CX044244

Overview
NameCX044244
Unique NameCX044244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 8.579e-63
Identity = 128/204 (62.75%), Postives = 150/204 (73.53%), Query Frame = -3
Query:  150 KGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFTVNGFFF 761
            KGF+VTGSVCD S R EREKL+  VSS+F GKL+ILINN+G    K T++YTAEDFSF ++TN ESAY+L QLAHPLLKASG  +I+ M             SIY ATKGA+N LAR LACEWA D IR N+V+P  +ATPL E+  +DE F K V  R P+ R G+P E+SSLVAFLCMPAASYITGQTI  DGG TVNGF +
Sbjct:   61 KGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFM-SSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE-FKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTVNGFSY 262          
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.370e-60
Identity = 117/207 (56.52%), Postives = 149/207 (71.98%), Query Frame = -3
Query:  156 KTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFLNDEAFLKEVE---GRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFTVNGF 767
            + KGFKV+G VCDVSS  +R+ L+  V+S F+GKLNILINN GTTI K    +TAED+S +M TNFE++YNLCQLAHPLLKASG ASIV               SIY A+KGA+N + + LACEWA+D+IR N+V+PW + TP+ E+     +  K +E   GR PM+R G+P+E+SSLV +LC+P ASYITGQ I  DGG+TVNGF
Sbjct:   62 RRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIV-FNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAPWIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCLPTASYITGQIICVDGGYTVNGF 267          
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.622e-53
Identity = 106/209 (50.72%), Postives = 141/209 (67.46%), Query Frame = -3
Query:  153 KTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFLNDEAFLKEVEG----RTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFTVNGFF 767
            + KG  V GSVCD+ SR ER+KL+  V+ +FDGKLNIL+NN G  I K   ++T +D++ +M TNFE+AY+L Q+A+PLLKAS   +++ +             S+Y A+KGA+N + + LACEWA+DNIR NSV+P  + TPL E+ +      KE       +TPM R GKP E+S+L+AFLC PAASYITGQ I ADGGFT NG F
Sbjct:   66 REKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFL-SSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTANGGF 273          
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.088e-49
Identity = 103/208 (49.52%), Postives = 136/208 (65.38%), Query Frame = -3
Query:  153 KTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFLND---EAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFTVNGFF 767
            ++KGF V  SVCD+SSR ERE+ +  VS+ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V +             ++YGATKGAM+ L R LA EWA+DNIR N V P  +AT + E  + D   +  L ++  R  +RR G+P E++++VAFLC PAASY+TGQ I  DGGF  NG F
Sbjct:   54 RSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFI-SSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASYVTGQIIYVDGGFMANGGF 260          
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.088e-49
Identity = 102/205 (49.76%), Postives = 136/205 (66.34%), Query Frame = -3
Query:  162 KTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFLND---EAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFTVN 767
            ++KGFKV  SVCD+SSR ER++L+N V++ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V +             ++YGATKGAM+ L R LA EWA+DNIR N V P  +AT L E  + D   +  L ++  R  +RR G+P E++++VAFLC PAASY+TGQ I  DGG   N
Sbjct:   54 RSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFI-SSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMAN 257          
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.603e-19
Identity = 60/204 (29.41%), Postives = 106/204 (51.96%), Query Frame = -3
Query:  162 KTKGFKVTGSVCDVSSRIEREKLINQVSSLFD--GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFTVN 767
            + +G K + +V DV+   +++ +I+ V+++    G ++ILINN G   R    E++ +D+  LM+TN  + + + Q     +   G   IV +               Y ATKGA+ +L + +A +W +  ++ N ++P + AT +TE  + DE F   +  RTP  R G+  E+     FL   A+S++ GQ +  DGG TV+
Sbjct:   56 EAEGLKASTAVFDVT---DQDAVIDGVAAIERDMGPIDILINNAGIQRRAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAP-YTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEMTERLVADEEFTDWLCKRTPAGRWGQVEELVGAAVFLSSRASSFVNGQVLMVDGGITVS 255          
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.603e-19
Identity = 58/196 (29.59%), Postives = 99/196 (50.51%), Query Frame = -3
Query:  165 KVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFTV 752
