CX044129

Overview
NameCX044129
Unique NameCX044129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3621 contig Csv1_Contig3621:1..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.164e-48
Identity = 102/175 (58.29%), Postives = 121/175 (69.14%), Query Frame = 1
Query:    1 ILSSYEKALLILNWSGSMG-----------QAQASGVPPESPISINGSPRSEDF-DGA-------LKDNQDSSKKRKTLPRRTDKVKVSFESGLEGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHE 468
            I+SSYE++LL+LNWS S                  G  PESP SINGSPRSE+F DG         +D   +SKKRK LP+ ++KV++S E GLEGP +D +SWRKYGQKDILGAK+PRSYYRCT+R+TQNCWATKQVQRSD D + FEVTYRGTHTC       P  ASPEK +
Sbjct:   60 IVSSYERSLLLLNWSSSPSVQLIPTPVTVVPVANPGSVPESPASINGSPRSEEFADGGGSSESHHRQDYIFNSKKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQ 234          
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 7.544e-48
Identity = 130/306 (42.48%), Postives = 166/306 (54.25%), Query Frame = 1
Query:    1 ILSSYEKALLILNWSGSMGQAQASGVP---------PESPISINGSPRSEDFDGAL-KDNQDSSKKRKTLPRRTDKVKVSFESGLEGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHEHKLNHH-SDNHQ--------KGSGINSEYLDNKEIASPFSFPTSSLGCMKSNDYCFSSLMLDENNFLGGFSSSFIPPAAAESNFYYISQNQMNFGDVHNLQQSESELPELQSANNSVANSPILNLDFSID-AAELDSNFP 858
            I+SS++KA+L+LN S +         P         P SP SI G+PRSE+F     K+   SSKKRK LP+ T++V++S E GLEGP +D +SWRKYGQKDILGAK+PRSYYRCT+RNTQ CWATKQVQRSD DP+ FEVTYRGTHTC   SQ +P    PEK E K  H  + N+Q        +  G+ SE          FSFP +      S  Y + S+        GG              FY+           H      S+   L S N S  +SPI +++F  D  AE+++ FP
Sbjct:   52 IVSSFKKAILMLNGSTTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLPKWTEQVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSDGDPTIFEVTYRGTHTC---SQGIP---LPEKRETKPKHTVAVNYQNLRASLTVRTGGLGSE---------AFSFPVT------SPLYTYESIN-------GG------------GTFYH-----------HVGSSGPSDFTGLISTNTSTGSSPIFDVNFQFDPTAEINTGFP 306          
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.019e-33
Identity = 85/256 (33.20%), Postives = 134/256 (52.34%), Query Frame = 1
Query:    1 ILSSYEKALLILNWSGSMGQAQASGVPPESPISINGSPRSEDFDGALKDNQDSSKKRKTLPRRTDKVKVSFESGLEGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHEHKLNHHSDNHQKGSGINSEYLDNKEIASPFSFPTSSLGCMKSNDYCFSSLMLDEN-NFLGGFSSSFIPPAAAESNFYYISQNQMNFGDVHNLQQSESELP 765
            IL SY K+L I+N+SG + Q    G          GSP+S+D D   ++       +K++PR + KV+++  +G++   +DG+SWRKYGQKDILGAK+PR YYRCTYR +Q C ATKQVQRSDE+    E++YRG H+C   +             ++   H +       +++ Y     +     +P SS   +++N+  +   M D+N  + G  S+SF        N+ + +    +    H+   S S +P
Sbjct:   47 ILQSYHKSLTIMNYSGELDQVSQGG----------GSPKSDDSD---QEPLVIKSSKKSMPRWSSKVRIAPGAGVDRTLDDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRGIHSCSQAANVGTTMPIQNLEPNQTQEHGNLDMVKESVDN-YNHQAHLHHNLHYPLSSTPNLENNN-AYMLQMRDQNIEYFG--STSFSSDLGTSINYNFPASGSAS----HSASNSPSTVP 281          
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.384e-25
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 1
Query:  115 RSEDFDGALKDNQDSSKKRKTLPRRTDKVKVSFESGLE-GPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFN 423
