CX043880

Overview
NameCX043880
Unique NameCX043880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3335 contig Csv1_Contig3335:399..1266. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.159e-64
Identity = 119/191 (62.30%), Postives = 149/191 (78.01%), Query Frame = -3
Query:  227 DSKTFA----TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVVEEAWSGI 787
            DS  FA    T+ NLP PF N + ++ DF  +  N  + VALSGGHT+G+AHCP+FT+RLYP QDPT+++ FAN+LK+TCPT++S+NT V DIRSP+VFDNKYYVDLMNRQGL TSDQDL+ DKRTR IV SFA+DQ LFF  F  +MIKM Q+SVLTG QGEIR+ CS +N+ +  SV+E+ +EEA S I
Sbjct:  168 DSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCPTANSSNTQVNDIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARNTQSFMSVLEEGIEEAISMI 358          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.959e-33
Identity = 83/187 (44.39%), Postives = 113/187 (60.43%), Query Frame = -3
Query:  233 NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTD---KRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS-NNLASVVEDVVEEAWS 760
            NLP+PF     + + F+    + A + VALSGGHT G   C    +RLY        DPTLDK++ + L+K CP + + +  V FD+R+P +FDNKYYV+L   +GL+ SDQ+L++      T  +V  +A  Q  FF  FA +MI+MS LS LTGKQGEIR  C V NS + +  VVED +E A S
Sbjct:  159 NLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVNSKSKIMDVVEDALEFASS 345          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.352e-32
Identity = 71/166 (42.77%), Postives = 95/166 (57.23%), Query Frame = -3
Query:  284 VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRS-IVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 763
            VNLPSPF N T +++DFR K  N ++ V LSGGHT+G+ HCP  TNRLY        DP+LD  +A  L+K C  +D+      D  S   FD  Y+  +  R+GL  SD  L  + +TR+ ++       S+FF +F  SM+KM +  VLTGK GEIR  C   N
Sbjct:  156 VNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKCKPTDTTTALEMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDNSKTRAYVLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCRSAN 321          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 9.352e-32
Identity = 68/160 (42.50%), Postives = 99/160 (61.88%), Query Frame = -3
Query:  284 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT-SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 760
            +LP+PF N + +++ F  K F  +E V LSG HT+G A C AF  R+Y   +  +D T+A +L+  CP+     N + FD+ +PN FDN YY++L N++GLL SDQ L+    T S VT+++ + + F  +F N+MIKM  LS LTG  G+IR  C   N
Sbjct:  159 DLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIY--NESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.062e-31
Identity = 78/185 (42.16%), Postives = 111/185 (60.00%), Query Frame = -3
Query:  239 NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS-NNLASVVEDVVEEA 760
            NLP P S    + + F+    + + + VALSGGHT G + C    +RLY        DPTLDK++   L+K CP + + +  V FD+R+P +FDNKYYV+L   +GL+ SDQ+L++      T  +V ++A  Q  FF  F  ++I+MS LS LTGKQGEIR  C V NS + +  VV+D +E A
Sbjct:  159 NLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCRVVNSKSKIMDVVDDALEFA 343          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.917e-31
Identity = 65/153 (42.48%), Postives = 97/153 (63.40%), Query Frame = -3
Query:  284 TVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-KQDPTLDKTFANNLKKTCPTSDSNNTTV--FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 733
            + +++ F  ++ +  + V+LSG HT G+AHCPAF +R    + +P +D  FA  L+  C   + + T     D+R+P+VFDNKYY DL+ RQGL  SDQ L     T+ + T F+++Q  FF++FA SM KMS + +LTG +GEIR  C+V N
Sbjct:    1 STLISSFANRSLDVADLVSLSGAHTFGVAHCPAFEDRSSRVRHNPAIDGKFATALRNKCSGDNPSGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHPTTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEIRNNCAVPN 153          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.034e-30
Identity = 74/178 (41.57%), Postives = 100/178 (56.18%), Query Frame = -3
Query:  251 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNN-TTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLY--TDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDV 760
