CX044060

Overview
NameCX044060
Unique NameCX044060
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7653 contig Csv1_Contig7653:35..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX044060 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 78/270 (28.89%), Postives = 118/270 (43.70%), Query Frame = 3
Query:    3 MIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESSG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSIYAAYSGETLVK--VIEKPINLSDIIPTPVYVGFTAATGDFLESHEVINWTFNS 758
            + F+ L  + L   +SS       +SF+F +F  D  D   LI  G   I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LS+ ++Y      +   +   ++L   +P  V VGF+ +TG ++++H +++WTFNS
Sbjct:   20 LAFITLFLMLLNRVNSS-----DSLSFTFDNFRPDQRD---LILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272          
BLAST of CX044060 vs. ExPASy Swiss-Prot
Match: LEC_ERYCG (Lectin OS=Erythrina crista-galli PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 70/241 (29.05%), Postives = 103/241 (42.74%), Query Frame = 3
Query:   75 ISFSFPSFAKDSCDNKTLICYGAIESSGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIK----ISRHQNYT-DRAGDGMTFIFASDKNGPSAKGVGEYLGL--QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLD--VDLKSGRAIQVRIYYNPDFGQLSIYAAYSGETLVKVIEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 758
            ISFSF  F   + DN TL     I  SG L +T      +P     GR LY KP+ +  S   T  + +     S  Q YT     DG+ F     K+ P A+G G YLG+   S   + +  LAVE DT  N                  + N + S+      L +G+   V I Y+     L +   Y     +  I + +++  ++P  V VG + ATG   D  E+H+V +W+F +
Sbjct:    4 ISFSFSEFEPGN-DNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKP-AQGYG-YLGVFNNSKQDNSYQTLAVEFDTFSNP------WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQA 235          
BLAST of CX044060 vs. ExPASy Swiss-Prot
Match: LEC2_CYTSC (2-acetamido-2-deoxy-D-galactose-binding seed lectin 2 OS=Cytisus scoparius PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 71/245 (28.98%), Postives = 102/245 (41.63%), Query Frame = 3
Query:   75 ISFSFPSFAKDSCDNKTLICYGAIESSGALSITPGPPPNLPIRKVGRVLYGKPLSL-------QRSFIDTTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGL---QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDVDLKSGRAIQVRIYYNPDFGQLSIYAAY-SGETLVK---VIEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 758
            +SFSF  F  D   N  L     I  +G L +T           +GR LY  P+ +       + SF  T  +  IS   N +  A DG+ F  A     P +   G YLGL    SS       +AVE DT  N                  +S  V+S      K+G    V I Y P    L     Y SG+T  K   +I   ++L   +P  V +GF+A TG   +++E+H++++W+F S
Sbjct:    4 LSFSFTKFKTDQ-KNLILQRDALITPTGKLQLTTVENGKPAAYSLGRALYSTPIHIWDKSTGDEASFA-TFFSFVISDAPNPSTAATDGLAFFLAPADTQPQS--AGGYLGLFEKDSSYNSSNQIVAVEFDTYYNSAWDPQTNPHIGIDVNTIKSKKVSSW---GFKNGNVATVLITYQPSSKSLVASLVYPSGQTSDKTSYIISANVDLKATVPEWVRIGFSATTGQTDNYIETHDILSWSFKS 241          
BLAST of CX044060 vs. ExPASy Swiss-Prot
Match: LECS_SOPJA (Seed lectin OS=Sophora japonica PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 67/242 (27.69%), Postives = 102/242 (42.15%), Query Frame = 3
Query:   75 ISFSFPSFAKDSCDNKTLICYG--AIESSGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIKISRH----QNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPG--DKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDVDL--KSGRAIQVRIYYNPDFGQLSIYAAYSGETLVKVIEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 758