            RS + DG  KD+++  KKRK   + T+KVKV   +  E G  +DG+ WRKYGQK+I G+K PR+YYRCT+R TQ+C A KQVQ+SD DPS FEV Y G HTC N
Sbjct:   64 RSLEIDG--KDSKNVFKKRKVSEKNTEKVKVFVATEQENGSIDDGHCWRKYGQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCNN 165          
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.168e-22
Identity = 76/231 (32.90%), Postives = 112/231 (48.48%), Query Frame = 1
Query:   97 SINGSPRSE-DFDGALKDNQDSSK-------KRKTLPRRTDKVKVSFESGLEGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHEHKLNHHSDNHQKGSGINSEYLDNKEIASPFSFPTSSLGCMKSNDYCFSSLMLDENNFLGGF--SSSFIPPAAAESNFYYISQNQMNFGDVHNLQQSESE 759
            ++ GS  +  D DG  +D+ DS K       KR    R+      + ES +    ED +SWRKYGQK+IL AK+PRSY+RCT++ TQ C ATKQVQ+ + +P  F +TY G HTC N +   P+  + + H+       D+       + +  DN         P    G    ND    SL+  E  F   +   +S++    + S     SQ+ M FG   + + SE+E
Sbjct:   68 AVEGSQNASCDNDGKFEDSGDSRKRLGPVKGKRGCYKRKKRSETCTIESTI---LEDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIGNHTC-NTNAETPKSKTCDHHDEIFMDSEDHKSPSLSTSMKEEDN---------PHRHHGSSTENDL---SLVWPEMVFEEDYHHQASYVNGKTSTSIDVLGSQDLMVFGGGGDFEFSENE 282          
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 42/75 (56.00%), Postives = 58/75 (77.33%), Query Frame = 1
Query:  232 PFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASP 456
            P +D ++WRKYGQK+ILG+++PR+YYRCT++   NC A KQVQR ++DP TF VTYRG+HTC+N +      A+P
Sbjct:  171 PPDDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTCYNSTAPTASSATP 245          
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK54_ARATH (Probable WRKY transcription factor 54 OS=Arabidopsis thaliana GN=WRKY54 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.796e-18
Identity = 53/133 (39.85%), Postives = 70/133 (52.63%), Query Frame = 1
Query:   37 NWSGSMGQAQASGVPPESPISINGSPRSEDFDGALKDNQDSSKKRKTLPRRTDKVKVSFESGLEGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQS 435
            +W+ S G   A+      P+S NG    E     L   +    KR    R+T       E+      ED Y+WRKYGQK+IL   +PRSY RCT++ TQ C ATKQVQ+ D+D   F++TY G HTC    Q+
Sbjct:   97 SWNASCGDDSAT------PVSCNGGDSGESKKKRLGVGKG---KRGCYTRKTRSHARIVEAKSS---EDRYAWRKYGQKEILNTTFPRSYLRCTHKPTQGCKATKQVQKQDQDSEMFQITYIGYHTCTANDQT 217          
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK63_ARATH (Probable WRKY transcription factor 63 OS=Arabidopsis thaliana GN=WRKY63 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.299e-15
Identity = 39/88 (44.32%), Postives = 51/88 (57.95%), Query Frame = 1
Query:  178 LPRRTDKVKVSFESGLE--------GPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTC 417
            +P+R+ K K+    GLE           +DG++WRKYGQK I  + Y R YYRC Y   QNC+ATK+VQ   + P  +  TY G HTC
Sbjct:   75 VPQRSSKKKICGVKGLEIYRDDSPNPRLDDGFTWRKYGQKTIKTSLYQRCYYRCAYAKDQNCYATKRVQMIQDSPPVYRTTYLGQHTC 162          
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.299e-15
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 1
Query:  124 DFDGALKDN-QDSSKKRKTLPRRTDKVKVSFESGLEGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 411
