CX044104

Overview
NameCX044104
Unique NameCX044104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.611e-31
Identity = 72/219 (32.88%), Postives = 122/219 (55.71%), Query Frame = -3
Query:  288 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCS-----------ITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 908
            H NL  L G CC +G G+  L+Y+FV N +L + L     ++  L+W TR  +  G+A+G++YLH + R  +VH ++ A  VL+ ++ NP +SD GL KL  +D      + +   GY+APEY   G  T+K+D+Y+FG++  +I+ G+ +           +  +     E + + + +DP L  +++  EA  + QIA+ CT   P  RPS+  V++
Sbjct:  677 HPNLVKLYG-CCVEG-GQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVK 893          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.521e-30
Identity = 72/219 (32.88%), Postives = 118/219 (53.88%), Query Frame = -3
Query:  291 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV------------EDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 908
            H+NL  L G C         L+YDFV NGNL Q +  + G    L W  R+++I G+AKG++YLH G  P +VH ++ +  +L+ R++N  +SD GL KLL  +  +   +     GY+APEY  TG   EKSDIY+FG+++ +I++G+  +  ++R   E++ V            E+ +DP +    S      +  +AL C     + RP + +++
Sbjct:  207 HKNLVRLLGYCVEGAYR--MLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPV-DYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHII 422          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.725e-29
Identity = 78/221 (35.29%), Postives = 124/221 (56.11%), Query Frame = -3
Query:  291 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV---LEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCS-----------ITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 908
            H NL  L G CC +G+ E  L+Y+++ N +L + L    G+EK    L+W+TR  +  GIAKG++YLH + R  +VH ++ A  VL+    N  +SD GL KL  D+      + +  +GY+APEY   G  T+K+D+Y+FG++  +I+SGK +           +  +     E   + + +DP+L   FS  EA  +  IAL CT+ SP+ RP + +V+
Sbjct:  722 HPNLVKLYG-CCIEGK-ELLLVYEYLENNSLARAL---FGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVV 937          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.171e-29
Identity = 76/219 (34.70%), Postives = 117/219 (53.42%), Query Frame = -3
Query:  288 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK-----------CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 908
            H  L +LRG C S       L+YD++P G+L + L  E G +  L+W +R+++I G AKG+SYLH    P ++H ++ +  +L+       +SD GL KLL D+        +   GYLAPEY  +GR TEK+D+Y+FG++V ++LSGK            ++  + +      +  D +DPN EG   +     L  IA  C   SP  RP++  V+Q
Sbjct:  359 HRYLVNLRGYCNSPTSK--LLLYDYLPGGSLDEALH-ERGEQ--LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEG-MQMESLDALLSIATQCVSPSPEERPTMHRVVQ 571          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.060e-29
Identity = 78/223 (34.98%), Postives = 125/223 (56.05%), Query Frame = -3
Query:  288 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP-GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE----------SSKVEDFIDPNLEGKF-----SVSEASNLGQIALHCTHESPSHRPSIENVMQ 908
            H+NL  L G  CS    E  L+Y++VPN +L Q L  E+ S KVL W+ R+++I G A+G++YLHG  P  ++H ++    VL+  + NP ++D GL +    D        +  +GY+APEY   G+ TEK+D+Y+FG++V +I  G   I  F  +              +++ + +DP L+ +F     S +EA  + ++ L CT  SPS RPS+E V++
Sbjct:  368 HKNLVKLLG--CSIEGPESLLVYEYVPNKSLDQFLFDESQS-KVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACG-TRINAFVPETGHLLQRVWNLYTLNRLVEALDPCLKDEFLQVQGSEAEACKVLRVGLLCTQASPSLRPSMEEVIR 586          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.053e-28
Identity = 78/221 (35.29%), Postives = 124/221 (56.11%), Query Frame = -3
Query:  291 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV---LEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCS-----------ITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 908
            H NL  L G CC +G+ E  L+Y+++ N +L + L    G+EK    L+W+TR  V  GIAKG++YLH + R  +VH ++ A  VL+    N  +SD GL KL  ++      + +  +GY+APEY   G  T+K+D+Y+FG++  +I+SGK +           +  +     E   + + +DP+L   FS  EA  +  IAL CT+ SP+ RP + +V+
Sbjct:  720 HPNLVKLYG-CCIEGK-ELLLVYEYLENNSLARAL---FGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVV 935          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.911e-28
Identity = 73/219 (33.33%), Postives = 119/219 (54.34%), Query Frame = -3
Query:  291 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCS-----------ITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 908
