CX044130

Overview
NameCX044130
Unique NameCX044130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3621 contig Csv1_Contig3621:203..1060. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.433e-34
Identity = 97/228 (42.54%), Postives = 121/228 (53.07%), Query Frame = -3
Query:  203 VSFESGLKGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHEHKLNHH-SDNHQ--------KGSGINSEYLDNKEIASPFSFPTSSLGCMKSNDYCFSSLMLDENNFLGGFSSSFIPPAAAESNFYYISQNQMNFGDVHNLQQSESELPELQSANNSVANSPILNLDFSID-AAELDSNFP 856
            +S E GL+GP +D +SWRKYGQKDILGAK+PRSYYRCT+RNTQ CWATKQVQRSD DP+ FEVTYRGTHTC   SQ +P    PEK E K  H  + N+Q        +  G+ SE          FSFP +      S  Y + S+        GG              FY+           H      S+   L S N S  +SPI +++F  D  AE+++ FP
Sbjct:  130 ISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSDGDPTIFEVTYRGTHTC---SQGIP---LPEKRETKPKHTVAVNYQNLRASLTVRTGGLGSE---------AFSFPVT------SPLYTYESIN-------GG------------GTFYH-----------HVGSSGPSDFTGLISTNTSTGSSPIFDVNFQFDPTAEINTGFP 306          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.242e-32
Identity = 62/88 (70.45%), Postives = 71/88 (80.68%), Query Frame = -3
Query:  593 VSFESGLKGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHE 856
            +S E GL+GP +D +SWRKYGQKDILGAK+PRSYYRCT+R+TQNCWATKQVQRSD D + FEVTYRGTHTC       P  ASPEK +
Sbjct:  147 ISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQ 234          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.842e-23
Identity = 62/184 (33.70%), Postives = 95/184 (51.63%), Query Frame = -3
Query:  296 SGLKGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHEHKLNHHSDNHQKGSGINSEYLDNKEIASPFSFPTSSLGCMKSNDYCFSSLMLDEN-NFLGGFSSSFIPPAAAESNFYYISQNQMNFGDVHNLQQSESELP 844
            +G+    +DG+SWRKYGQKDILGAK+PR YYRCTYR +Q C ATKQVQRSDE+    E++YRG H+C   +             ++   H +       +++ Y     +     +P SS   +++N+  +   M D+N  + G  S+SF        N+ + +    +    H+   S S +P
Sbjct:  106 AGVDRTLDDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRGIHSCSQAANVGTTMPIQNLEPNQTQEHGNLDMVKESVDN-YNHQAHLHHNLHYPLSSTPNLENNN-AYMLQMRDQNIEYFG--STSFSSDLGTSINYNFPASGSAS----HSASNSPSTVP 281          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.932e-21
Identity = 42/75 (56.00%), Postives = 58/75 (77.33%), Query Frame = -3
Query:  605 PFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASP 829
            P +D ++WRKYGQK+ILG+++PR+YYRCT++   NC A KQVQR ++DP TF VTYRG+HTC+N +      A+P
Sbjct:  171 PPDDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTCYNSTAPTASSATP 245          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.643e-20
Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = -3
Query:  638 GPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFN 832
            G  +DG+ WRKYGQK+I G+K PR+YYRCT+R TQ+C A KQVQ+SD DPS FEV Y G HTC N
Sbjct:  101 GSIDDGHCWRKYGQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCNN 165          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.214e-20
Identity = 62/176 (35.23%), Postives = 90/176 (51.14%), Query Frame = -3
Query:  302 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHEHKLNHHSDNHQKGSGINSEYLDNKEIASPFSFPTSSLGCMKSNDYCFSSLMLDENNFLGGF--SSSFIPPAAAESNFYYISQNQMNFGDVHNLQQSESE 823
            ED +SWRKYGQK+IL AK+PRSY+RCT++ TQ C ATKQVQ+ + +P  F +TY G HTC N +   P+  + + H+       D+       + +  DN         P    G    ND    SL+  E  F   +   +S++    + S     SQ+ M FG   + + SE+E
Sbjct:  120 EDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIGNHTC-NTNAETPKSKTCDHHDEIFMDSEDHKSPSLSTSMKEEDN---------PHRHHGSSTENDL---SLVWPEMVFEEDYHHQASYVNGKTSTSIDVLGSQDLMVFGGGGDFEFSENE 282          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK54_ARATH (Probable WRKY transcription factor 54 OS=Arabidopsis thaliana GN=WRKY54 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.692e-17
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = -3
