CX043956

Overview
NameCX043956
Unique NameCX043956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C90A1_ARATH (Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 5.576e-89
Identity = 156/184 (84.78%), Postives = 167/184 (90.76%), Query Frame = -1
Query:  242 IMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTRTQKRYPIIVQRRN 793
            IMTLAVKFLTETPLALAQLKEEH++IRA KS    LEW+DYKSMPFTQCVVNETLRVANII GVFRRAMTD+ IKGY IPKGW+VF+SFRAVHLD +HFKDAR+FNPWRWQ+NS  T P NVFTPFGGGPRLCPGYELARV LSVFLH LVT FSWVPAEQDKLVFFPTTRTQKRYPI V+RR+
Sbjct:  286 IMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGVFRRAMTDVEIKGYKIPKGWKVFSSFRAVHLDPNHFKDARTFNPWRWQSNSVTTGPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTGFSWVPAEQDKLVFFPTTRTQKRYPIFVKRRD 469          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C90C1_ARATH (Cytochrome P450 90C1 OS=Arabidopsis thaliana GN=ROT3 PE=2 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 2.614e-54
Identity = 101/189 (53.44%), Postives = 142/189 (75.13%), Query Frame = -1
Query:  227 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQ-EPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTRTQKRYPIIVQRRNEN*KP 790
            MTLAVKFL++ P+ALA+L EE+ E++ +K +  E  +W DY S+ FTQ V+NETLR+ANII+GV+R+A+ D+ IKGY IPKGW V ASF +VH+D D + +   F+PWRW   +G+ +    FTPFGGG RLCPG EL+++E+S+FLHHLVTR+SW  AE+D++V FPT + ++R PI V   +++  P
Sbjct:  331 MTLAVKFLSDNPVALAKLVEENMEMKRRKLELGEEYKWTDYMSLSFTQNVINETLRMANIINGVWRKALKDVEIKGYLIPKGWCVLASFISVHMDEDIYDNPYQFDPWRWDRINGSANSSICFTPFGGGQRLCPGLELSKLEISIFLHHLVTRYSWT-AEEDEIVSFPTVKMKRRLPIRVATVDDSASP 518          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C90D2_ORYSJ (Cytochrome P450 90D2 OS=Oryza sativa subsp. japonica GN=CYP90D2 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.871e-51
Identity = 97/187 (51.87%), Postives = 132/187 (70.59%), Query Frame = -1
Query:  236 IMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQ-EPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTRTQKRYPIIVQRRNEN 793
            ++TLAVKFL+E PLAL QL+EE+ +++ +K+   E L+W DY S+ FTQ V+ ETLR+ NII G+ R+A+ D+ +KG+ IPKGW VF  FR+VHLD   + +   FNPWRW+    +      FTPFGGG RLCPG +LAR+E S+FLHHLVT F WV AE+D +V FPT R ++  PI V  + ++
Sbjct:  307 LITLAVKFLSECPLALHQLEEENIQLKRRKTDMGETLQWTDYMSLSFTQHVITETLRLGNIIGGIMRKAVRDVEVKGHLIPKGWCVFVYFRSVHLDDTLYDEPYKFNPWRWKEKDMSNGS---FTPFGGGQRLCPGLDLARLEASIFLHHLVTSFRWV-AEEDHIVNFPTVRLKRGMPIRVTAKEDD 489          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C72B1_PINTA (Abietadienol/abietadienal oxidase OS=Pinus taeda GN=CYP720B1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.536e-46
Identity = 90/182 (49.45%), Postives = 115/182 (63.19%), Query Frame = -1
Query:  245 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTRTQKRYPIIVQRR 790
            MT A+KFLT  P AL Q+KEEHD I   K   + LEW+DYKSM FTQCV+NETLR+ N   GVFR    D  +K   IPKGW VFA   A HLD     +A +FNPWRW+ +   ++  ++F+PFGGG RLCPG  LAR+EL++FLH  +TRF W     +   +FP     K +P+ +  R
Sbjct:  300 MTFAIKFLTTCPKALTQMKEEHDAILKAKGGHKKLEWDDYKSMKFTQCVINETLRLGNFGPGVFRETKEDTKVKDCLIPKGWVVFAFLTATHLDEKFHNEALTFNPWRWELDQDVSNN-HLFSPFGGGARLCPGSHLARLELALFLHIFITRFRWEALADEHPSYFPLPYLAKGFPMRLYNR 480          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C90B1_ARATH (Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CYP90B1 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.878e-44