            KV   V +V+ R + ++++ +V   + G++++L+NN G T     V    ED+  ++  N +  +N+ Q+  P +      SIV +             + Y A+K  +  + +  A E A  NIR N+V+P F+ TP+TE     E   +    R P+ R GKP E++ ++ FL    +SY+TGQ I  DGG  +
Sbjct:   55 KVDPYVLNVTDRDQIKEVVEKVVQKY-GRIDVLVNNAGITRDALLVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTN-YAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEKL--PEKARETALSRIPLGRFGKPEEVAQVILFLASDESSYVTGQVIGIDGGLVI 246          
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.297e-18
Identity = 61/205 (29.76%), Postives = 96/205 (46.83%), Query Frame = -3
Query:  165 KGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFL------NDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFTV 761
            +G + T  V DV         I +     +G+++IL+NN G     + ++ + +D  F +  N +  +N+ +   P + A     IV+M             + Y  TK A+  L + LA E+AQ  IR N++ P +V TP+ ES        + E+ L E+    PMRR   P E+  L AFL    +SY+TG     DGG T+
Sbjct:   52 RGHRCTAVVADVRDPASVAAAIKRAKEK-EGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTL 255          
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.889e-18
Identity = 60/205 (29.27%), Postives = 96/205 (46.83%), Query Frame = -3
Query:  165 KGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFL------NDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFTV 761
            +G + T  V DV         I +     +G+++IL+NN G     + ++ + +D  F +  N +  +N+ +   P + A     IV+M             + Y  TK A+  L + LA E+AQ  IR N++ P +V TP+ ES        + E+ L E+    P+RR   P E+  L AFL    +SY+TG     DGG T+
Sbjct:   52 RGHRCTAVVADVRDPASVAAAIKRAKEK-EGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTL 255          
BLAST of CX044244 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18
Identity = 49/167 (29.34%), Postives = 85/167 (50.90%), Query Frame = -3
Query:  171 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMXXXXXXXXXXXXXSIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVATPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 671
            G ++IL+NN G   R+  +E++ +D+  +M  N +S + + Q A     A G    ++                Y A+K  +  + R++A EWA+ NI  N+++P ++AT  T+    DE    E+  R P  R G P+++   + FL   A+ Y+ G TI+ DGG+
Sbjct:   84 GHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDGGW 250          
The following BLAST results are available for this feature:
BLAST of CX044244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
TRNH1_ARATH8.579e-6362.75Tropinone reductase homolog At1g07440 OS=Arabidops... [more]
TRNH_DATST1.370e-6056.52Tropinone reductase homolog OS=Datura stramonium P... [more]
TRN1_DATST1.622e-5350.72Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
TRN2_HYONI1.088e-4949.52Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
TRN2_DATST1.088e-4949.76Tropinone reductase 2 OS=Datura stramonium GN=TR2 ... [more]
GNO_GLUOX7.603e-1929.41Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]
FABG_THEMA7.603e-1929.593-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
UCPA_ECOLI1.297e-1829.76Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
UCPA_ECO572.889e-1829.27Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
KDUD_ECOLI3.773e-1829.342-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_16C10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-16C10-E20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044244 ID=CX044244; Name=CX044244; organism=Citrus sinensis; type=EST; length=772bp
TTAAAAGGGAAATAAACGACAATCGAAAAGATGAGTCAAAAATCAAAAGA
GATACATGCTGGCGGTTTATTAGGGCCTGAGAAATCACAACACTAAGTTA
TCAGATTCGAAGATTTCAGAGAAGTGGACAAAATAAATCAGGTACTTGGG
AAGAAGAATCCATTCACTGTAAATCCTCCGTCAGCGGAAATTGTCTGACC
AGTTATATAAGAGGCTGCAGGCATGCATAAAAATGCTACCAATGAAGATA
TCTCATTTGGCTTCCCTGTGCGTCTCATTGGAGTTCGACCCTCGACTTCC
TTTAAAAATGCCTCATCATTCAGAAAAGATTCAGTTAAAGGAGTCGCGAC
GAACCAAGGTGAGACAGAATTGGTCCTAATATTATCTTGAGCCCACTCGC
ATGCCAAAATCCTCGCAAGATGGTTCATGGCTCCTTTCGTAGCTCCATAT
ATGGATCCAACGTCAACAACTGACACCACCCCACAAACAGAAGACATTAG
AACAATACTTGCTGCCCCCGAAGCTTTCAAAAGAGGATGTGCAAGTTGGC
ACAGATTGTAAGCAGACTCAAAATTGGTAGCCATGAGAAACGAGAAATCT
TCTGCTGTGTACTCCACAGTCGCCTTTCTTATAGTCGTCCCGACGTTGTT
TATGAGAATGTTAAGTTTTCCATCGAACAGAGAGGAGACTTGGTTTATAA
GCTTTTCCCGTTCAATTCGAGATGATACATCGCACACTGAACCGGTGACT
TTGAAGCCTTTAGTTTTCCCCT
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