            D + ++ +N  D  KK+K       K  VS  +  EG   D ++WRKYGQKDILG+++PR YYRC Y+ T  C ATKQVQRS+ D +   +TY   H
Sbjct: 1172 DCESSMTENLSDVPKKKKKHSESRVKKVVSIPAIDEG---DLWTWRKYGQKDILGSRFPRGYYRCAYKFTHGCKATKQVQRSETDSNMLAITYLSEH 1265          
BLAST of CX044129 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15
Identity = 47/114 (41.23%), Postives = 61/114 (53.51%), Query Frame = 1
Query:   91 PISINGSP-------RSEDFDGALKDNQDSSKKRKTLPRRTDKVKVSFESGLEGPFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 411
            P S N +P       +S   D    D+   SK+RK   +++ +  VS  S      EDG+ WRKYGQK + G  YPRSYYRCT   + NC A K V+R+ +DP  F  TY G H
Sbjct:  294 PRSTNSNPGTSDSGCKSSQCDEGELDDPSRSKRRKN-EKQSSEAGVSQGSVESDSLEDGFRWRKYGQKVVGGNAYPRSYYRCT---SANCRARKHVERASDDPRAFITTYEGKH 403          
The following BLAST results are available for this feature:
BLAST of CX044129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
WRK53_ARATH1.164e-4858.29Probable WRKY transcription factor 53 OS=Arabidops... [more]
WRK41_ARATH7.544e-4842.48Probable WRKY transcription factor 41 OS=Arabidops... [more]
WRK30_ARATH4.019e-3333.20Probable WRKY transcription factor 30 OS=Arabidops... [more]
WRK46_ARATH1.384e-2556.73Probable WRKY transcription factor 46 OS=Arabidops... [more]
WRK70_ARATH4.168e-2232.90Probable WRKY transcription factor 70 OS=Arabidops... [more]
WRK55_ARATH2.069e-2156.00WRKY transcription factor 55 OS=Arabidopsis thalia... [more]
WRK54_ARATH2.796e-1839.85Probable WRKY transcription factor 54 OS=Arabidops... [more]
WRK63_ARATH1.299e-1544.32Probable WRKY transcription factor 63 OS=Arabidops... [more]
WRK52_ARATH1.299e-1545.36Probable WRKY transcription factor 52 OS=Arabidops... [more]
WRK44_ARATH8.419e-1541.23WRKY transcription factor 44 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_15F01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15F01-K1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044129 ID=CX044129; Name=CX044129; organism=Citrus sinensis; type=EST; length=891bp
ATATTGTCTTCATATGAGAAAGCTCTTTTGATTCTGAATTGGAGTGGCTC
AATGGGACAGGCGCAAGCTAGTGGTGTACCGCCAGAGTCCCCAATATCCA
TCAATGGGAGCCCTCGAAGTGAGGATTTTGATGGGGCTTTGAAGGATAAT
CAAGATAGCTCAAAGAAGAGGAAGACTTTGCCAAGGAGGACGGATAAAGT
GAAGGTCAGTTTTGAGAGTGGCCTTGAAGGACCCTTTGAAGATGGCTATA
GCTGGAGAAAATATGGCCAGAAAGATATCCTCGGAGCCAAATATCCCAGA
AGCTATTACAGATGCACCTACAGAAATACACAAAATTGTTGGGCGACAAA
GCAAGTGCAAAGATCAGATGAAGACCCCTCCACTTTTGAGGTCACATACA
GAGGAACACACACTTGTTTCAATGGCAGCCAATCGGTTCCACAACCAGCA
TCGCCAGAAAAACATGAACACAAACTAAACCACCATAGCGACAATCATCA
AAAAGGCTCAGGTATCAATAGTGAGTATTTGGACAATAAGGAAATTGCAT
CTCCTTTCTCTTTTCCGACATCATCACTTGGATGCATGAAGAGCAATGAC
TATTGCTTTTCATCTTTGATGCTTGACGAGAATAATTTCTTGGGTGGTTT
CTCCTCATCGTTTATACCTCCTGCAGCAGCGGAATCAAACTTTTATTACA
TTTCACAAAACCAGATGAACTTTGGAGATGTTCATAATCTGCAGCAATCA
GAATCTGAACTCCCTGAGCTACAATCAGCCAATAATTCAGTCGCCAATTC
TCCAATTTTGAACTTGGATTTCTCCATTGATGCGGCAGAACTCGATTCAA
ACTTCCCATTTGACAATGCAGGATTCTCATTCTAATTCTAT
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