Query:  626 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQS 823
            ED Y+WRKYGQK+IL   +PRSY RCT++ TQ C ATKQVQ+ D+D   F++TY G HTC    Q+
Sbjct:  152 EDRYAWRKYGQKEILNTTFPRSYLRCTHKPTQGCKATKQVQKQDQDSEMFQITYIGYHTCTANDQT 217          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK63_ARATH (Probable WRKY transcription factor 63 OS=Arabidopsis thaliana GN=WRKY63 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.987e-14
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = -3
Query:  644 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTC 823
            +DG++WRKYGQK I  + Y R YYRC Y   QNC+ATK+VQ   + P  +  TY G HTC
Sbjct:  103 DDGFTWRKYGQKTIKTSLYQRCYYRCAYAKDQNCYATKRVQMIQDSPPVYRTTYLGQHTC 162          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.987e-14
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = -3
Query:  650 DGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 820
            D ++WRKYGQKDILG+++PR YYRC Y+ T  C ATKQVQRS+ D +   +TY   H
Sbjct: 1209 DLWTWRKYGQKDILGSRFPRGYYRCAYKFTHGCKATKQVQRSETDSNMLAITYLSEH 1265          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK67_ARATH (Probable WRKY transcription factor 67 OS=Arabidopsis thaliana GN=WRKY67 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.135e-13
Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = -3
Query:  602 DGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTC--------------FNGSQSVPQPASPE 820
            DG++WRKYGQK I  + + R YYRCTY   QNC ATK+VQ+  ++P  +  TY G H C                  Q VP+P  P+
Sbjct:  109 DGFTWRKYGQKTIKASAHKRCYYRCTYAKDQNCNATKRVQKIKDNPPVYRTTYLGKHVCKAFAVHDDTYSSTMIRFDQVVPEPIMPQ 195          
The following BLAST results are available for this feature:
BLAST of CX044130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
WRK41_ARATH4.433e-3442.54Probable WRKY transcription factor 41 OS=Arabidops... [more]
WRK53_ARATH9.242e-3270.45Probable WRKY transcription factor 53 OS=Arabidops... [more]
WRK30_ARATH7.842e-2333.70Probable WRKY transcription factor 30 OS=Arabidops... [more]
WRK55_ARATH1.932e-2156.00WRKY transcription factor 55 OS=Arabidopsis thalia... [more]
WRK46_ARATH3.643e-2066.15Probable WRKY transcription factor 46 OS=Arabidops... [more]
WRK70_ARATH6.214e-2035.23Probable WRKY transcription factor 70 OS=Arabidops... [more]
WRK54_ARATH1.692e-1757.58Probable WRKY transcription factor 54 OS=Arabidops... [more]
WRK63_ARATH2.987e-1453.33Probable WRKY transcription factor 63 OS=Arabidops... [more]
WRK52_ARATH2.987e-1457.89Probable WRKY transcription factor 52 OS=Arabidops... [more]
WRK67_ARATH1.135e-1341.38Probable WRKY transcription factor 67 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_15F01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15F01-K1-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044130 ID=CX044130; Name=CX044130; organism=Citrus sinensis; type=EST; length=858bp
TTTTTTTTTGCAAATCAAGTTTATTATAACTGCTTCTCATAGACAAAGTG
GAAACTAACAAGTGATACTGAGACTAGTTTATATCTCTTAGCCACCAGAA
AGAAGGCTCTTATGTTTCTAAATTATCTGTTCTTCTATTACATATTACAA
ACCAGGATAAAGCAATGAAATAGAATTAGAATGAGAATCCTGCATTGTCA
AATGGGAAGTTTGAATCGAGTTCTGCCGCATCAATGGAGAAATCCAAGTT
CAAAATTGGAGAATTGGCGACTGAATTATTGGCTGATTGTAGCTCAGGGA
GTTCAGATTCTGATTGCTGCAGATTATGAACATCTCCAAAGTTCATCTGG
TTTTGTGAAATGTAATAAAAGTTTGATTCCGCTGCTGCAGGAGGTATAAA
CGATGAGGAGAAACCACCCAAGAAATTATTCTCGTCAAGCATCAAAGATG
AAAAGCAATAGTCATTGCTCTTCATGCATCCAAGTGATGATGTCGGAAAA
GAGAAAGGAGATGCAATTTCCTTATTGTCCAAATACTCACTATTGATACC
TGAGCCTTTTTGATGATTGTCGCTATGGTGGTTTAGTTTGTGTTCATGTT
TTTCTGGCGATGCTGGTTGTGGAACCGATTGGCTGCCATTGAAACAAGTG
TGTGTTCCTCTGTATGTGACCTCAAAAGTGGAGGGGTCTTCATCTGATCT
TTGCACTTGCTTTGTCGCCCAACAATTTTGTGTATTTCTGTAGGTGCATC
TGTAATAGCTTCTGGGATATTTGGCTCCGAGGATATCTTTCTGGCCATAT
TTTCTCCAGCTATAGCCATCTTCAAAGGGTCCTTTCAGGCCACTCTCAAA
ACTGACCT
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