CX044144
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.688e-78 Identity = 139/193 (72.02%), Postives = 165/193 (85.49%), Query Frame = 3 Query: 18 WLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSDMLDDPYAMKNAAVPIA 596 W++KLLN+CS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLDVGDR++AEKVSYFF++PEVSDIVIF+APPIL E G+S DVFIKRIVA+ GD VEV GKLLVN Q EDF+LEP+ YEM+P+ VPEGYVFVLGDNRN SFDSHNWGPLPI+NI+GRSVFRYWPPS+VSD++ + AV ++ Sbjct: 175 WVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDIIHHEQVSQKRAVDVS 367
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP1 PE=2 SV=2) HSP 1 Score: 289.271 bits (739), Expect = 1.867e-77 Identity = 139/196 (70.92%), Postives = 166/196 (84.69%), Query Frame = 3 Query: 18 WLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL---QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSDMLDDPYAMKNAAVPIA 596 W++KLL+VCS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLD GDR++AEKVSYFF++PEVSDIVIF+APPIL E G+SS DVFIKRIVA+ GD VEV GKL VN + Q+EDF+LEP++YEM+P+ VP+GYVFVLGDNRN SFDSHNWGPLPIENIVGRSVFRYWPPS+VSD + A+ V ++ Sbjct: 145 WVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKVSDTIYHDQAITRGPVAVS 340
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: PLSP1_ARATH (Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2) HSP 1 Score: 249.21 bits (635), Expect = 2.141e-65 Identity = 115/171 (67.25%), Postives = 142/171 (83.04%), Query Frame = 3 Query: 33 LNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVS 545 L+ SDDA+ F A+ VS F+ F+AEPR IPS SM PT DVGDR++AEKVSY+F++P +DIVIF++PP+LQE+G++ DVFIKRIVA GD VEVH GKL+VNGVA++E FILEP YEM P+ VPE VFV+GDNRNNS+DSH WGPLP++NI+GRSVFRYWPP+RVS Sbjct: 108 LDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRVS 278
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: LEP1_SYNY3 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803) GN=lepB1 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.192e-41 Identity = 81/156 (51.92%), Postives = 109/156 (69.87%), Query Frame = 3 Query: 72 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 539 AL ++ L + F+AEPR IPS SM PTL+ GDR++ EKVSY F P+V DI++F P +LQ G+ G FIKR++A G VEV+ G + +G E++ILEP Y + V VP+G VFV+GDNRNNS DSH WG LP +NI+G ++FR++P SR Sbjct: 23 ALVLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNNSNDSHVWGFLPQQNIIGHALFRFFPASR 178
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: LEP2_SYNY3 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803) GN=lepB2 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.088e-36 Identity = 78/168 (46.43%), Postives = 105/168 (62.50%), Query Frame = 3 Query: 57 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSDMLDD 560 K TA+ ++ ++F+AE R IPS+SM PTL + DR++ EK+SY + PE +IV+F L+ F D FIKRI+ GD V V G + VNG DE++I P AYE PV VP+ VLGDNRNNS+DSH WG +P E ++GR+ R+WP RV + DD Sbjct: 26 KTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNFH--DAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRVGLLTDD 191
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: LEP_PHOLA (Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.935e-36 Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 3 Query: 96 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSDMLDDP 563 ++F+AE R IPS SM PTL+V DR++ EK+SY F P DI++F L++ S + FIKR++ G+ V+V GG++L+NG +E++I P Y+ P VP VLGDNRNNS+DSH WG +P +NI+GR+V R+WP +R+ ++ P Sbjct: 46 RTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHPTEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVPADSFLVLGDNRNNSYDSHFWGYVPRQNIIGRAVVRFWPVNRLGELGPPP 201
