CX044102

Overview
NameCX044102
Unique NameCX044102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length406
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX044102 vs. ExPASy Swiss-Prot
Match: Y38K_CORSE (Uncharacterized 38.1 kDa protein OS=Corydalis sempervirens PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 6.324e-50
Identity = 90/133 (67.67%), Postives = 115/133 (86.47%), Query Frame = -1 
Query:    2 VQMAAVRRSKARAERNYEQADALHQKIINAGYRVINLPNNEEVLARKYRIRLRGIDAPESSMPYGKEAQNELIKIVQGKCLRVLVYGEDRYGRCVADLYCNGIFVQEVMLKKGCAWHYSAYDQRSELAKWEKE 400
            V++AA  R+KARA R+Y +ADAL + I++AGYRV++ PNNE++LARKYRIRLRGID+PESSMP+GKEA+ ELIK+V GKCL V +Y EDRYGR V D+YCNG F+QE MLKKG AWHY+AYD+R +L+KWE++
Sbjct:  178 VKVAAQERAKARAVRDYVKADALQKNIVDAGYRVLSGPNNEDILARKYRIRLRGIDSPESSMPFGKEAKEELIKLVVGKCLTVHIYEEDRYGRSVGDIYCNGQFIQEKMLKKGLAWHYTAYDKRPQLSKWEEK 310
The following BLAST results are available for this feature:
BLAST of CX044102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y38K_CORSE6.324e-5067.67Uncharacterized 38.1 kDa protein OS=Corydalis semp... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_15D06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15D06-G11-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044102 ID=CX044102; Name=CX044102; organism=Citrus sinensis; type=EST; length=406bp
CCTCTTTTTCCCATTTTGCAAGTTCTGAGCGTTGGTCATAGGCAGAGTAA
TGCCATGCACAGCCTTTCTTGAGCATCACTTCCTGTACAAATATGCCATT
GCAATACAAATCTGCTACGCAGCGACCATAACGATCCTCACCATAGACTA
GGACTCTCAAACACTTTCCTTGAACAATCTTAATCAGTTCATTCTGTGCT
TCTTTCCCATATGGCATTGAACTCTCTGGTGCATCTATGCCTCTTAGTCG
AATTCGATACTTTCGTGCTAGAACTTCCTCGTTGTTTGGAAGATTTATCA
CCCGGTATCCAGCATTGATGATTTTCTGGTGAAGTGCATCTGCTTGTTCA
TAGTTTCTCTCAGCTCGTGCTTTTGATCTTCGAACAGCAGCCATTTGTAC
GTCTCC
back to top