CX043960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: SMT3_ARATH (Ubiquitin-like protein SMT3 OS=Arabidopsis thaliana GN=SMT3 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.683e-36 Identity = 75/89 (84.27%), Postives = 78/89 (87.64%), Query Frame = -3 Query: 195 QEEDKKPNDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGG 449 QEEDKKP D AHIN K DGNEVFFRIKRSTQLKKLMNAYCDRQ V++NSIAFLFDGRR R EQTPDEL+MEDGDEIDAMLHQTGG Sbjct: 5 QEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGG 93
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: SMT3_ORYSJ (Ubiquitin-like protein SMT3 OS=Oryza sativa subsp. japonica GN=SMT3 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.511e-34 Identity = 75/93 (80.65%), Postives = 78/93 (83.87%), Query Frame = -3 Query: 189 EEDKKP---NDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGGML 446 EEDKKP AHIN K DGNEVFFRIKRSTQLKKLMNAYCDRQ V++N+IAFLFDGRR RGEQTPDELEMEDGDEIDAMLHQTGG L Sbjct: 6 EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCL 98
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: PMT3_SCHPO (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe GN=pmt3 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20 Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = -3 Query: 195 SVRDEAEERMSGVTNTPQEEDKKPNDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGG 500 ++ D + ++ T ++D KP+ + HIN K D NEVFF+IK++T+ KLM YC RQ +NS+ FL DG R R +QTP EL+MEDGD+I+A+L Q GG Sbjct: 8 NISDADKSAITPTTGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: SUMO3_XENTR (Small ubiquitin-related modifier 3 OS=Xenopus tropicalis GN=sumo3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 46/91 (50.55%), Postives = 54/91 (59.34%), Query Frame = -3 Query: 192 PQEEDKKPNDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGGM 452 P+E K ND HIN K DG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: SUMO3_XENLA (Small ubiquitin-related modifier 3 OS=Xenopus laevis GN=sumo3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 46/91 (50.55%), Postives = 54/91 (59.34%), Query Frame = -3 Query: 192 PQEEDKKPNDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGGM 452 P+E K ND HIN K DG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: SUMO3_CHICK (Small ubiquitin-related modifier 3 OS=Gallus gallus GN=SUMO3 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 45/91 (49.45%), Postives = 54/91 (59.34%), Query Frame = -3 Query: 192 PQEEDKKPNDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGGM 452 P+E K ND HIN K DG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINEADTPAQLEMEDEDTIDVFQQQTGGL 93
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: SUMO3_HUMAN (Small ubiquitin-related modifier 3 OS=Homo sapiens GN=SUMO3 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 45/91 (49.45%), Postives = 54/91 (59.34%), Query Frame = -3 Query: 192 PQEEDKKPNDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGGM 452 P+E K ND HIN K DG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: SUMO3_RAT (Small ubiquitin-related modifier 3 OS=Rattus norvegicus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14 Identity = 45/90 (50.00%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 195 PQEEDKKPNDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGG 452 P+E K ND HIN K DG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ TP +LEMED D ID QTGG Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: SUMO3_MOUSE (Small ubiquitin-related modifier 3 OS=Mus musculus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14 Identity = 45/90 (50.00%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 195 PQEEDKKPNDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGG 452 P+E K ND HIN K DG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ TP +LEMED D ID QTGG Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CX043960 vs. ExPASy Swiss-Prot
Match: SUMO3_DANRE (Small ubiquitin-related modifier 3 OS=Danio rerio GN=sumo3 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14 Identity = 45/90 (50.00%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 195 PQEEDKKPNDQSAHINFK----DGNEVFFRIKRSTQLKKLMNAYCDRQFVELNSIAFLFDGRRFRGEQTPDELEMEDGDEIDAMLHQTGG 452 P+E K ND HIN K DG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ TP +LEMED D ID QTGG Sbjct: 6 PREGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92 The following BLAST results are available for this feature:
BLAST of CX043960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043960 ID=CX043960; Name=CX043960; organism=Citrus sinensis; type=EST; length=718bpback to top |