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: LEP_MYCTU (Probable signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.104e-20 Identity = 71/213 (33.33%), Postives = 99/213 (46.48%), Query Frame = 3 Query: 54 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLD-----VGDRILAEKVSYFFKRPEVSDIVIFRAPP---------------------ILQEIGFSSGDV--FIKRIVATAGDCVEVHGGK-LLVNGVAQDEDFI------LEPLAY-----EMDPVVVPEGYVFVLGDNRNNSFDSHNWGPL-----------PIENIVGRSVFRYWPPSR 539 A A A+ + ++ +F+A P IPS SM PTL VGDRI+ +K+SY F P+ D+++FR PP L IGF D +KR++A G V+ L VNG E ++ +P Y E PV VP G V+V+GDNR +S DS PL P+ N++G++ WPPSR Sbjct: 69 AVLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGDVIVFRGPPSWNVGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGRPLKEPYLDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSRAHCPLLCTDDPLPGTVPVANVIGKARLIVWPPSR 281
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: LEP_MYCLE (Probable signal peptidase I OS=Mycobacterium leprae GN=lepB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 67/217 (30.88%), Postives = 99/217 (45.62%), Query Frame = 3 Query: 63 AFTALTVSFLFKSFLAEPRSIPSASMNPTLD-----VGDRILAEKVSYFFKRPEVSDIVIFRAPP---------------------ILQEIGFSSGDV--FIKRIVATAGDCVEVHGGK-LLVNG----------VAQDEDFILEP-LAYEMDPVVVPEGYVFVLGDNRNNSFDSH------------------NWGPLPIENIVGRSVFRYWPPSR 539 A A+ + ++ +F+A P IPS SM PTL VGDRI+ +K++Y F P+ D+++F+ PP L +GF D +KR++A G V+ L VNG V + D P L E PV VP+G ++V+GDNR +S DS N G +P+ N++G++ WPPSR Sbjct: 60 AVIAIGLYYVMLTFVARPYLIPSESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPSWNTMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGKPLKEPYLRPVTMNADLSFSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSRYHCNSTDVVNGLSCTGDPNSGTVPVSNVIGKARVVVWPPSR 276
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: LEP_PSEFL (Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 70/219 (31.96%), Postives = 100/219 (45.66%), Query Frame = 3 Query: 57 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEV------------SDIVIFRAPPILQEIGFSSGDV-FIKRIVATAGDCVEVHGGK-LLVNGVAQDEDFI----------------LEPLAYEMDPVV------------VPEGYVFVLGDNRNNSFDSHNW----------GPLPIENIVGR--SVFRYWPPSRVSDM 551 K+ F L + + +SFL EP IPS SM PTLDVGD IL K SY + P + D+++FR P S +V +IKR+V GD V K L +NG + E + L + +E+ + VP G+ F++GDNR+NS DS W G +P ENIVG+ +V+ WP ++S + Sbjct: 64 KSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDVGDFILVNKFSYGIRLPVIDKKVIEVGDPQRGDVMVFRYP--------SDPNVNYIKRVVGLPGDVVRYTSDKRLFINGESVAEKLLGAEPNTLGSAELYQEKLGAVEHEIRKEMSRYRAMPDGQWKVPAGHYFMMGDNRDNSNDSRYWDDPNIPKDLLGMVPDENIVGKAFAVWMSWPEPKLSHL 274
BLAST of CX044144 vs. ExPASy Swiss-Prot
Match: LEP_STAAC (Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 9.121e-16 Identity = 53/171 (30.99%), Postives = 79/171 (46.20%), Query Frame = 3 Query: 72 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------------------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWP 530 A + F+ F+ P +I SM+PTL G+R+ V Y E ++V+F A + D ++KR++ GD VE L VNG QDE ++ L ++ V+P+G VLGDNR S DS +G + + IVG+ FR+WP Sbjct: 15 AFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHA---------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176 The following BLAST results are available for this feature:
BLAST of CX044144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044144 ID=CX044144; Name=CX044144; organism=Citrus sinensis; type=EST; length=849bpback to top |