DC900472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900472 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.885e-39 Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 3 Query: 3 ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIXRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVA 242 ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMI RTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVA Sbjct: 198 ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVA 277
BLAST of DC900472 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.583e-37 Identity = 76/80 (95.00%), Postives = 76/80 (95.00%), Query Frame = 3 Query: 3 ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIXRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVA 242 ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMI RTSNNRKL EETSTVDGWPAWLS GDRRLLQSSSVTPN VVA Sbjct: 198 ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVA 277
BLAST of DC900472 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.628e-21 Identity = 54/84 (64.29%), Postives = 61/84 (72.62%), Query Frame = 3 Query: 3 ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTD----MMIXRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVA 242 A+K VR L GQ HVEKMCSNALAMI NMTDTD M + +NNRKL+E+ WP WLS GDRRLLQSS+VTP+VVVA Sbjct: 196 ADKKVRKVLLKGQKHVEKMCSNALAMICNMTDTDIANEMKLSAPANNRKLVEDNGE---WPEWLSAGDRRLLQSSTVTPDVVVA 276
BLAST of DC900472 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 7.388e-19 Identity = 56/99 (56.57%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 3 ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIXR-----TSNNRKLIEE----TSTVD----------GWPAWLSTGDRRLLQSSSVTPNVVVA 242 A+K VR AL GQ+HVE MCSNALAMIKNMTDTD+ TSNNRKL EE T VD GWP WLS GDRRLLQ S V + VA Sbjct: 187 ADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSGVKADATVA 285
BLAST of DC900472 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.808e-18 Identity = 50/91 (54.95%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 3 ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDM---------MIXRTSNNRKLIEETSTV--DGWPAWLSTGDRRLLQSSSVTPNVVVA 242 A++ VR AL GQVHVE MCSNALAMIKNMT+TD+ +NNRKL E T + DGWP WLS GDRRLLQ S++ + VA Sbjct: 190 ADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGSTIKADATVA 280 The following BLAST results are available for this feature:
BLAST of DC900472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900472 ID=DC900472; Name=DC900472; organism=Citrus sinensis; type=EST; length=253bpback to top |