CX043877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.856e-29 Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 1 Query: 496 QCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNF 744 QC+NGH+AC+ CC+K+ N+CPSC PIGY RCRA+EKV+E+ +V+C N+ YGCK + SYG + HE++C PCSCPI DC++ Sbjct: 126 QCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHY 208
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27 Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 430 LNCLMTYHENKSDILMHSWIAIQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNF 744 L+C + Y K + QC NGH+ACS+CC K+ NKCP+C P+G+ RCRA+E+VLESV V CR ++ GC T+ YG++ HEKIC PCSCP+ CN+ Sbjct: 43 LDCPICYQALKIPVF-------QCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNY 140
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SINL7_ARATH (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27 Identity = 47/83 (56.63%), Postives = 63/83 (75.90%), Query Frame = 1 Query: 496 QCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNF 744 QC+NGH+ACS+CC K+ NKCP+C +P+G+NRCRA+E VLES+ + C N+ GCK +SYGK+ HEK C C+CP DCN+ Sbjct: 64 QCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNY 146
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SINL2_ARATH (E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana GN=At1g66620 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.949e-24 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 430 LNCLMTYHENKSDILMHSWIAIQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNF 744 L+C + H S I QC+NGHIACS+CC+K+ NKCPSC PIG R R +E+V+E+V VTC N +GC SYGK+ HEK C C CP P+CN+ Sbjct: 42 LDCPICCHALTSPIF-------QCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCPAPNCNY 139
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SINL4_ARATH (E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana GN=At1g66650 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.825e-22 Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 496 QCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKK-HDHEKICPHVPCSCPIPDCNF 744 QC NGH+AC CC K+ +C C PIG RCRA+EKV+++ V+C N+ YGCK + +YG + HEK+C PCSCPI DCN+ Sbjct: 99 QCNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEKVIKAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCNY 182
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SINL9_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana GN=At5g37910 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.112e-22 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 496 QCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNF 744 QC+NGH+AC +CC K+ NKCP+C P+G++R RA+E VLES+ + C N +GC + YGK+ HEK C CSCP C++ Sbjct: 51 QCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDY 133
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SINL5_ARATH (E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana GN=At1g66660 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.112e-22 Identity = 43/83 (51.81%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 496 QCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNF 744 QC NGH+ACS+CC K+ KC C IG RCRA+EKV+E+ V C N+ +GCK T +Y + HEK+C V CSCP+ +CN+ Sbjct: 99 QCSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPVSNCNY 181
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SINL3_ARATH (E3 ubiquitin-protein ligase SINA-like 3 OS=Arabidopsis thaliana GN=At1g66630 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.869e-21 Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 1 Query: 412 LMYFGTLNCLMTYHENKSDILMHSWIAIQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHD--HEKICPHVPCSCPIPDCNF 744 L+ L+C + YH+ + I QC+NGHIACS+CC K+ KCP C IG+ R R +EK++E+V V+C N+ YGC + Y + + HE++C C CP P+C + Sbjct: 41 LLELDLLDCPICYHKLGAPIY-------QCDNGHIACSSCCKKVKYKCPYCSLRIGFFRSRILEKIVEAVVVSCPNAKYGCTEKIPYDNESESAHERVCEFTLCYCPEPECKY 146
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SIL11_ARATH (E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 8.475e-20 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 496 QCENGHIACSTCCSKIMNKCPS--CCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNF 744 QC++GHI C+ C +K+ NKCP C PIG RC A+E+VLES V C+N+ +GC ++SY K HEK C + CSCP +CN+ Sbjct: 56 QCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNY 140
BLAST of CX043877 vs. ExPASy Swiss-Prot
Match: SINL8_ARATH (E3 ubiquitin-protein ligase SINA-like 8 OS=Arabidopsis thaliana GN=At5g37900 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.726e-18 Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 496 QCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNF 744 QCENGH+ACS+CC K+ NKCP+C +E +LES+ VTC N +GC + YGKK HE+ C CSCP DC + Sbjct: 48 QCENGHLACSSCCPKLRNKCPAC----------PMENILESILVTCPNDMFGCTESFLYGKKSTHEEECIFSLCSCPSLDCEY 120 The following BLAST results are available for this feature:
BLAST of CX043877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043877 ID=CX043877; Name=CX043877; organism=Citrus sinensis; type=EST; length=745bpback to top |