CX043843

Overview
NameCX043843
Unique NameCX043843
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2617 contig Csv1_Contig2617:15..778. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.534e-80
Identity = 145/243 (59.67%), Postives = 187/243 (76.95%), Query Frame = 1
Query:   46 EQKMAQIGSSLLVPCVQELVKNPALV-VPDRYIRPDQDSPLISDDTLIS-QIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFE--NGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            E K A   SS+LVP VQE+VK   +  VP RY+R DQD   + DD  +  +IP+IDM+ L S  +MDSE+ KLDF CKEWGFFQLVNHG+ ++FL+K+K E++ FFNL MEEKKK+WQRP ++EGFGQAFVVSE+QKLDWADLF     PV LRKPHLFPKLP   R+TLE+YS E++++A+ LI+KM   L IK EE+ + F+  + +Q MRMNYYPPCPQP++V+GL+PHSD+  LT+L+Q
Sbjct:    2 EAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQ 244          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.364e-43
Identity = 99/240 (41.25%), Postives = 138/240 (57.50%), Query Frame = 1
Query:   49 QKMAQIGSSLLVPCVQELVKNPALVVPDRYIRPD--QDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            + +  +G SL V  VQ L       +P+RY+RP+   D  +  D++L  +IPVID+  L  ++    ELAK    C +WGFFQL+NHG+    +EK+K + E FF L  +EK  Y Q P  MEG+GQAFV SEEQKLDWAD+  ++T PV  R    +P  P S RET+E YSMEL+ +A  L   M + L ++ E + +     +        P      + +GLSPHSDA  LT+L+Q
Sbjct:    3 KNLTGVGGSLPVENVQVLAGKELKNLPNRYVRPELEHDDVVPIDNSL--EIPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRT-VFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQ 239          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30
Identity = 75/236 (31.78%), Postives = 125/236 (52.97%), Query Frame = 1
Query:   91 VQELVKNPALVVPDRYIRPDQDSPLISDDTLIS------QIPVIDMQSLHSEESMDSE--LAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMRE---FFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 759
            V+ L K+  + +P  YIRP ++   I+D  L        Q+P ID++++ S++    E  + +L     +WG   L+NHG+    +E++KK  E FF+LS+EEK+KY   Q  G ++G+G     +   +L+W D F  +  P   R   ++PK P    E    Y+  L+ LA  +   +   L ++ + + +     E  L  M++NYYP CPQPE  +G+  H+D +ALT +L
Sbjct:    7 VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 242          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.507e-27
Identity = 75/244 (30.74%), Postives = 122/244 (50.00%), Query Frame = 1
Query:   79 LVPCVQELVKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQSLHSEESM------DSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMRE---FFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 759
            + P V+ L  +    +P  YIRP ++   I +           Q+P ID++ + SE+ +      +    +L     EWG   LVNHG+S   + ++K   E FFNL MEEK+KY   Q  G + G+G     +   +L+W D F  +  P   R   ++PK P         YS++L++LA  ++S +   L +++  + +     E  L   ++NYYP CPQPE  +G+  H+D +ALT +L
Sbjct:    5 VAPRVESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFIL 248          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.968e-27
Identity = 61/211 (28.91%), Postives = 114/211 (54.03%), Query Frame = 1
Query:  136 YIRPDQDSPLISDDTLISQIPVIDMQSLHSE-ESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            ++R + + P ++ +   ++IP+I +  L  + +    E+  K+   C++WG FQ+V+HG+ +  + ++ +    FF L  EEK +Y    G   GF  + V+  +  +DW +  +  + P++ R    +PK P   R T EVYS +L  L   L+  + E + ++  ++ +   +  Q + +NYYP CPQP+  +G+  H+D   +TILLQ
Sbjct:   19 FVRDEDERPKVAYNQFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQ 229          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.479e-27
Identity = 71/235 (30.21%), Postives = 120/235 (51.06%), Query Frame = 1
Query:   91 VQELVKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQSLHSEESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREF---FENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 759
            V+ L K+    +P  Y+RP ++   I +           Q+P ID++ + SE+    E   +L     EWG   LVNHG+S   + ++K   E FF+  +EEK+KY   Q  G+++G+G     S   +L+W D F     P   R   ++PK P         Y+ +++ LA  +++ +   L +++  + +     E+ L  M++NYYP CPQPE  +G+  H+D +ALT +L
Sbjct:   12 VESLAKSGIQAIPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 246          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.176e-26
Identity = 68/239 (28.45%), Postives = 120/239 (50.21%), Query Frame = 1
Query:   85 PCVQELVKNPALVVPDRYIRPDQDSPLISDDTLIS-------QIPVIDMQSLHS--EESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 759
