CX044227

Overview
NameCX044227
Unique NameCX044227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX044227 vs. ExPASy Swiss-Prot
Match: ARGE_DICDI (Acetylornithine deacetylase OS=Dictyostelium discoideum GN=argE PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.985e-47
Identity = 93/191 (48.69%), Postives = 125/191 (65.45%), Query Frame = -1 
Query:  279 FPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPD----ENIRGSLTLTF-DEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLIREIQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 836
            F PHPKE  Y F+  STMKPT W    G  N IPGE T+ GD+RLTPFY++ ++  +++ Y+ DIN NI +L  RGP SKY +P     E ++GS+++ +  EA+ GVAC LDS G+  L KAT E++G + P +  GTLPL+R++QD GFD+Q  G+G   TYHADNEY LLSD     ++    I  LE
Sbjct:  255 FKPHPKEAEYKFDCSSTMKPTLWKPIAGSYNTIPGESTICGDIRLTPFYDMKEMRAKVEGYIKDINANITELRNRGPYSKYDVPASEGVEPVKGSVSIEWLGEASAGVACKLDSDGYKALGKATSEILGSLTPVATCGTLPLVRDLQDSGFDIQITGFGKEETYHADNEYALLSDFKNAIKILSRTIDLLE 445
The following BLAST results are available for this feature:
BLAST of CX044227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ARGE_DICDI1.985e-4748.69Acetylornithine deacetylase OS=Dictyostelium disco... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_16C01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-16C01-E2-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044227 ID=CX044227; Name=CX044227; organism=Citrus sinensis; type=EST; length=836bp
TTATTTGTCCCAATGACTGCTGTAAAATTGTATAGTTTATTGAATGTTGT
AGTAGTAGTAGTAGTAGTACTAGTAGTAATAACAACAACAACAACAACAA
CAACAACAACAACAACAACAATAATAATAATAATAATAATAATAATTATT
ATTATTATTATGATTATTAATCCAAATTGTATGAACTCCAGTTAAAATAA
TCGCCATTAAGAATTTGTAAAGCTGGAAACTCAGCTCATTAAAATAGCAC
TAGCACATTTCGAATTACAGAGTCAATCTTCTAACTGGGAGATGATACTG
ACGAAAACTTGATAGCCTTGGCACATATCAGAAAGAAGACAGTACTCGTT
GTCAGCATGGTACGTCGCCATTAAACCATAGCCTGCAGTTTGCACATCAA
AACCTTCATCTTGAATCTCTCGAATGAGAGGCAACGTCCCTGTGATTGAG
TAAGGATTTACATGCCCAACTACCTCTTCAGTTGCCTTGCACAAGACATG
AAAGCCACGAGAATCAAGATTACAAGCAACTCCATTAGTCGCCTCATCAA
AAGTCAATGTAAGGCTTCCCCTGATGTTTTCATCAGGTAGAACATATTTT
GAAACTGGACCTCGTGTATCCAGCTTCTCTATGTTCTCGTTTATGTCATC
CACATATTCTTGTAGTCTCTTCATCACATCAGTCACATTGTAGAACGGAG
TTAACCTGACATCCCCTGAAACTGTACATTCACCAGGAATCTGATTGATC
CCGCCTCCAGGATAACTCCATTGGGTTGGTTTCATTGTTGATGGTGTTTC
AAATCCATAGACCTGCTCCTTCGGATGAGGTGGAAA
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