CX044214

Overview
NameCX044214
Unique NameCX044214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 364.385 bits (934), Expect = 4.759e-100
Identity = 178/219 (81.28%), Postives = 190/219 (86.76%), Query Frame = 2
Query:   98 MGQQSLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 754
            M QQSLIYSFVARGTVIL E+T+F GNFT IAAQCLQKLPSSNNKFTYNCDGHTFNYLV++GFTYCVVAV+S GRQ+P+AFLERVKEDF KRYGGGKAATA AN LNKEFG KLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR QGTQMRRKMWFQNM                   S+CGGFNC
Sbjct:    1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFNC 219          
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 1.385e-99
Identity = 176/221 (79.64%), Postives = 191/221 (86.43%), Query Frame = 2
Query:   92 RKMGQQSLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 754
            R MGQQ+LIYSFVARGTVIL EYTEF GNFT +AAQCLQKLPSSNNKFTYNCDGHTFNYLV++GFTYCVVAVESVGRQ+P+AFLERVKEDF KRYGGGKA TA AN LN+EFG KLKEHMQYC+DHP+EISKLAKVKAQV+EVKGVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR QGT++RRKMWF+NM                   SVCGGF C
Sbjct:   64 RTMGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGFKC 284          
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 356.681 bits (914), Expect = 9.923e-98
Identity = 173/219 (79.00%), Postives = 187/219 (85.39%), Query Frame = 2
Query:   98 MGQQSLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 754
            MGQQSLIYSFVARGTVILAEYTEF GNFT +AAQCLQKLPSSNNKFTYNCDGHTFNYL D+GFTYCVV +ES GRQ+P+AFLERVKEDF KRYGGGKA+TA AN LNKEFG KLKEHMQYC DHPEEISKL+KVKAQV+EVKGVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR QGT+M+RK+WF+NM                   SVC GF C
Sbjct:    1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGFKC 219          
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 2.211e-97
Identity = 175/219 (79.91%), Postives = 186/219 (84.93%), Query Frame = 2
Query:   98 MGQQSLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 754
            M QQSLIYSFVARGTVIL E+T+F GNFT IAAQCLQKLPSSNNKFTYNCDGHTFNYLV+DGFTYCVVAV+S GRQ+P++FLERVKEDF KRYGGGKAATA AN LNKEFG KLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR  GTQMRRKMW QNM                   SVC GF C
Sbjct:    1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGFKC 219          
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 308.145 bits (788), Expect = 4.047e-83
Identity = 147/220 (66.82%), Postives = 176/220 (80.00%), Query Frame = 2
Query:   98 MGQQSLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNN-KFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 754
            MGQ+S IYSFVARGT+ILAEYTEFTGNF  IAAQCLQKLPSS+N KFTYNCD HTFN+LV+DG+ YCVVA +S+ +Q+ IAFLERVK DF KRYGGGKA+TA+A  LNKEFGP +KEHM Y +DH EEI KL KVKAQVSEVK +M++NI+K +DRGE + +L D+TENLRSQAQ++++QGTQ+RRK+W+QNM                   SVC GFNC
Sbjct:    1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFNC 220          
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 7.393e-77
Identity = 145/219 (66.21%), Postives = 164/219 (74.89%), Query Frame = 2
Query:   98 MGQQSLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 754
            M QQSL YSF+ARGTVIL E+T+F GNFT +AAQ L+ LPSSNNKFTYNCDGHTFN LV++GFTYCVVAV+S GR++P+AFLERVKEDF KRYGG KAAT  AN LNKEFG  LKEHMQYC+DHP+EIS LAK KAQVSEVK +MM+NIEKVL RG   E+L     +  SQ Q F  + TQM+RK WFQNM                   SVCGGFNC
Sbjct:    1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNC 215          
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.198e-72
Identity = 135/238 (56.72%), Postives = 168/238 (70.59%), Query Frame = 2
Query:   98 MGQQSLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAAT-------------------AVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 754
            M Q+ LIYSFVA+GTV+LAE+T ++GNF+ IA QCLQKLP++++K+TY+CDGHTFN+LVD+GF + VVA ES GR VP  FLERVKEDF KRY                          +VA  L++EFGP LKEHMQYC+ HPEE+SKL+K+KAQ++EVKG+MMDNIEKVLDRGEKIELLVD+TENL+ QA  F++QG Q+RRKMW Q++                     CGGF C