            H NL  L G CC +G  +  L+Y+++ N  L + L   +  S   L+W+TR  +  GIAKG+++LH + R  +VH ++ A  VL+ +  N  +SD GL KL  D       + +  +GY+APEY   G  TEK+D+Y+FG++  +I+SGK +           +  +     E   + + +DP L   +S  EA  +  +AL CT+ SP+ RP++  V+
Sbjct:  731 HPNLVKLYG-CCVEGN-QLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVV 947          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.386e-27
Identity = 72/223 (32.29%), Postives = 118/223 (52.91%), Query Frame = -3
Query:  291 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN-LEGKF--------------SVSEASNLGQIALHCTHESPSHRPSIENVM 908
            H NL  L G C  K   E  L+Y+FVPN +L  H   +    +VL W  R ++I+G+A+G+ YLH   +  ++H +L A  +L+    NP ++D G+ +L   D+      +     GY+APEY T G+F+ KSD+Y+FG+++ +++SGK +      +  E  ++  F+    +EG+F              S++E   L  I L C  E  S RPSI +++
Sbjct:  398 HRNLVKLLGFCNEKD--EEILVYEFVPNSSL-DHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDPLAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSIL 617          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.287e-26
Identity = 69/216 (31.94%), Postives = 119/216 (55.09%), Query Frame = -3
Query:  291 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK---------CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 908
            H+NL  L G  CS    +  L+Y++V N +L Q L ++  +  +L W  R ++I GI++G+ YLH G    ++H ++    +L+ R  +P ++D GL + +  D   +    +  +GYLAPEY   G+ TEK+D+YAFG+++ +I++GK          S+     +  +++ ++  IDP L+G F   EA  + QI L C   S   RPS+  ++
Sbjct:  371 HKNLVRLLG--CSIEGPKSLLVYEYVHNRSLDQILFMK-NTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIV 583          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.195e-26
Identity = 66/222 (29.73%), Postives = 121/222 (54.50%), Query Frame = -3
Query:  285 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG--LVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD-IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK-----------CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 908
            HENL  L G C      +  L+Y F+ NG+LL  L  EA   K+L+W TR+S+  G A+G++YLH   PG  ++H ++ +  +L+ +     ++D G  K    +   +  L+     GYL PEY  T + +EKSD+++FG+++ +I+SG+            S+  + +    +SKV++ +DP ++G +       + ++AL C     ++RP + ++++E
Sbjct:  649 HENLVPLLGYC--NEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLH-TFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRE 867          
The following BLAST results are available for this feature:
BLAST of CX044104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
Y1534_ARATH8.611e-3132.88Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH9.521e-3032.88Probable serine/threonine-protein kinase At1g01540... [more]
Y5343_ARATH4.725e-2935.29Probable LRR receptor-like serine/threonine-protei... [more]
FEI1_ARATH6.171e-2934.70LRR receptor-like serine/threonine-protein kinase ... [more]
CRK42_ARATH8.060e-2934.98Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y5344_ARATH1.053e-2835.29Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH8.911e-2833.33Probable LRR receptor-like serine/threonine-protei... [more]
CRK37_ARATH3.386e-2732.29Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK1_ARATH1.287e-2631.94Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
NORK_MEDTR2.195e-2629.73Nodulation receptor kinase OS=Medicago truncatula ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_15D07_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15D07-G13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044104 ID=CX044104; Name=CX044104; organism=Citrus sinensis; type=EST; length=910bp
CGAACTTTTGAACCACATAAAAGTTAATAAGTCGTTCTGGCGAGAAGCCA
ACTTGTTACATCGCTAAACTTCAATTACTATTAACTAAAGGGTTTACATT
AAAGGCCCACCAGGTTCCAAGAATAGATTACACCACTCCAAGTTCATGAT
TTCACAGCTTCAGTCCTCGGGTAAAGGACAGTACAAATAAGCATTAGGGG
GTGATTGATCCATCTTGCCTCTTGGAGCTGAAAAATGAGGCAAAACCTCA
GTCAAAGTTATGAACTGCCAATAATACTGCTCAATTCCTGCATCACGTTT
TCTATGGATGGCCTGTGGCTAGGAGATTCATGGGTGCAATGTAGAGCAAT
TTGCCCGAGGTTAGATGCCTCAGACACTGAAAACTTTCCTTCAAGATTTG
GGTCGATGAAATCTTCAACCTTAGATGACTCTGCTGCCTGGCGAGTGAAT
GGGGTGATACTACATTTTCCACTCAGAATCTGGAATACAATCATTCCAAA
TGCATATATGTCACTCTTTTCTGTGAATCGCCCAGTGGTGGTGTATTCAG
GAGCCAGATATCCCATGGCAGCACTGGCTTTGAGCATTGAGAAAACAATA
TCATCTGCAAGGAGTTTGTGCAGGCCAGAATCTGAAAGCAAGGGATTATA
TCGTCTATGAATGAGCACCTTCTCAGCAGACAAATTCGGGTGAACTAGAC
CAGGTCTCTTTCCATGTAAATAACTGATCCCTTTGGCAATTCCCTTTATG
ACAGAAATTCTGGTAGCCCATTCAAGAACCTTTTCACTGCCTGCCTCTAA
ATCAAGATGCTGTAAGAGGTTTCCATTGGGGACAAAATCATAGATGAGAA
AACACTCACCTCTGCCTTTTGAACAGCAGATACCTCTCAAGCTGGCAAGA
TTTTCATGTT
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