CX044220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.059e-86 Identity = 163/213 (76.53%), Postives = 180/213 (84.51%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXN--DLHDQNIV--IQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTS 874 MSFRSIVRDVRDS GSLSRRSFDF+L+ + D H++ +V IQ + WA+LPPELL DVIKRLEESES WPAR+HVVACA+VCRSWR MCKEIV+SPE GK+TFPVSLKQPG RD T+QCFIKRDKSNLTYHL+LCLSPALLVENGKFLLSAKR RRTT TEYVISM AD ISRSS+TYIGK+RSNFLGTKFIIYDTQP + S Sbjct: 1 MSFRSIVRDVRDSIGSLSRRSFDFKLSSLNKEGGKSRGSVQDSHEEQLVVTIQETPWANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNS 213
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.059e-86 Identity = 158/217 (72.81%), Postives = 180/217 (82.95%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQN------IVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSAN 880 MSFR IV+D+RD FGSLSRRSFDFRL+ + + +++Q S WA+LPPELL DVIKRLEESES+WPARKHVVACA+VCRSWRAMC+EIV PE CGKLTFPVSLKQPG RD IQCFIKRDKS LT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDADNISRSS++Y+GKLRSNFLGTKF++YDTQPP +++ Sbjct: 1 MSFRGIVQDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSS 217
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.997e-85 Identity = 160/218 (73.39%), Postives = 179/218 (82.11%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFDFRL------TXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANI 883 MSFRSIVRDVRDSFGSLSRRSF+ L T ++L D +++IQ S WASLPPELL DVI+RLE SES+WP+RK VV+CAAVC++WR MCKEIV SPEFCGKLTFP+SLKQPG RDG IQCFIKRDKS TYHL+LCLS A+L ++GKFLLSAKR R+TTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQP + A I Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVI 218
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 4.604e-82 Identity = 147/218 (67.43%), Postives = 177/218 (81.19%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFDFR------LTXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANI 883 MSFRSIVRDVRDSFGSLSRRSF+ R L+ ++L D+ +V+ S W LPPELL DV+KRLEE ES+WP+RK VVACAAVCR+WR +CK+IV+SPE CGKLTFPVSLKQPG RDG IQCFIKRDKS LTY+L+LCLSPA+L ENGKFLL+AKR RR T TEY+IS+D+ NISRSS+ Y+GK+RSNFLGTKF++YDTQPP+ + ++ Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSRWVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSL 218
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.340e-81 Identity = 149/218 (68.35%), Postives = 175/218 (80.28%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQNI------VIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANI 883 MSFRSIVRDVRD FGSLSRR F+ RL ++L D + V+Q+SCWA+LPPELL DVI+RLE SE++WP+RK+VVACAAVCR+WR MC+EIV++PEFCGK+TFPVSLKQPG R+G IQCFIKRDKS TY+L+LCLS A+LVE+GKFLLSAKR R TCTEY I M ADN SRSS+ YIGKLRSN LGTKF+IYDTQPP +AN+ Sbjct: 1 MSFRSIVRDVRDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHAAAAAADVVQSSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANV 218
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.340e-81 Identity = 143/211 (67.77%), Postives = 174/211 (82.46%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSAN 880 MSFRSIVRDVRD FGSLSRR F+ R+ ++LHD VIQ+SCWASLPPELL D+I+RLEESE++WP+RKHVVACA VCR+WR MCKEIV++PE CGK+TFP+SL+QPG RDGT+QCFI+RDKS TY+L+L L A+LV+NGKFLLSAKR TCTEYVISM+A+N+SRS++T IGKLRSNFLGTKF+IYDT P+ + + Sbjct: 1 MSFRSIVRDVRDGFGSLSRRGFEVRILGHRRGKSHGAVHELHDPVPVIQSSCWASLPPELLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGPRDGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTNTNIGKLRSNFLGTKFVIYDTHTPYNATS 211
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 2.984e-81 Identity = 149/215 (69.30%), Postives = 175/215 (81.40%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXX---NDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANI 883 MSFRSIVRD RDSFG+LS+RSF+ +++ ++L D +V Q S WA LPPELL DV+KRLEE +S+WP+RK VVACA+VC +WR MCK+IVR+PEFCGKLTFPVSLKQPG RDG IQCFIKRDKS LTYHL+LCLS A+L E GKFLLSAKR+RRTT T+Y+ISMD+ NISRSSS YIGKLRSNFLGTKFIIYDTQPP+ + + Sbjct: 1 MSFRSIVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQSKWAGLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQPGPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKNISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTL 215
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 5.628e-80 Identity = 150/214 (70.09%), Postives = 177/214 (82.71%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXN-DLHDQN-IVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANI 883 MSF SIVRDVRD+ GS SRRSFD R++ + H ++ IVI+N+ WA+LP LL DV+K+L+ESES+WPARK VVACA VC++WR MCK+IV+SPEF GKLTFPVSLKQPG RDG IQC+IKRDKSN+TYHL+L LSPA+LVE+GKFLLSAKR+RR T TEYVISMDADNISRSSSTYIGKL+SNFLGTKFI+YDT P + S+ I Sbjct: 1 MSFLSIVRDVRDTVGSFSRRSFDVRVSNGTTHQRSKSHGVEAHIEDLIVIKNTRWANLPAALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQI 214
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.447e-75 Identity = 142/216 (65.74%), Postives = 165/216 (76.39%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFD------FRLTXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSA 877 MSFRSIVRDVRD FGSLSRRSF+ + LT ++L D +I S WASLPPELL +VI+RLE ES+WP+R++VV AAVCR+WR MCKE V SPEFCGKLTFPVS+KQPG RDG IQC+IKR++S TYHL+LCLS + E GKF+L+AKR R+TTCTEY ISM + NISRSS T IGKLRSNFLGTKFIIYDTQPP+ A Sbjct: 1 MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESRWASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSIKQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMVSGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGA 216
BLAST of CX044220 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.376e-62 Identity = 113/215 (52.56%), Postives = 156/215 (72.56%), Query Frame = 2 Query: 248 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQNIVI---QNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANI 883 MSF+S+++D+R GS+SR+ FD R + D ++ + + SCWAS+PPELL DV+ R+E+SE +WP+RK+VV+CA VCR+WR + KEIVR PE KLTFP+SLKQPG R +QC+I R++SN TY+L+L L+ A ++GKFLL+AKR RR TCT+Y+IS++ D++SR S+TYIGKLRSNFLGTKF +YD QP + + Sbjct: 1 MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRV----VQDTSVPVDAFKQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQV 211 The following BLAST results are available for this feature:
BLAST of CX044220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044220 ID=CX044220; Name=CX044220; organism=Citrus sinensis; type=EST; length=884bpback to top |