Sbjct:    1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKC 238          
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.660e-34
Identity = 72/188 (38.30%), Postives = 124/188 (65.96%), Query Frame = 2
Query:  110 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNK-FTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQN 670
            +++Y+ VARGTV+L+E+T  + N + IA Q L+K+P  N+   +Y+ D + F+    DG T   +A E+ GR++P AFLE + + F++ YG     TA+A  +N+EF   L + + Y  + P    ++ ++K ++++V+GVM++NI+KVLDRGE++ELLVD+T N++     FR+Q  + R  +W++N
Sbjct:    2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRN 187          
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.841e-33
Identity = 72/190 (37.89%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  110 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPS--SNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNM 673
            ++I++ VARGTV+L+E++  + N + I+ Q L+KLP   S++  +Y+ D + F+    DG T   +A E+ GR +P AFL+ + + F+K YG     +A A  +N EF   L + M++  + P    +++++K ++S+V+ VM++NI+KVLDRGE++ELLVD+TEN++     FR+Q  + R  MW++N+
Sbjct:    2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNV 189          
BLAST of CX044214 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.017e-33
Identity = 74/214 (34.58%), Postives = 126/214 (58.88%), Query Frame = 2
Query:  110 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPS--SNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGG 745
            +++Y+ VARGTV+LAE++  TGN   +  + L+KL    S+ +  ++ D + F+ L  DG T+  +A ++ GR+VP ++LE +   F+K YG   A  A A  +N EF   L + M++   +P  +  L +V+ +VSE++ VM++NIEK+++RG++IELLVD+T  ++  +  FR+Q  ++RR +W +N                    S CGG
Sbjct:    2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLLTCLIVFLLYIIIASFCGG 213          
The following BLAST results are available for this feature:
BLAST of CX044214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
VA722_ARATH4.759e-10081.28Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA725_ARATH1.385e-9979.64Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA726_ARATH9.923e-9879.00Putative vesicle-associated membrane protein 726 O... [more]
VA721_ARATH2.211e-9779.91Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA724_ARATH4.047e-8366.82Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA723_ARATH7.393e-7766.21Vesicle-associated membrane protein 723 OS=Arabido... [more]
VA727_ARATH4.198e-7256.72Vesicle-associated membrane protein 727 OS=Arabido... [more]
VA711_ARATH2.660e-3438.30Vesicle-associated membrane protein 711 OS=Arabido... [more]
VA713_ARATH3.841e-3337.89Vesicle-associated membrane protein 713 OS=Arabido... [more]
VA714_ARATH5.017e-3334.58Vesicle-associated membrane protein 714 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_16B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-16B05-C10-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044214 ID=CX044214; Name=CX044214; organism=Citrus sinensis; type=EST; length=868bp
CTCCCTCTCTCTCTCTTCGTTCTTCTCTCTCTCTCAGGATTAGGGTTTGT
TCTTGTTGTTGTGGTCGTATTAGTAGTAGTTGTTTTTTATCAGAAAAATG
GGACAGCAATCGTTGATCTACAGCTTCGTGGCTCGAGGAACGGTGATACT
AGCTGAGTACACGGAGTTCACCGGAAACTTCACCGGCATAGCTGCTCAGT
GTCTCCAGAAACTTCCTTCTAGTAACAACAAGTTCACTTACAATTGCGAC
GGCCACACTTTTAACTACCTTGTTGATGACGGCTTCACTTACTGTGTGGT
TGCAGTTGAATCTGTTGGTCGACAGGTTCCAATTGCCTTCCTTGAGCGTG
TGAAAGAGGATTTTATAAAGAGATATGGTGGAGGAAAAGCTGCAACAGCA
GTCGCTAACGGCTTGAACAAGGAGTTTGGGCCCAAATTGAAGGAGCATAT
GCAGTACTGCATCGATCATCCAGAGGAGATCAGCAAGCTTGCTAAAGTGA
AGGCGCAGGTGTCAGAAGTCAAAGGTGTTATGATGGATAACATAGAGAAG
GTTCTTGATCGTGGAGAGAAAATTGAGCTTCTGGTGGATAGAACAGAGAA
TCTTCGTTCACAGGCGCAGGATTTCAGACAGCAGGGAACCCAGATGAGGA
GAAAGATGTGGTTTCAGAACATGAAGATAAAACTGATTGTTCTGGGAATC
ATAATTGCCTTGATTCTCATCATAGTATTATCTGTATGCGGTGGCTTCAA
TTGTTGATGATACTTCGTACTCTATTAGTATTGTTGCTGCTTGTCAACTG
TTTCTTGATGTGTTTACTCGTAATTTTGTCCGTTCTCACAAGACCAATGC
TTGTATAGTCTGTATTTT
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