CX043842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043842 vs. ExPASy Swiss-Prot
Match: YI01_SCHPO (Putative amidase C869.01 OS=Schizosaccharomyces pombe GN=SPAC869.01 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.397e-33 Identity = 72/202 (35.64%), Postives = 100/202 (49.50%), Query Frame = 3 Query: 90 LLLGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVSLGTETDGXXXXXXXXXXVVGIKPTVGLTSRAGVIPLTPRQDSVGYVEPLPYQFDGCHL*LTKD*LPCRPICRTVADAVYVLDAIAGFDHNDPAT-SAASKYIPHGGYKQFI-KPHGLKGKRLGVVRNPFFNILKGSSLDQVFD 689 +L G A+LSEWA+ RS++ G+ ARGGQ + P+ L+ +P N++A +LGTETDG VVG+KPTVGLTSR GVIP + QD+ G PI RTV DAVYV ++ G D ND T + K G Y +F+ L+G R G+ + K +D++ + Sbjct: 180 VLFGHATLSEWADMRSNDYSEGYSARGGQSRCPFNLTVNPGGSSSGSAISVASNMIAFALGTETDGSIIDPAMRNGVVGLKPTVGLTSRYGVIPESEHQDTTG------------------------PIARTVRDAVYVFQSMWGIDENDIYTLNQTGKTPEDGDYMKFLSNKTSLEGARFGLPWKRLWQNAKADEIDRLLE 357 HSP 2 Score: 47.3654 bits (111), Expect = 8.397e-33 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 2 Query: 11 AGSYALLGSVVPRDAGVVTKLREAGAITAG 100 AGSYALLGS+VPRDA VV +LREAGA+ G Sbjct: 154 AGSYALLGSIVPRDAYVVKQLREAGAVLFG 183
BLAST of CX043842 vs. ExPASy Swiss-Prot
Match: GATA_MICAN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Microcystis aeruginosa (strain NIES-843) GN=gatA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.244e-13 Identity = 61/198 (30.81%), Postives = 85/198 (42.93%), Query Frame = 3 Query: 90 LLLGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVSLGTETDGXXXXXXXXXXVVGIKPTVGLTSRAGVIPLTPRQDSVGYVEPLPYQFDGCHL*LTKD*LPCRPICRTVADAVYVLDAIAGFDHNDPATSAASKYIPHGGYKQFIKPHGLKGKRLGVVRNPFFNILKGSSLDQV 683 +++GK +L E+A SS +G+ NP+ LS P V+LG++T G VVG+KPT GL SR G++ D +G P RTV DA +L AIAG+D D + S +P Y QF+K LKG ++GV++ F G LDQV Sbjct: 113 VIVGKTNLDEFA-MGSSTENSGYHVTA----NPWDLSRVPGGSSGGSAAAVAAQECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRFGLVAYASSLDQIG------------------------PFGRTVEDAAILLQAIAGYDPQD----STSLNLPIPDYSQFLKT-SLKGLKIGVIKETF-----GEGLDQV 271 HSP 2 Score: 23.483 bits (49), Expect = 2.244e-13 Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 38 VVPRDAGVVTKLREAGAITAGK 103 V P ++ V KLR+ GA+ GK Sbjct: 96 VPPYESTVTQKLRDLGAVIVGK 117
BLAST of CX043842 vs. ExPASy Swiss-Prot
Match: GATA_CYAA5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain ATCC 51142) GN=gatA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.424e-11 Identity = 63/213 (29.58%), Postives = 87/213 (40.85%), Query Frame = 3 Query: 90 LLLGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVSLGTETDGXXXXXXXXXXVVGIKPTVGLTSRAGVIPLTPRQDSVGYVEPLPYQFDGCHL*LTKD*LPCRPICRTVADAVYVLDAIAGFDHNDPATSAASKYIPHGGYKQFIKPHGLKGKRLGVVRNPFFNILKGSSLDQVFD-------HHLQTL 707 +++GK +L E+A SS +G+ NP+ LS P + V+LG++T G VVG+KPT GL SR G++ D +G P R V DA +L AIAG+D D + S P Y QF+KP L+G +GV+ F G LD V HL+TL Sbjct: 113 VMVGKTNLDEFA-MGSSTENSGYQVTA----NPWDLSRVPGGSSGGSAAAVAASECVVALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYASSLDQIG------------------------PFARNVQDAAILLGAIAGYDPKD----STSINTPVPDYTQFLKP-SLEGLTIGVIEETF-----GEGLDPVVSKTVKAAIDHLKTL 286 The following BLAST results are available for this feature:
BLAST of CX043842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043842 ID=CX043842; Name=CX043842; organism=Citrus sinensis; type=EST; length=819bpback to top |