLAST of CX044318 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.563e-26
Identity = 73/243 (30.04%), Postives = 114/243 (46.91%), Query Frame = 1
Query:  166 VPPRYIRPDQDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKDWGFFQLVNHGVSSAFLEKLKKEVQGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSV-----ITLPVXXXXXXXXXXXXXXXXDTL-EVYSMELKSLAMNLISKMGKVLNIKDEELREFFENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNA 876
            +P  ++ P+ D+   S   L   +  + +             A++  AC   GFFQ+  HGV +A           FF L + EK++  + PG V G+  A       KL W +  S         PV                  + + Y  E+K L++ ++  +   L ++    REFF +    MR NYYPPCP+PE+ +G  PH D +ALTILLQ ++V GL++  DG+W P++P+P A
Sbjct:   42 IPEPFVWPNGDARPASAAELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGA 283          
The following BLAST results are available for this feature:
BLAST of CX044318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
SRG1_ARATH2.684e-8256.13Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA1.756e-4941.20S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_ARATH1.709e-2829.89Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_MALDO3.806e-2830.15Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
GAOX1_ARATH3.806e-2829.50Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
LDOX_VITVI1.889e-2729.89Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
GAO1D_WHEAT1.889e-2730.20Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
LDOX_PETHY1.225e-2628.63Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
GAO1B_WHEAT1.225e-2629.80Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
GAOX2_ORYSJ3.563e-2630.04Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_16G06_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-16G06-M12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044318 ID=CX044318; Name=CX044318; organism=Citrus sinensis; type=EST; length=880bp
TAACTCTTGCGATTGTCTGCAGTCTGCACCCTGCACTCTTCTCCTAAAAC
CAATACAAAAGCTGTAGCAATCTTGAGAGGATTTTTGGAACAAAAGATGG
CCAAGATTGGAGGTTCTCTGCTTGTTCCTTGTGTTCAAGAGTTGGTCAAG
AATCCTATGTTAGTTGTCCCACCCAGATACATACGTCCGGATCAAGATTC
ACCACTCAATTCTGATGATACTTTGATTTCACAAATACCAGTTATTGACA
TGCAGAGCTTGCTTTCTGAAGAATCAATGGATTCTGAGTTAGCCAAGCTC
GACTTCGCTTGCAAAGATTGGGGTTTTTTCCAGCTGGTAAACCATGGAGT
GAGCTCGGCATTTCTAGAGAAATTGAAGAAAGAGGTTCAGGGATTCTTCA
ATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCATCCAGGAGATGTA
GAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTG
GGCTGACATTTTCTCCGTGATCACTCTTCCAGTTCATCTGAGGAAGCCAC
ACTTATTTCCTAAGCTTCCTCCTTTGCTCAGAGACACCTTGGAAGTTTAC
TCGATGGAGTTAAAATCTCTGGCCATGAACCTGATATCGAAAATGGGAAA
AGTTTTGAATATCAAAGATGAAGAATTGAGAGAATTCTTTGAAAATGGTT
TCCAATCAATGAGGATGAACTATTACCCTCCATGTCCTCAGCCGGAGAAG
GTTATGGGCCTCACCCCTCATTCTGATGGCTCTGCTCTTACCATTCTGCT
ACAAATCAATGAAGTAGAAGGTCTCCAGATCAAGAACGATGGAAAATGGA
TTCCTATCACACCGCTGCCAAATGCTTTCA
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