CX043882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043882 vs. ExPASy Swiss-Prot
Match: TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.554e-26 Identity = 73/150 (48.67%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 199 EKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSVRNMVAPRNWESMNLFPQQAGFA------PKNDTPNMIDSSLN-KPAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLS 627 +K SFSQTCS LSQYLKE GSFGDLSLG++ + NG R+P TTM+LFP + S D V+++ + NLFP+Q F+ PK D M ++ + KP QTA +TIFY GQVI FNDF A+KA E++ LAS G++ S Sbjct: 19 KKPSFSQTCSRLSQYLKENGSFGDLSLGMACKPDVNGTLGNSRQP-TTTMSLFP-CEASNMDSMVQDV------KPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANS 160
BLAST of CX043882 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.033e-22 Identity = 70/198 (35.35%), Postives = 102/198 (51.52%), Query Frame = 1 Query: 202 KSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSVRNMVAPRNWESMNLFPQQAGFAPKNDTPNMIDSSLNK-------PAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKSPV------ESTPPVSPGPPKILTE 756 K SFSQTC+ LS+YLKE GSFGDLSLG++ + NG P T MNLFP + SG D S + + +FP+Q+ F+ + + D + K P Q+A +TIFYGG+V+ F+DF A+KA E++ LA+ GS+ S + Y+ + +PV + P+ P P + E Sbjct: 15 KPSFSQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGSRQP-----TMMNLFPC-EASGMDSSA----GQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYSQKEIASSPNPVCSPAKTAAQEPIQPNPASLACE 202
BLAST of CX043882 vs. ExPASy Swiss-Prot
Match: TI11B_ARATH (Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11B PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.040e-14 Identity = 52/149 (34.90%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 196 PEKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSVRNMVA--PRNWESMNLFPQQAGFAPKNDTPNMID-SSLNKPAPQT--AQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLS 627 PEKS+FSQ CSLLS+YLKE GSFG++++G++ + + L D GQ ++ + R ++ + F D ID S K AP++ +Q+TIF+GG+V+ FN+FP DKA EIM++A + ++ Sbjct: 7 PEKSNFSQRCSLLSRYLKEKGSFGNINMGLARK---------------SDLELAGKFDLKGQQNVIKKVETSETRPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGGKVMVFNEFPEDKAKEIMEVAKEANHVA 140 The following BLAST results are available for this feature:
BLAST of CX043882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043882 ID=CX043882; Name=CX043882; organism=Citrus sinensis; type=EST; length=864bpback to top |