            +SFSFP FA +  D   L+  G   + S G L +T      +PI    GR LY  P+ +         +   S           ++ DG+ F  A   N     G G +LGL  S G    +  +AV+ DT +N                  + N +NS   V    ++G    V I Y      L++   Y       ++   ++L  I+P  V VGFTAATG    ++E+H+V++W+F S
Sbjct:   41 LSFSFPKFASNQED---LLLQGDALVSSKGELQLTT-VENGVPIWNSTGRALYYAPVHIWDKSTGRVASFATSFSFVVKAPVASKSADGIAFFLAPPNNQIQGPG-GGHLGLFHSSGYNSSYQIIAVDFDTHINA-------WDPNTRHIGIDVNSINSTKTVTWGWQNGEVANVLISYQAATETLTVSLTYPSSQTSYILSAAVDLKSILPEWVRVGFTAATGLTTQYVETHDVLSWSFTS 270          
BLAST of CX044060 vs. ExPASy Swiss-Prot
Match: LEC_BOWMI (Lectin OS=Bowringia mildbraedii PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 68/240 (28.33%), Postives = 107/240 (44.58%), Query Frame = 3
Query:   75 ISFSFPSFAKDSCDNKTLICYG--AIESSGALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSF-----IDTTITIKISRHQNYTDRAGDGMTFIFAS-DKNGPSAKGVGEYLGL---QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDVDLKSGRAIQVRIYYNPDFGQLSIYAAYSGETLVKVIEKPINLSDIIPTPVYVGFTAATGDFLESHEVINWTFNS 758
            + F+F  F     D   LI  G  ++ S+ AL +T       P    VGR LY  P+ L +S       +TT T  IS+  +    A   +TF  AS D   PS  G G  LGL    ++ G     +AVE DT  N ++                S   +     D ++G+     I YN    +LS+ ++Y   + V V+   + L+++ P  V VGF+A TG + +++ ++ W+F S
Sbjct:    4 VCFTFTDFESGQQD---LIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQSSSLVASFETTFTFSISQGSSTPAAA---LTFFIASPDTKIPSGSG-GRLLGLFGSSNNAGSDNGVVAVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASKW---DWQNGKTATAHISYNSASKRLSVVSSYPNSSPV-VVSFDVELNNVGPPDVRVGFSATTGQYTQTNNILAWSFRS 232          
The following BLAST results are available for this feature:
BLAST of CX044060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LEC2_CLALU4.262e-1328.89Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
LEC_ERYCG1.791e-1129.05Lectin OS=Erythrina crista-galli PE=1 SV=1[more]
LEC2_CYTSC2.339e-1128.982-acetamido-2-deoxy-D-galactose-binding seed lecti... [more]
LECS_SOPJA3.989e-1127.69Seed lectin OS=Sophora japonica PE=2 SV=1[more]
LEC_BOWMI8.887e-1128.33Lectin OS=Bowringia mildbraedii PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_15B02_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15B02-C3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044060 ID=CX044060; Name=CX044060; organism=Citrus sinensis; type=EST; length=852bp
AAATGATTTTCCTACTACTCCTCTCAGTTTTTCTTCGCGGAGCTTCTTCA
TCAATCCTTTCCGAAGACACACCTATTAGCTTCTCATTTCCCTCATTCGC
CAAAGACAGTTGTGACAATAAGACCCTCATTTGCTACGGAGCGATTGAAA
GTTCCGGCGCCTTAAGCATCACACCAGGCCCTCCACCAAACCTGCCGATC
AGAAAGGTTGGACGGGTTTTATACGGCAAGCCTCTGAGTTTACAGCGATC
TTTTATTGATACCACCATCACCATTAAGATCTCACGCCATCAGAATTACA
CTGATCGTGCCGGAGATGGCATGACGTTCATTTTTGCAAGCGATAAAAAC
GGTCCATCAGCAAAGGGCGTCGGCGAATATCTTGGACTGCAGTCTTCACC
AGGCGATAAATTTCCTCCATTAGCCGTGGAGCTGGACACATGCCTGAACA
AGAACCTGAATGATCCAGATGATAACCATATTGGCATCGACATAAACGGA
ATCGAATCAAATCCAGTTAATAGTCTGCTTGACGTTGATCTCAAAAGTGG
ACGAGCAATCCAGGTTCGAATTTATTACAATCCAGACTTTGGACAACTCT
CTATTTATGCGGCATATTCGGGGGAAACACTTGTGAAGGTGATTGAAAAA
CCCATTAACCTGTCAGATATAATTCCAACGCCCGTCTATGTTGGATTCAC
AGCAGCTACGGGGGACTTTTTAGAAAGCCATGAGGTTATAAATTGGACCT
TCAACTCGTTCCCAGTGCCGCCTTCTCTCAAGGAGAAAAACCTGGTGATG
CCAATATAATTCTAAACCGTCCTTGAAAAACCATGTCACATAAATTATAA
TC
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