CX043914

Overview
NameCX043914
Unique NameCX043914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043914 vs. ExPASy Swiss-Prot
Match: Y1457_ARATH (Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.873e-79
Identity = 147/284 (51.76%), Postives = 199/284 (70.07%), Query Frame = 2
Query:   11 KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSSIPLLELIPGQIXXXXXXXXXXXXGDPLKMAMDNVAKRLSLQPTIQDLSQDLVAISSYLPVLAD---ILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLL 853
            KS+KDYF  A++++K+   GGPPRWFSP++CG    D+P LLFLPG+DG G+GL+  H+ LGK F + CLHIPV DRT F GL+K+VE  +R E    P +P+YLVG+S G C+ALAVAARN  +DLVLILVNPATSF++S LQ  +P+LE++P ++            GDP+KMA   +  +L     I+ L Q L    + LP+L++   I+P+ETLLWK++LL++  AYANSR+HAV+A++LVL SGKD ++PSQEE +RL   L  C  R F  +GH LL
Sbjct:   90 KSVKDYFAAAKEILKAD--GGPPRWFSPVDCGRPVEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVEDVLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLPILEMVPEELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLT--KTMLPLLSELGGIIPRETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGLLKNCSVRCFKDNGHTLL 369          
BLAST of CX043914 vs. ExPASy Swiss-Prot
Match: Y3684_ARATH (Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 6.289e-73
Identity = 142/286 (49.65%), Postives = 192/286 (67.13%), Query Frame = 2
Query:   11 KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSSIPLLELIPGQI--XXXXXXXXXXXXGDPLKMAMDNVAKRLSLQ---PTIQDLSQDLVAISSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLL 853
            K L D+ +EA + +    GGGPPRWFSPLECG+   +SPLLL+LPGIDG GLGLIR H++LG+IFDIWCLHIPV DRT    LVKL+E TV+SE+ R P RP+YLVGES+GAC+AL VAARNP+IDL LILVNPAT  N  ++Q    +L ++P  +              GDPL   +D ++   S+Q        + +D++A+S+ LP L+ + PK+TLLWK+E+LK A A  NS +++V+A+ L+L SG+D  +  +E+ +R S  L KC  R    +G F L
Sbjct:   85 KRLSDFLEEAREFV--GDGGGPPRWFSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKKLGEIFDIWCLHIPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPNIDLSLILVNPATHVNNFMVQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLDALSNEFSVQRMGGVGGGMLRDVLAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIYSVRAETLILLSGRDHWLLKEEDIDRYSRTLPKCIVRKLDDNGQFPL 368          
The following BLAST results are available for this feature:
BLAST of CX043914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1457_ARATH5.873e-7951.76Acyltransferase-like protein At1g54570, chloroplas... [more]
Y3684_ARATH6.289e-7349.65Acyltransferase-like protein At3g26840, chloroplas... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_14C06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14C06-F12-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043914 ID=CX043914; Name=CX043914; organism=Citrus sinensis; type=EST; length=855bp
AGGTAACGGAAAGAGCTTGAAAGATTACTTTGATGAAGCCGAAGATATGA
TCAAATCGTCATCAGGCGGCGGTCCGCCCCGCTGGTTCTCGCCGTTAGAA
TGCGGGTCCCACACTCGCGATTCTCCTCTCCTCCTCTTTTTGCCTGGGAT
CGACGGTGTTGGACTTGGACTTATAAGACAGCATCAAAGACTTGGAAAGA
TATTTGATATATGGTGCTTGCATATTCCAGTTAAGGATCGGACATCATTT
ACAGGTCTAGTAAAGCTGGTTGAAAGCACTGTAAGGTCAGAGAGTAACCG
TTCACCAAAGAGGCCCGTATATCTTGTTGGAGAATCTCTTGGAGCTTGCA
TTGCACTTGCTGTCGCAGCCCGCAATCCTGACATCGATCTTGTACTAATT
TTGGTCAATCCAGCAACATCTTTCAATAAGTCAGTGCTGCAATCCTCAAT
ACCTTTACTTGAGCTCATACCAGGCCAAATAACAACTATGCTGTCATCTA
CTTTGAGCTTAATGACAGGTGATCCTTTAAAGATGGCAATGGACAATGTG
GCGAAACGGCTCTCTTTGCAACCAACAATACAAGATCTATCACAGGATCT
CGTTGCTATCTCATCTTACCTTCCTGTTTTGGCAGATATCTTACCCAAGG
AAACACTCCTCTGGAAGATAGAGTTGCTTAAGGCAGCTTCTGCATATGCC
AATTCACGCCTTCATGCTGTAAAAGCTCAAATGCTCGTTCTTTGCAGTGG
AAAGGATCAGCTGATGCCGAGTCAGGAGGAAGGTGAAAGGCTTTCTAGTG
CCCTGCACAAATGCGAACCTCGTAACTTTTACGGCCATGGCCATTTTCTC
TTGTT
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