Identity = 93/192 (48.44%), Postives = 121/192 (63.02%), Query Frame = -1
Query:  248 MTLAVKFLTETPLALAQLKEEHDEI-RAKKSKQEP-LEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSP--------VNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTRTQKRYPIIVQR 790
            + LA+ FL   P A+ +L+EEH EI RAKK   E  L W+DYK M FTQCV+NETLR+ N++  + R+A+ D+  KGY IP GW+V     AVHLD+  +     FNPWRW Q N+GA+S          N + PFGGGPRLC G ELA++E++VF+HHLV +F+W  AE D+   FP        PI V R
Sbjct:  320 IALAIFFLQACPKAVEELREEHLEIARAKKELGESELNWDDYKKMDFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVISAVHLDNSRYDQPNLFNPWRWQQQNNGASSSGSGSFSTWGNNYMPFGGGPRLCAGSELAKLEMAVFIHHLVLKFNWELAEDDQPFAFPFVDFPNGLPIRVSR 511          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C72B2_PINTA (Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.889e-43
Identity = 86/187 (45.99%), Postives = 116/187 (62.03%), Query Frame = -1
Query:  245 MTLAVKFLTETPLALAQLKEEHDEIRAKKS--KQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKG-YTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVN--VFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTRTQKRYPIIVQRR 790
            M+ A+KFLT+ P AL +LK EHD +  +K   K + L W+DY+S+ FTQCV++ETLRV N   GVFR    DI  KG + IP+GW V+      HLD  +   A  F+PWRWQ +      +    F PFGGG RLCPG  LA++EL++FLH+ VT+F W   + DK+ +FP  R  K  PI ++ R
Sbjct:  300 MSFAIKFLTDCPRALEELKAEHDALLKRKGNLKNQKLNWDDYQSLKFTQCVIHETLRVGNFGPGVFRETKEDIKTKGGFVIPRGWTVYVFLTGTHLDEKYHSSALKFDPWRWQPHLQDQELLKNPSFMPFGGGARLCPGMHLAKMELALFLHNFVTKFRWEALQDDKISYFPFPRLIKGLPIRLRLR 486          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C85A3_SOLLC (Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CYP85A3 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.292e-39
Identity = 75/165 (45.45%), Postives = 110/165 (66.67%), Query Frame = -1
Query:  290 LAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFP 784
            +AVK+L + P AL ++++EH  IR KKS ++P+++ND+K+M FT+ V+ ETLR+A I++GV R+   D+ + GY IPKGWR++   R ++ D   + D  +FNPWRW  N+      + F  FGGG RLCPG EL   E+S FLH+ VTR+ W     +KL+ FP
Sbjct:  290 MAVKYLHDHPKALEEIRKEHFAIREKKSLEDPIDYNDFKAMRFTRAVIYETLRLATIVNGVLRKTTQDMELNGYMIPKGWRIYVYTRELNYDPLIYPDPYTFNPWRWLENN--LDHQSSFLMFGGGTRLCPGKELGVAEISTFLHYFVTRYRWEEVGGNKLMKFP 452          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C85A1_SOLLC (Cytochrome P450 85A1 OS=Solanum lycopersicum GN=CYP85A1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.911e-39
Identity = 76/165 (46.06%), Postives = 106/165 (64.24%), Query Frame = -1
Query:  290 LAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFP 784
            +AVK+L + P  L +L++EH  IR KK  ++P+++NDY+SM FT+ V+ ET R+A I++GV R+   D+ I GY IPKGWR++   R ++ D   + D  SFNPWRW + S      N F  FGGG R CPG EL   E+S FLH+ VT++ W     DKL+ FP
Sbjct:  287 MAVKYLHDHPKVLEELRKEHMAIREKKKPEDPIDYNDYRSMRFTRAVILETSRLATIVNGVLRKTTQDMEINGYIIPKGWRIYVYTRELNYDPRLYPDPYSFNPWRWMDKS--LEHQNSFLVFGGGTRQCPGKELGVAEISTFLHYFVTKYRWEEIGGDKLMKFP 449          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C85A1_ORYSJ (Cytochrome P450 85A1 OS=Oryza sativa subsp. japonica GN=CYP85A1 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.179e-38
Identity = 72/178 (40.45%), Postives = 113/178 (63.48%), Query Frame = -1