            P V+EL ++    +P  Y+RP+++   I  + L         Q+P ID++ + S  EE       +L     +WG   L+NHG+    ++++K   + FF L +EEK+ Y   Q  G+++G+G     +   +L+W D F     P H     ++P  PP        Y+ +L+ LA  ++S +   L ++   + +     E+ +  M++N+YP CPQPE  +G   H+D +ALT +L
Sbjct:   10 PRVEELARSGLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFIL 248          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.176e-26
Identity = 71/236 (30.08%), Postives = 121/236 (51.27%), Query Frame = 1
Query:   91 VQELVKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQSLHSE-ESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREF---FENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 759
            V+ L  +    +P  YIRP  +   I D      +    Q+P ID++ + S+ E + ++   KL     +WG   LVNHG+S   ++K++K  + FF+L +E+K+KY   Q  G ++G+G     +   +L+W D F     P   R   ++P+ P    E    Y+ +L+ LA  ++  +   L + +  + +     E  L  M++NYYP CPQPE  +G+  H+D +ALT +L
Sbjct:   11 VETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 246          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.269e-26
Identity = 68/219 (31.05%), Postives = 118/219 (53.88%), Query Frame = 1
Query:  124 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQSLHS-EESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFN-LSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 759
            +P  YIR + + P  +    ++ ++PVID+ ++   EE +  E+ +     KEWG FQ++NHG+    +E L+K  + FF  +  EEK+   ++PG   +EG+G +     E K  W D       P        +PK PPS RE  E Y+  L+ +A+ +   +   L ++  EM E    E+ +  +++NYYPPCP+P+  +G+  H+D + +T+L+
Sbjct:   33 IPSEYIRSENEQPAATTLQGVVLEVPVIDISNVDDDEEKLVKEIVEAS---KEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLV 248          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.410e-25
Identity = 69/234 (29.49%), Postives = 120/234 (51.28%), Query Frame = 1
Query:  100 LVKNPALV-----VPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKL-DFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLR-------ETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            L+ NP+++     +P+++I PD + P I+   L   +P+ID+Q+L S+ S   + ++L    CK+ GFF +VNHG+S   +    +    FF++ + EK++  ++ G+  G+  +F      KL W +  S        R   +      +L        +  + Y   + +L+  ++  +G  L +K +  REFFE     MR+NYYPPC +P+  +G  PH D  +LTIL Q
Sbjct:   27 LIFNPSMLNLQANIPNQFIWPDDEKPSIN--VLELDVPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQ 258          
The following BLAST results are available for this feature:
BLAST of CX043843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
SRG1_ARATH1.534e-8059.67Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA4.364e-4341.25S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_ARATH1.115e-3031.78Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_VITVI1.507e-2730.74Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
FNSI_PETCR1.968e-2728.91Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
LDOX_PETHY7.479e-2730.21Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_PERFR2.176e-2628.45Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_MALDO2.176e-2630.08Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_SOLTU8.269e-2631.05Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
GAOX1_ARATH1.410e-2529.49Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13G06_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13G06-N11-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043843 ID=CX043843; Name=CX043843; organism=Citrus sinensis; type=EST; length=764bp
TTCCAAAATCAATACAAAGCTGCAGCAATCTTGAAAGGATTTGAGGAACA
AAAGATGGCCCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGT
TGGTCAAGAATCCGGCGTTAGTTGTCCCCGACAGATACATACGTCCAGAT
CAAGATTCACCCCTCATTTCTGATGATACTTTGATTTCACAGATACCAGT
TATTGACATGCAAAGCTTACATTCTGAAGAATCAATGGATTCTGAGTTAG
CCAAGCTCGACTTCGTATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAAT
CATGGAATGAGCACAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGG
ATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAG
GAGATATGGAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAG
CTTGATTGGGCTGACCTTTTCTCCATGATGACTCTTCCAGTTCATCTGAG
GAAACCACATTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGG
AAGTTTACTCAATGGAATTAAAAACCCTAGCCGAGAACCTAATATCGAAA
ATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGA
AAATGGACTGCAAGGAATGAGGATGAATTATTACCCTCCATGTCCTCAGC
CCGAGAAGGTTATGGGCCTGTCGCCGCATTCTGATGCGGCTGCACTTACC
ATTCTGCTACAACT
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