CX044219

Overview
NameCX044219
Unique NameCX044219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.146e-66
Identity = 137/194 (70.62%), Postives = 149/194 (76.80%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELL---PRSLEDSFRS-ISFSKS-LDH-SVDFSSARFSEIGALRED-DEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXP-----EHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELNVLGTRGPRRMHCIM+SIP SS++ GGSVP QPE L   P SL+DSFRS ISFSKS  DH S+DFSS+RFSE+G   +D +E+   RPLILKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL+                       E DK+ILQFGKVGKDMFTMDYRYPL AFQAFAICLSSFDTKLACE
Sbjct:  252 ELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445          
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.656e-64
Identity = 136/196 (69.39%), Postives = 150/196 (76.53%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSLEDSFRSI-SFSKS--LDHSVDFSS------ARFSEI-GALREDDEDG--KLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXP-EHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELNVLGTRGPRRMHC+MHSIPASS++ GG VPGQPE ++PR+ E+SFRS  SFSKS  +D S+DFSS      ARFS+I G     DE+G  K RPL+L+NK PRWHEQLQCWCLNFRGRVT+ASVKNFQLI                 P E DKIILQFGKV KDMFTMDYRYPL AFQAFAICLSSFDTKLACE
Sbjct:  250 ELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445          
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.162e-64
Identity = 130/199 (65.33%), Postives = 153/199 (76.88%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSLEDSFRSI-----------SFSKSL-DHSVDFSSARFSEI-GALREDDEDGKL--RPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLI-XXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELNVLGTRGPRRM C+MHSIPASS++ GG VPGQPE ++PR+LEDSFRS            SFSKS+ D S+DFSSARFS+I G++   D++G++  RPL+L+NKPPRWHEQLQCWCLNFRGRVT+ASVKNFQL+                   + +K+ILQFGKV +DMFTMDYRYPL AFQAFAICLSSFDTKLACE
Sbjct:  250 ELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTTSFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHEQLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGPADPEKVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 448          
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 8.216e-64
Identity = 128/196 (65.31%), Postives = 149/196 (76.02%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSLEDSFRSISFSKS--LDHSVDFSSARFSEI--------GALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXP---EHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELNVLGTRGPRRM+C+MHSIPASS++ GG+VP QP+ +L RSL++SF SISFSKS  +D S+ FSS+R+S+I        G    D ++ K RPLIL+NK PRWHEQLQCWCLNF+GRVTVASVKNFQL+                 P   +HDK+ILQFGKV KDMFTMDYRYPL AFQAFAICLSSFDTKLACE
Sbjct:  250 ELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDESFGSISFSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445          
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.550e-62
Identity = 136/206 (66.02%), Postives = 150/206 (72.82%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELL-PRS-LEDSFRSISFSKS----LDHSVDFSSARFSEI-GALREDDE----DGKLR---PLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEH----------DKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELNVLGTRGPRRMHC M+SIPASS+  GG+VPGQP+++ PRS L++SFRSI+ S S     D+S DFSSARFS+I G L ED E    +GK R   PL+LKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLI                              DKIILQFGKVGKDMFTMD+RYPL AFQAFAICLSSFDTKLACE
Sbjct:  250 ELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSITSSSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455          
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.024e-62
Identity = 131/198 (66.16%), Postives = 146/198 (73.74%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSL-EDSFRSISFSKS--LDHSVDFSSARFSEI---------GALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLI---XXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELNV GTRGPRRM C+MHSIPASS++ GG+VP QP+ +L  SL E SFRS+SFSKS  +DHS+ FSSA+FS+I         G +  DDE+ K  PLIL+NK PRWHEQLQCWCLNFRGRVTVASVKNFQLI                    PEHDK+ILQFGKV KDMFTMDY YPL AFQAFAI LSSFDTKLACE
Sbjct:  243 ELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKSSVMDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE 440          
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.312e-61
Identity = 134/216 (62.04%), Postives = 148/216 (68.52%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQP-ELLPRSLEDSFRSI--SFSKS--LDHSVDFSSARFSEIG--ALR--EDDEDG----KLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPE---------------------HDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELNVLGTRGPRRM C MHSIPAS+++ GG VPGQP ELLPR  E+SFRS+  SFSK    DHS DFSS+RFSE G  AL+  E ++DG    K RPL+L+NK PRWHEQLQCWCLNFRGRVTVASVKNFQLI                  +                     HD +ILQFGKV KDMFTMDYRYPL AFQAFAICL+SFDTKLACE
