CX044217

Overview
NameCX044217
Unique NameCX044217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: PREA_CYAPA (Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.009e-40
Identity = 87/164 (53.05%), Postives = 118/164 (71.95%), Query Frame = -3
Query:  340 FDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 831
            F  DL LEEYL KS+YKTASL+AAS+K AA+ S VD +++  +Y YGR+LGL+FQIVDDILDFT S E+LGKP+ SDL KGNLTAPV+FALE+  +L  +I+ +F E    +  +++V+ +  IE+ +ELA E A +AI  L  LP S  + AL+ +  + LER
Sbjct:  158 FKVDLTLEEYLEKSFYKTASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSCSDLKKGNLTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQVAIQCLENLPPSSSKEALKLITKYVLER 321          
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: PREA_SYNY3 (Prenyl transferase OS=Synechocystis sp. (strain PCC 6803) GN=preA PE=3 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.290e-38
Identity = 84/164 (51.22%), Postives = 111/164 (67.68%), Query Frame = -3
Query:  340 FDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 831
            FD D +LE YL KSY+KTASLIA S K A + S     +   +YEYG++LGL+FQIVDDILDFT   E LGKPA SDL  GN+TAP +FA+EK P L ++IE EF + G L++A++LV+   GI  ++ELA  +A LA  +L  L  S  R +L ++V + L R
Sbjct:  158 FDTDTDLETYLEKSYFKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTSPTEVLGKPAGSDLISGNITAPALFAMEKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAANQAQLARQHLSVLEMSAPRESLLELVDYVLGR 321          
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: PREA_PORYE (Prenyl transferase OS=Porphyra yezoensis GN=preA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.991e-36
Identity = 72/164 (43.90%), Postives = 115/164 (70.12%), Query Frame = -3
Query:  340 FDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 831
            FD  + ++ Y+ KS+YKTASLIAAS +GAA+ +G +  ++  +Y YG+++GL+FQI+DD+LD T S + LGKPA +DL  GNLT+P++F+L +E  L ++I+ EFC +  +   + L+K SGGI +A++LAKE+   A+  L  LP+S    +L+++  F + R
Sbjct:  158 FDPSISIDAYIEKSFYKTASLIAASCRGAAMLNGSNHQINNDLYLYGKHMGLAFQIMDDVLDITGSTKSLGKPAGADLINGNLTSPLLFSLTQEASLNDLIDREFCNSTDIASTLFLIKRSGGITKAKDLAKEQVQAALSCLQFLPQSTPVSSLKELTHFIITR 321          
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: PREA_CYACA (Prenyl transferase OS=Cyanidium caldarium GN=preA PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.651e-35
Identity = 80/165 (48.48%), Postives = 107/165 (64.85%), Query Frame = -3
Query:  337 FDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLERF 831
            F+    + +YL KS+ KTASLIAAS K   + S  D SL+ + Y YG+NLGL+FQI+DDILD T S+  LGK   SDL  GNLTAPV+FAL K  KL +IIE EFCE   + EAI ++K +  IEE+ +LA E    AI+++  LP S  + +L ++    L R+
Sbjct:  158 FNTYYSIIKYLEKSFNKTASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTSDLKLGNLTAPVLFALTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIEAAINSIKDLPTSSEKDSLIEIAYDLLNRY 322          
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: PREA_PORPU (Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.476e-34
Identity = 70/164 (42.68%), Postives = 114/164 (69.51%), Query Frame = -3
Query:  340 FDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 831
            FD  + +++Y+ KS+YKTASL+AAS +GAA+ + ++  +   +Y YG+++GL+FQI+DD+LD   S + LGKP+ +D   GNLTAP++FAL +E KL ++I+ EF +   +  A+ L+K SGGI +A++LAKE+   A+  L  LP+S    +L+++  F + R
Sbjct:  158 FDPSISIDDYIEKSFYKTASLVAASCRGAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLTAPILFALTQEGKLDQLIQREFSDERDISLALFLIKKSGGITKAKDLAKEQVQAALCCLQFLPKSAPVSSLKELTHFIITR 321          
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: DPS1_DICDI (Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.429e-29
Identity = 69/147 (46.94%), Postives = 98/147 (66.67%), Query Frame = -3
Query:  379 LELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFR 819
            +  + YL K+Y KT SLI  S + AAI SG D ++     E+G+NLGL+FQIVDD+LD+T SAE+ GK  + DL  G  TAPV++A ++ P+L ++I+ +F E G ++EA +LV  S GIE+ + LA E  N AI +L  LP+S  R
Sbjct:  295 VSFDNYLQKTYLKTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLAIEYCNRAIQSLLKLPQSESR 441          
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: COQ1_YARLI (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Yarrowia lipolytica GN=COQ1 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.264e-29
Identity = 66/157 (42.04%), Postives = 101/157 (64.33%), Query Frame = -3
Query:  340 EEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 810
