CX043894

Overview
NameCX043894
Unique NameCX043894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3610 contig Csv1_Contig3610:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043894 vs. ExPASy Swiss-Prot
Match: NUDT9_ARATH (Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9 PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 2.608e-95
Identity = 170/255 (66.67%), Postives = 205/255 (80.39%), Query Frame = 2
Query:   95 SAYKLLLSCPHGFSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVE-SHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQHTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGST--DSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQL 850
            S Y+LLLSCP G S SQVSV F  S+DR+P  D  LE+SIS++W+ R Q N SLFNGQKFRYGG+ +  + GS+ E  HVCL LGLTDYRTFVGTNL+ LWEKFLV SEDD ++C+HT+SPLGNGAV+ETSDKKI++L+RSNNVGEFPGH+VFPGGHPEP   GI  H   +     E +N KV+QEMFDSI  EVVEE G+P+ SL +PLFIGISRR LNVRPA FF++KCS  S++IQ+LYS+A+DG+ESTQL
Sbjct:   13 SRYQLLLSCPSGLSPSQVSVDFSKSHDRIPRQDPGLEDSISQVWEQRSQGNSSLFNGQKFRYGGYCLDDDDGSTNEVPHVCLRLGLTDYRTFVGTNLSSLWEKFLVTSEDDSVRCRHTSSPLGNGAVIETSDKKIIVLRRSNNVGEFPGHYVFPGGHPEPTAVGIDYHQLENNVQTGEVLNKKVTQEMFDSIICEVVEETGIPASSLSSPLFIGISRRELNVRPAMFFYLKCSHHSDDIQRLYSSAEDGFESTQL 267          
BLAST of CX043894 vs. ExPASy Swiss-Prot
Match: NUD22_RAT (Nucleoside diphosphate-linked moiety X motif 22 OS=Rattus norvegicus GN=Nudt22 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.657e-31
Identity = 92/255 (36.08%), Postives = 133/255 (52.16%), Query Frame = 2
Query:   92 DSAYKLLLSCPHG-FSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQ-HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNEIQQLY-STAQDGYEST 844
            D    L+L CP G  S  QVSV    ++DR P P+   + +I+ IW++R+Q    +F+  KFR     +     SS E  + LHLGLT YR F+GTN +            D    Q + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ     S P      +     V +E+F S+ +EV +E+ +P  +L  PL +GI+    +  R +A F+++CSL S E++  Y S   +  EST
Sbjct:    2 DPEVSLMLLCPPGGLSQEQVSVELSPAHDRRPLPEG--DKTITAIWETRLQAQPWIFDAPKFRLHSATL---ASSSPEPQLLLHLGLTSYRDFLGTNWSSSASWLRQQGATDWGDKQAYLADPLGVGAALVTADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQALCSGSIP---QHEDLPGELVVRELFSSVLQEVCDEVNLPLHTLSQPLLLGIACNETSAGRASAEFYVQCSLTSEEVRNYYLSGGPEANEST 248          
BLAST of CX043894 vs. ExPASy Swiss-Prot
Match: NUD22_MOUSE (Nucleoside diphosphate-linked moiety X motif 22 OS=Mus musculus GN=Nudt22 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.250e-30
Identity = 92/258 (35.66%), Postives = 133/258 (51.55%), Query Frame = 2
Query:   92 DSAYKLLLSCP-HGFSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQ-HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQ---DAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNEIQQLY-STAQDGYEST 844
            D    LLL CP  G S  QV+V    ++DR P P    + +I+ IW++R Q    +F+  KFR     +     SS E  + LHLGLT YR F+GTN +            D    Q + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ     GI  H       +     V +E+F S+ +E+ +E+ +P  +L  PL +GI+    +  R +A F+++CSL S E++  Y S   + +EST
Sbjct:    2 DPEVSLLLLCPLGGLSQEQVAVELSPAHDRRPLPGG--DKAITAIWETRQQAQPWIFDAPKFRLHSATLVS---SSPEPQLLLHLGLTSYRDFLGTNWSSSASWLRQQGAADWGDKQAYLADPLGVGAALVTADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQALCSGGIPRH------KDLPGLLVVRELFSSVLQEICDEVNLPLHTLSQPLLLGIACNETSAGRASAEFYVQCSLTSEEVRSYYLSGGPEAHEST 248          
BLAST of CX043894 vs. ExPASy Swiss-Prot
Match: NUD22_HUMAN (Nucleoside diphosphate-linked moiety X motif 22 OS=Homo sapiens GN=NUDT22 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.691e-28