            +LPSPF     I + F        + V+LSG HT G   C  F NRL+        DPTL+ T  ++L++ CP + SN   T  D+ +P+ FDN Y+ +L +  GLL SDQ+L+  T   T  IV SFA +Q+LFF+ F  SMIKM  +S LTG  GEIR  C V N  + A+   D+
Sbjct:  168 SLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVNGQSSATEAGDI 345          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.350e-30
Identity = 70/160 (43.75%), Postives = 98/160 (61.25%), Query Frame = -3
Query:  284 LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNT-TVF-DIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 757
            LP P    + +++ F  + F+ +E VALSG HT+G +HC  FTNR+ P      +  FA  LKK C  S ++ T +VF D+ +PN FDN Y+ ++    GLL SD  L++D RTR  V  +A DQS FF +FA +M K+S   VLTG++GEIR +C   N
Sbjct:  169 LPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.764e-30
Identity = 74/169 (43.79%), Postives = 99/169 (58.58%), Query Frame = -3
Query:  278 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNT-TVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLY--TDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSN 760
            ++PSP  + + I   F     N  + VALSG HT G A C  F NRL+        DPTL+ T  + L++ CP + S +T T  D+ +P+ FDN Y+ +L +  GLL SDQ+L+  T   T +IVTSFA +Q+LFFQ FA SMI M  +S LTG  GEIR  C   N +
Sbjct:  167 SIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVNGS 335          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.303e-30
Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = -3
Query:  296 LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPTSDSNNT-TVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTD--KRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 757
            +PSPF   + I + F     N  + VALSG HT G A C  F NRL+        DPTL+ T  ++L++ CP + S +T T  D+ +P+ FDN Y+ +L +  GLL SDQ+L++     T ++VTSFA +Q+LFFQ FA SMI M  +S LTG  GEIR  C
Sbjct:  138 IPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 299          
The following BLAST results are available for this feature:
BLAST of CX043880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER12_ARATH4.159e-6462.30Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER37_ARATH4.959e-3344.39Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER27_ARATH9.352e-3242.77Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER1_ARAHY9.352e-3242.50Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER38_ARATH6.062e-3142.16Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER2_HORVU7.917e-3142.48Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PER54_ARATH1.034e-3041.57Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER63_ARATH1.350e-3043.75Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER53_ARATH1.764e-3043.79Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PERA2_ARMRU2.303e-3044.44Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14A06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14A06-B12-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043880 ID=CX043880; Name=CX043880; organism=Citrus sinensis; type=EST; length=864bp
TACCGGGCCCCCTTTTGCCAAACTTTATGAAATATGAACAACATACTGTT
ATTTAGAATTGCTAATTTGATTACTAGTGAACATATATACTAACTGGCAA
GTAGCTTTATTGACAGAATTCAAACTAGACAAGCGCAAGCAAGACAACGA
AACAAAACAGACTAACACAAAGAAACAAGCAACGTTAACCGGAACCTGAG
GCTAGGTGGGTAGCTAGATTTTAGATAATCCCAGACCAAGCCTCTTCAAC
TACATCCTCAACAACAGAAGCCAAATTATTGGAATTCTTGACGGAGCACT
TGGCTCTAATCTCTCCTTGCTTCCCCGTGAGCACACTCAACTGCGACATC
TTTATCATCGAATTGGCAAACTCTTGAAAGAAGAGTGACTGGTCCACAGC
AAAGCTCGTGACAATGCTCCTCGTTCTCTTGTCCGTGTAAAGATCCTGGT
CCGACGTCAGCAACCCCTGTCGGTTCATCAAGTCAACGTAGTACTTGTTG
TCGAACACGTTCGGGGACCGGATGTCGAAGACGGTGGTGTTGTTGGAATC
CGAAGTGGGGCATGTCTTTTTGAGATTGTTGGCGAATGTTTTGTCCAGTG
TGGGGTCTTGTTTGGGATAGAGGCGATTGGTGAATGCAGGGCAGTGAGCT
AGCCCAACGGTGTGCCCGCCGGAGAGGGCCACGGTTTCCCTGGCGTTGAA
GGTTTTTTCTCGGAAATCGTTGAGGATCACGGTGGTGTTGCTGAACGGTG
ATGGCAGATTTACCACTGTTGCGAATGTTTTGCTGTCGAATAGCTCAGAT
GGCGAGGAAGCGACGAAGATGGTGATGAGGAAACAAAAAGGCGGCTGGAA
AATTGATTTTTCTG
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