            E Y+ K+Y KTASL++ S + AA+ SG    +    Y++G+NLGL FQ+VDD+LD+++    LGKPA +DL  G  TAPV+FA EK P+L ++I+ +F   G ++ A  LV+ + G+   +ELA++  + A+ NL  LP S  R AL ++ M  + R
Sbjct:  294 EYYIHKTYLKTASLMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDYSEGESHLGKPAGADLKLGLATAPVLFAWEKYPELGDMIKRKFDGPGDVERARFLVQQADGLSRTRELAQKYCDEAVANLDLLPYSESREALRNLTMKMMNR 450          
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: COQ1_YEAST (Hexaprenyl pyrophosphate synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=COQ1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.598e-28
Identity = 67/149 (44.97%), Postives = 97/149 (65.10%), Query Frame = -3
Query:  367 EEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLH-CLPRSPFRVALE 810
            E Y+ K+Y KTA+LI+ S + AAI SG   ++  + Y++GRNLG+ FQ+VDD+LDFT S + LGKP+ +DL  G  TAPV+FA +++P L  +I   F E G +++ I  V+   GI + + LA+E  + A+ NL   LP S  R ALE
Sbjct:  314 EYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPSLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESDARSALE 462          
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: COQ1_NEUCR (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Neurospora crassa GN=NCU02305 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.639e-27
Identity = 66/158 (41.77%), Postives = 99/158 (62.66%), Query Frame = -3
Query:  340 LEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 813
            L  YL K+Y KTASLI+ S + +A+  G D +     Y YG+NLGL+FQ+VDD+LD+T+S ++LGKPA +DL  G  TAP++FA +  P+L  ++  +F + G    A +LV  S GIE+ + LA++ A  AI  +   P S  +  L +M +  L+R
Sbjct:  290 LTYYLQKTYLKTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLLFAWKTMPELGPLVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEKAIEAISGFPDSEAKDGLIEMAVKTLKR 447          
BLAST of CX044217 vs. ExPASy Swiss-Prot
Match: DPS1_HUMAN (Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.870e-24
Identity = 57/145 (39.31%), Postives = 91/145 (62.76%), Query Frame = -3
Query:  370 YLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVAL 804
            YL K++ KTASLIA S K  ++    D  + +  Y+YG+N+G++FQ++DD+LDFT  ++Q+GKP ++DL  G  T PV+FA ++ P++  +I   F   G +D A + V  S G+++   LA++  + AI  +  L  SP R AL
Sbjct:  259 YLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPERDAL 403          
The following BLAST results are available for this feature:
BLAST of CX044217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
PREA_CYAPA4.009e-4053.05Prenyl transferase OS=Cyanophora paradoxa GN=preA ... [more]
PREA_SYNY31.290e-3851.22Prenyl transferase OS=Synechocystis sp. (strain PC... [more]
PREA_PORYE5.991e-3643.90Prenyl transferase OS=Porphyra yezoensis GN=preA P... [more]
PREA_CYACA8.651e-3548.48Prenyl transferase OS=Cyanidium caldarium GN=preA ... [more]
PREA_PORPU1.476e-3442.68Prenyl transferase OS=Porphyra purpurea GN=preA PE... [more]
DPS1_DICDI1.429e-2946.94Decaprenyl-diphosphate synthase OS=Dictyostelium d... [more]
COQ1_YARLI9.264e-2942.04Probable hexaprenyl pyrophosphate synthetase, mito... [more]
COQ1_YEAST4.598e-2844.97Hexaprenyl pyrophosphate synthetase, mitochondrial... [more]
COQ1_NEUCR6.639e-2741.77Probable hexaprenyl pyrophosphate synthetase, mito... [more]
DPS1_HUMAN6.870e-2439.31Decaprenyl-diphosphate synthase subunit 1 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_16B07_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-16B07-C14-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044217 ID=CX044217; Name=CX044217; organism=Citrus sinensis; type=EST; length=836bp
GTAACTTGACAGAGAAAATTAAAAAAAATGAATAATATGACTTGCCATTA
TTAATGGCCATTTAGCTTTATTGTACAACAATGGTTACTGATTTCTTTTC
TTGCATCCAAGTCGAGGCATGTGCTTGAATAAACAAATATTATGAGCCAG
AATATACAACCAGGCACGAGCAGCTTGGCTTTGGTATGAATCACTGATGG
TGAACATGAGAAAAGGCACAGTCAACACTGTAGAGGCTTTTGCTTCAACT
TTTATTTCCTTGTCCTTGTGTATCCTCGTAAATGGGTGTTTTCTGTCAAG
AAGTAACACGCGTGGTAAACTAATTTTGAACTAAACAAATCGTTCAAGAT
TGAACATCACCATATCCTCGAGAGCCACTCGAAAGGGACTCCGAGGAAGA
CAATGGAGGTTATGAATTGCAAGATTGGCCTTCTCTTTCGCTAATTCTTG
TGCCTCCTCAATGCCTCCTGAAGTCTTAACCAACTTAATGGCTTCATCGA
GGGAACCAGTCTCACAGAATTCAGATTCAATGATTTCTCTCAATTTTGGC
TCTTTCTCTAGAGCAAATATAACCGGTGCTGTCAGGTTTCCTTTTGCCAG
GTCACTGGCTGCTGGCTTACCCAGCTGCTCTGCTGACTGTGTGAAATCCA
ATATGTCGTCGACAATCTGGAAAGACAGACCAAGATTCCTACCATATTCA
TACATTTGCTTGGACAAACTGCCGTCAACCCCACTAAAAATAGCAGCTCC
TTTGGTACTAGCAGCAATTAAGGAGGCTGTTTTATAGTAGCTCTTGATTA
AATATTCTTCAAGTTCGAGGTCGCAATCAAACAAGC
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