Query:  251 LAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTRTQKRYPIIVQ 784
            +AVK+L++ P AL QL++EH +IR  K+ ++ ++WND+KSM FT+ V+ ETLR+A +++G+ R+   D+ + GY IPKGWR++   R ++ D   + D  +FNPWRW   +  + P   F  FGGG R+CPG E+  VE++ FLH+ VT++ W     + ++ FP         I VQ
Sbjct:  292 MAVKYLSDHPKALEQLRKEHFDIRKGKAPEDAIDWNDFKSMTFTRAVIFETLRLATVVNGLLRKTTQDVEMNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLEKNMESHP--HFMLFGGGSRMCPGKEVGTVEIATFLHYFVTQYRWEEEGNNTILKFPRVEAPNGLHIRVQ 467          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C85A2_ARATH (Cytochrome P450 85A2 OS=Arabidopsis thaliana GN=CYP85A2 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.702e-37
Identity = 76/173 (43.93%), Postives = 105/173 (60.69%), Query Frame = -1
Query:  266 LAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTRTQKRY 784
            +A+K+L + P AL +L+ EH  IR +K   EPL  +D KSM FT+ V+ ET R+A I++GV R+   D+ + GY IPKGWR++   R ++ D   ++D   FNPWRW   S      + F  FGGG RLCPG EL   E+S FLH+ VT++ W    +DKL+ FP     K Y
Sbjct:  288 MALKYLHDHPKALEELRREHLAIRERKRPDEPLTLDDIKSMKFTRAVIFETSRLATIVNGVLRKTTHDLELNGYLIPKGWRIYVYTREINYDTSLYEDPMIFNPWRWMEKS--LESKSYFLLFGGGVRLCPGKELGISEVSSFLHYFVTKYRWEENGEDKLMVFPRVSAPKGY 458          
The following BLAST results are available for this feature:
BLAST of CX043956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
C90A1_ARATH5.576e-8984.78Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CY... [more]
C90C1_ARATH2.614e-5453.44Cytochrome P450 90C1 OS=Arabidopsis thaliana GN=RO... [more]
C90D2_ORYSJ7.871e-5151.87Cytochrome P450 90D2 OS=Oryza sativa subsp. japoni... [more]
C72B1_PINTA1.536e-4649.45Abietadienol/abietadienal oxidase OS=Pinus taeda G... [more]
C90B1_ARATH1.878e-4448.44Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CY... [more]
C72B2_PINTA7.889e-4345.99Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 P... [more]
C85A3_SOLLC5.292e-3945.45Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CY... [more]
C85A1_SOLLC6.911e-3946.06Cytochrome P450 85A1 OS=Solanum lycopersicum GN=CY... [more]
C85A1_ORYSJ1.179e-3840.45Cytochrome P450 85A1 OS=Oryza sativa subsp. japoni... [more]
C85A2_ARATH1.702e-3743.93Cytochrome P450 85A2 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_14E05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E05-J10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043956 ID=CX043956; Name=CX043956; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTCACAAAAAGGAAATAAAATGATTACTATTAATC
ATTACTACAGCAGCTTGATTAAAACATATGAACATGATAATTTACATAAA
CTATTCTGCTAACATAAAATTTATTAAATTTGACATAAATAGTTGATTAC
ATTAGATGATACATCATCTCCTCTAGCATTCTCTTACTCCATCCTTCCTT
GCTTGCTTCTCTCTTTATTCTTTACATGGCTTTTAATTCTCATTTCGACG
CTGCACAATGATGGGGTACCTCTTCTGCGTTCTTGTTGTTGGAAAGAATA
CCAACTTATCTTGCTCAGCTGGTACCCAGCTGAAACGAGTAACTAAGTGG
TGAAGAAAAACAGAGAGCTCAACCCTCGCAAGTTCATATCCAGGGCACAG
CCGTGGCCCACCGCCGAACGGAGTGAATACATTTACTGGACTCGTTGCTC
CTGAATTATTCTGCCATCTCCATGGGTTGAAAGAGCGAGCATCTTTGAAA
TGGTCATGGTCTAAATGTACAGCCCTGAATGATGCAAAAACTCTCCACCC
CTTTGGTATAGTGTAACCTTTAATGTTGATATCTGTCATTGCTCTCCTGA
AAACCCCACTGATTATGTTGGCCACTCTCAGAGTTTCATTGACAACACAT
TGAGTGAATGGCATTGACTTATAATCATTCCATTCGAGAGGCTCTTGCTT
GCTCTTCTTTGCCCTTATCTCATCATGCTCCTCCTTTAGTTGAGCCAAAG
CTAGAGGAGTCTCAGTGAGGAACTTAACAGCAAGAGTCATGAT
back to top