Sbjct:  247 ELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMATSFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462          
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.985e-61
Identity = 128/202 (63.37%), Postives = 142/202 (70.30%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSLEDSFRSISFSKS---LDHSVDFSSARFSEI-GALREDDED----GKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPE-----------HDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELNVLGTRGPRRM C MHSIPAS++D  G VPGQPE LLP   E+SFRS + S     +D S+DFSS+RFSEI G+  +  ED     K RPL+L+NK PRWHEQLQCWCLNFRGRVTVASVKNFQLI                  +           H K+ILQFGKVGKDMFTMDYRYPL AFQAFAICL+SFDTKLACE
Sbjct:  250 ELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTNTSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451          
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.149e-57
Identity = 115/194 (59.28%), Postives = 136/194 (70.10%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLI------------XXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELN+LGTRGPRRM+CIMHSIP+ +++ GG+VP QPE L RSL++SFRSI  SK ++HS DF+          R  +E+GK+RPL+LK KPPRW + L+CWCLNF+GRVTVASVKNFQL+                               HDKIIL FGKVGKDMFTMDYRYPL AFQAFAI LS+FDTKLACE
Sbjct:  246 ELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSSKIVNHSGDFT----------RPKEEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVASVKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRYPLSAFQAFAISLSTFDTKLACE 429          
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.099e-51
Identity = 107/182 (58.79%), Postives = 124/182 (68.13%), Query Frame = -2
Query:  254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799
            ELNVLG RGPRRM+CIM SIP S++  GG  P Q E  P S  DSF SISF +S    +D ++++ S            K   L+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL+                  E DK+ILQFGK+GKD+FTMDYRYP+ AFQ+FAICLSSFDTK+ACE
Sbjct:  241 ELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEF-PLSGLDSFPSISFFRSKSARIDSATSQLST----------QKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDENGPTNQ--------EQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 403          
The following BLAST results are available for this feature:
BLAST of CX044219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
TLP10_ARATH5.146e-6670.62Tubby-like F-box protein 10 OS=Arabidopsis thalian... [more]
TLP8_ORYSJ1.656e-6469.39Tubby-like F-box protein 8 OS=Oryza sativa subsp. ... [more]
TLP3_ORYSJ2.162e-6465.33Tubby-like F-box protein 3 OS=Oryza sativa subsp. ... [more]
TLP14_ORYSJ8.216e-6465.31Tubby-like F-box protein 14 OS=Oryza sativa subsp.... [more]
TLP1_ARATH1.550e-6266.02Tubby-like F-box protein 1 OS=Arabidopsis thaliana... [more]
TLP13_ORYSJ2.024e-6266.16Tubby-like F-box protein 13 OS=Oryza sativa subsp.... [more]
TLP7_ORYSJ1.312e-6162.04Tubby-like F-box protein 7 OS=Oryza sativa subsp. ... [more]
TLP12_ORYSJ4.985e-6163.37Tubby-like F-box protein 12 OS=Oryza sativa subsp.... [more]
TLP5_ARATH1.149e-5759.28Tubby-like F-box protein 5 OS=Arabidopsis thaliana... [more]
TLP6_ORYSJ2.099e-5158.79Tubby-like F-box protein 6 OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_16B08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-16B08-C16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044219 ID=CX044219; Name=CX044219; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTTTTTTTTTTTTATTCATAATATGACTGACAAATAAAGATAATGT
CTCAAAGGTAACAATATGATTCAAGTTTACAATTATATAATTCCTGCCGC
TAGAGTTACAATTGAAATTTTACAATAAATGAATAACATTAACAGCAATT
CCCTATCCTGCACTGAACGTATAGGAAACAAATTACAAAGAAAAATGGGG
AAAAGAGATGTCGCAGTCCACCAAACTTTTGATATCTATCATTTATTGTT
CTATTCACAGGCCAGTTTGGTGTCAAAGCTGCTCAAGCAAATAGCAAACG
CCTGAAATGCAAAGAGTGGATAACGATAGTCCATAGTAAACATATCTTTC
CCAACCTTGCCAAACTGGAGAATGATCTTATCATGTTCAGGTGGCGCTGG
TTGAGAGGGAGTGGGTGCACCGGCAGCTGGTTGTGTAGCTGCAATCAACT
GAAAATTCTTAACAGATGCGACAGTCACCCGCCCCCGAAAATTGAGACAC
CAACACTGTAATTGTTCATGCCATCTTGGGGGCTTGTTTTTGAGGATCAA
GGGTCTCAATTTGCCATCCTCATCATCCTCTCTAAGCGCACCAATTTCAG
AAAATCGTGCGCTGCTGAAGTCAACAGAGTGATCCAGTGATTTTGAGAAG
GAGATGCTCCGGAATGAGTCCTCAAGAGAGCGGGGAAGAAGCTCTGGCTG
GCCAGGAACAGAGCCACCTACATCAATTGATGAGGCTGGGATTGAGTGCA
TGATGCAGTGCATCCTTCTGGGGCCTCGTGTGCCAAGCACATTGAGTTCA
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