Identity = 86/256 (33.59%), Postives = 130/256 (50.78%), Query Frame = 2
Query:   92 DSAYKLLLSCPHG-FSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQ-HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTD-SEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNEIQQLY-STAQDGYEST 844
            D    LLL CP G     Q+      ++DR P P    + +I+ IW++R++    LF+  KFR     +   G    +  + L LGLT YR F+GTN +            D    Q + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ       P GS    +     V  E+F S+ +E+ +E+ +P  +L  PL +GI+R   +  R +A F+++CSL S ++++ Y S   + +EST
Sbjct:    2 DPEVTLLLQCPGGGLPQEQIQAELSPAHDRRPLPGG--DEAITAIWETRLKAQPWLFDAPKFRLHSATLAPIGSRGPQ--LLLRLGLTSYRDFLGTNWSSSAAWLRQQGATDWGDTQAYLADPLGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEPQ----ALCPGGSPQHQDLAGQLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIARNETSAGRASAEFYVQCSLTSEQVRKHYLSGGPEAHEST 249          
BLAST of CX043894 vs. ExPASy Swiss-Prot
Match: NUD22_BOVIN (Nucleoside diphosphate-linked moiety X motif 22 OS=Bos taurus GN=NUDT22 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 88/256 (34.38%), Postives = 129/256 (50.39%), Query Frame = 2
Query:   92 DSAYKLLLSCPHG-FSSSQVSVVFDGSYDRVPHPDTNLENSISEIWDSRVQNNKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNL--NPLWEKFLVPSEDDVIQCQHTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNEIQQLY-STAQDGYEST 844
            D    LLL CP G     QV      +YDR P P    + +I  IW+SR+Q    LFN  KFR     +   G    +  + L LGLT Y+ F+GTN   +  W +    ++    Q  + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ       P      +     V  E+F S+ +E+ +E+ VP  +L  PL +GI+    +  R +A F+++CSL S ++++ Y S   + +EST
Sbjct:    2 DPEVSLLLQCPPGGLPEKQVRAELSPAYDRRPLPGG--DKAIIAIWESRLQAQPWLFNAPKFRLHSATLAPTGLPGPQ--LLLRLGLTSYQDFLGTNWASSAAWLRQQGATDWGDKQA-YLADPLGVGAALATADDFLVFLRRSGQVAEAPGLVDVPGGHPEPQALCPGDSP---LHKDLPGELVVHELFSSVLQEICDEVNVPPLTLSQPLLLGIACNETSAGRASAEFYVQCSLTSEQVRRHYMSGGPEAHEST 249          
The following BLAST results are available for this feature:
BLAST of CX043894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NUDT9_ARATH2.608e-9566.67Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9... [more]
NUD22_RAT2.657e-3136.08Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_MOUSE2.250e-3035.66Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_HUMAN4.691e-2833.59Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_BOVIN8.001e-2834.38Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_14B03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14B03-D6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043894 ID=CX043894; Name=CX043894; organism=Citrus sinensis; type=EST; length=850bp
CAGAAAGAGAAAAAGGGCACCTACTAAAGTTTAAAGAGTAATTTAATCGA
ACAGGTGGCGTGCATTTGGGATTCCAATGGAGCAGGAAGCAGACTCAGCT
TACAAGCTTCTTCTTTCGTGCCCACATGGTTTTTCATCATCTCAGGTCTC
TGTGGTTTTTGATGGATCATATGATAGGGTTCCTCATCCTGACACTAACT
TAGAGAACTCCATTTCTGAGATATGGGATTCAAGGGTTCAGAACAACAAG
TCCTTGTTTAATGGTCAAAAGTTCAGGTATGGAGGGCATATAATGCGAGG
TGAAGGTGGATCCAGCGTAGAATCTCATGTGTGCCTCCATCTTGGATTGA
CAGATTATAGGACTTTTGTGGGTACAAACTTGAATCCTTTGTGGGAGAAG
TTTCTGGTTCCATCAGAAGATGATGTGATCCAATGTCAGCACACTGCAAG
TCCCTTGGGTAATGGTGCAGTGGTAGAGACATCTGACAAGAAAATACTCT
TGTTGCAAAGAAGTAATAATGTTGGCGAATTTCCTGGGCACTTTGTCTTT
CCAGGAGGCCATCCAGAGCCCCAAGATGCTGGAATTACATCTCATCCGTG
TGGGTCAACAGACTCTGAGTTTATAAACCACAAGGTTTCTCAAGAAATGT
TTGACAGCATTACTCGCGAAGTGGTTGAAGAAATTGGAGTACCTTCAGAA
TCTCTTTGCAACCCACTTTTCATTGGTATATCCCGCAGGCGTTTGAATGT
TAGACCAGCTGCTTTTTTCTTCATAAAATGCAGTCTTCAGTCAAACGAAA
TTCAACAGTTGTATTCTACCGCACAAGATGGCTATGAATCAACCCAACTT
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